| Gene Symbol | Pcdh18 |
|---|---|
| Gene Name | protocadherin 18, transcript variant X2 |
| Entrez Gene ID | 101708334 |
For more information consult the page for NW_004624777.1 (Scaffold)
The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.
| Protein Percentage | 97.0% |
|---|---|
| CDS Percentage | 93.52% |
| Ka/Ks Ratio | 0.05342 (Ka = 0.014, Ks = 0.2616) |
protocadherin 18
| Protein Percentage | 95.32% |
|---|---|
| CDS Percentage | 91.55% |
| Ka/Ks Ratio | 0.06488 (Ka = 0.0219, Ks = 0.3378) |
protocadherin 18
| Protein Percentage | 91.78% |
|---|---|
| CDS Percentage | 86.19% |
| Ka/Ks Ratio | 0.06232 (Ka = 0.0404, Ks = 0.648) |
| Protein Percentage | 91.43% |
|---|---|
| CDS Percentage | 86.45% |
| Ka/Ks Ratio | 0.07055 (Ka = 0.0424, Ks = 0.6017) |
>XM_004854972.1 ATGCACCAAATGAATACTAAAATGCACTTTAGATTTCTTTTTGCACTCTTAATAGCATCTTTCAACCACGATGTACTGGGCAAGAATTTGAAATACAGGATTTATGAGGAACAGAGGGTTGGATCAGTAATTGCTAGACTATCAGAGGATGTGGCTGATGTTTTATTGAAGCTACCTAATCCGTCTGCCGTTCGTTTCCGAGCCATGCAAAGGGGAAATTCTCTACTTGTGGTGAATGAGAATACCGGGGAAATCAGCATAGGGGCTACAATCGACCGTGAGCAACTATGCCAGAAAAACTTGAACTGTTCCATAGAGTTTGATGTGATCACTCTACCCACGGAGCATCTGCAGCTTTTCCATATTGAAGTTGAAGTGCTAGATATTAATGACAATTCTCCCCAGTTTTCGAGATCTCTCATCCCCATTGAGATATCCGAGAGTGCAGCAGTAGGGACGCGAATTCCTCTGGACAGTGCATTCGATCCAGATGTTGGGGAAAATTCCCTCCACACATACTCCCTCTCTGCCAATGATTTTTTTAATATCGAGGTTCGGACCAGGACGGATGGAGCCAAGTATGCAGAACTCATAGTGGTCAGTGAGTTGGACCGGGAGCTCCAGTCCAGCTATGAGCTCCAGCTCACTGCCTCTGACATGGGGGTGCCTCAGAGGTCTGGCTCGTCCCTACTGAAAATCAGTATTTCAGACTCCAATGACAACAGCCCTGCCTTTGAGCAGCAGTCTTACATAATACAACTCTTAGAAAACTCTCCTGTTGGCACTTTGCTCTTGGACCTGAATGCCACTGATCCAGATGAGGGCGCTAATGGGAAAATTGTCTATTCCTTCAGCAGTCATGTGTCTCCCAAAATTATAGAGACTTTTAAAATTGATTCTGAAAGAGGACATTTGACCCTGTTCAAGCAAGTGGATTATGAAATCACCAAATCATATGAGATTGATGTTCAAGCTCAAGATTTGGGACCCAATTCAATCCCAGCTCATTGCAAAATTATAATTAATGTTGTGGATGTTAATGATAATAAACCTGAAATTAACATAAACCTCATGTCCCCTGGAAAAGAAGAAATATCTTATATTTTTGAAGGGGATCCTATTGACACATTTGTGGCATTGGTCAGGGTACAGGACAAAGATTCTGGGCTGAATGGAGAAATAGTTTGTAAGCTTCATGGACATGGTCACTTTAAACTCCAGCAGACCTATGAAAACAATTATTTAATCTTGACCAATGCTACACTGGATAGAGAAAGGAGATCTGAATATAGCTTGACTGTTATTGCTGAGGACAAGGGGACACCCAGTCTCTCTTCAGTGAAACATTTTACTGTTCAAATCAATGATATTAATGACAATCCACCCCGCTTCCAGAGAAGCCAATATGAGTTTGTGATCTCAGAGAATAACTCGCCGGGGGCATATATCACCACTGTGACAGCCACAGATCTGGATCTTGGAGAAAATGGGCAAGTGACATACACCATTTTGGAGACTTTTGTCCTGGAAAGTTCTGTCACTACATATGTAACCATTGACCCATCTAATGGAGCCATCTATGCACTCAGAATCTTTGACTATGAGGAAGTGAGTCAGATCACTTTTGTGGTAGAAGCAAGAGATGGAGGGAGTCCAAAGCAACTGGTAAGCAACACCACAGTTGTGCTTACTATCATTGATGAAAATGACAATGTTCCTGTGGTCATAAGGCCTGTGCTCCACAATAATACTGCAGAAATCTCCATCCCCAAAGAGGCTGAAAGTGGCTTTCATGTCACAAGAATAAGGGCAATTGACAGAGACTCTGGTGTAAATGCTGAACTCAGCTGCTCCATAGTAGCAGGTAATGAGGAAAGTATCTTCCTAATTGATCCACGATCTTGTGACATCCATACCAATGTGAGCATGGACTCTGTCCCGTACACTGAATGGGAGCTCTCAGTCATCATCCAGGACAAAGGCAATCCTCAGCTGCATACCAAAGTACTCCTGAAGTGCATGATCTTTGAATATGCAGAATCTGTGACAAGCACAGCAATGACTTTAGTAAGCCAGGGCTCCTTGGATGTCTCCATGATTATAATTATTTCCTTGGGAGCAATTTGTGCAGTGCTGTTGGTTATTATGGTGCTATTTGCAACTAGGTATAACCGGGAAAAGAAAGACACAAGATCCTACAACTGCAGGGTAGCAGAATCAACTTACCAGCACCACCCAAAAAGACCATCCAGGCAGATCCACAAAGGAGACATCACATTGGTGCCCACCATCAATGGCACTCTGCCCATCAGATCTCATCACAGATCATCCCCATCTTCATCTCCGACCTTAGAAAGAGGGCAGATGGGCAGCCGCCAGAGTCACAACAGTCACCAGTCACTCAACAGTTTGGTGACAATCTCCTCAAACCACGTGCCAGAGAATTTCTCATTAGAACTCACTCATGCCACTCCTGCTGTTGAGGTATCCCAGCTTCTGTCAATGCTTCACCAGGGCCAGTATCAGCCACGGCCCAGCTTTCGAGGAAACAAATATTCCAGGAGCTATAGATATGCCCTCCAAGATATGGACAAATTTAGCTTGAAAGACAGTGGCCGTGGTGACAGCGAAGCAGGAGACAGTGATTATGATTTGGGGCGAGATTCTCCCATAGATAGGCTGCTGGGTGAAGGATTCAGTGACCTGTTTCTTACAGATGGAAGAATTCCAGCAGTTTTGAGTCCCGCTGAGTATAATAACGAGTCCTCATTGCTTTCCTCGAGTGCAGCTATGAGGCTGTGCACGGAAGAGTGCAGGGTCCTGGGACACTCTGACCAGTGCTGGATGCCACCGCTGCACTCACCGTCCTCGGATTATAGGAGCAACATGTTCATCCCAGGGGAAGAATTTCCAGCCCAACCTCAGCAGCAGCACCCCCATCCAAATCTCGACGACGACAACCAGCACGCAGAAACTGGGGACAAGAAGAAGAGTTTTTCCACCTTTGGGAAGGACTCGCCAAACGATGGCACTGGGGACACCAGCACATCCTCCCTGCTCTCAGAAATGAGCAGCGTCTTCCAGCGCCTTTTACCCCCTTCTATGGACACATATCCTGAGTGCAGCGAGGTGGATCGGTCCAACTCCCTGGAGCGCCGGAAGGGACCAGTGCCAGCGAAAACTGCGGGGTACCCACAAGGGGTGGCAGCCTGGGCAGCCAGCACACACTTTCAGAATCCCACCACCACCTCTGCGTCTCCACTCGGAACTCACTCCAGTGTGCAGCCTTCTTCAAAGTGGCTGCCAGCCATGGAGGAGATCCCAGAAAATTATGAAGAGGATGATTTTGACAATGTGCTCAACCACCTTAATGATGGGAAGCATGAACTCATGGACGCCAGCGAGCTAGTGGCTGAGATTAACAAACTGCTTCAGGATGTTCGCCAGAGCTAG
Pcdh18 PREDICTED: protocadherin-18-like isoform X2 [Heterocephalus glaber]
Length: 1150 aa View alignments>XP_004855029.1 MHQMNTKMHFRFLFALLIASFNHDVLGKNLKYRIYEEQRVGSVIARLSEDVADVLLKLPNPSAVRFRAMQRGNSLLVVNENTGEISIGATIDREQLCQKNLNCSIEFDVITLPTEHLQLFHIEVEVLDINDNSPQFSRSLIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSANDFFNIEVRTRTDGAKYAELIVVSELDRELQSSYELQLTASDMGVPQRSGSSLLKISISDSNDNSPAFEQQSYIIQLLENSPVGTLLLDLNATDPDEGANGKIVYSFSSHVSPKIIETFKIDSERGHLTLFKQVDYEITKSYEIDVQAQDLGPNSIPAHCKIIINVVDVNDNKPEININLMSPGKEEISYIFEGDPIDTFVALVRVQDKDSGLNGEIVCKLHGHGHFKLQQTYENNYLILTNATLDRERRSEYSLTVIAEDKGTPSLSSVKHFTVQINDINDNPPRFQRSQYEFVISENNSPGAYITTVTATDLDLGENGQVTYTILETFVLESSVTTYVTIDPSNGAIYALRIFDYEEVSQITFVVEARDGGSPKQLVSNTTVVLTIIDENDNVPVVIRPVLHNNTAEISIPKEAESGFHVTRIRAIDRDSGVNAELSCSIVAGNEESIFLIDPRSCDIHTNVSMDSVPYTEWELSVIIQDKGNPQLHTKVLLKCMIFEYAESVTSTAMTLVSQGSLDVSMIIIISLGAICAVLLVIMVLFATRYNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHRSSPSSSPTLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVEVSQLLSMLHQGQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGEGFSDLFLTDGRIPAVLSPAEYNNESSLLSSSAAMRLCTEECRVLGHSDQCWMPPLHSPSSDYRSNMFIPGEEFPAQPQQQHPHPNLDDDNQHAETGDKKKSFSTFGKDSPNDGTGDTSTSSLLSEMSSVFQRLLPPSMDTYPECSEVDRSNSLERRKGPVPAKTAGYPQGVAAWAASTHFQNPTTTSASPLGTHSSVQPSSKWLPAMEEIPENYEEDDFDNVLNHLNDGKHELMDASELVAEINKLLQDVRQS