Sequence details NCBI ID: XM_004854971.1 (Coding sequence)

Details from NCBI annotation

Gene Symbol Pcdh18
Gene Name protocadherin 18, transcript variant X1
Entrez Gene ID 101708334

Database interlinks

Part of NW_004624777.1 (Scaffold)

For more information consult the page for NW_004624777.1 (Scaffold)

Genome Location

Sequence Coding sequence

Length: 3456 bp    Location: 17982067..17970807   Strand: -
Raw sequence   
>XM_004854971.1
ATGCACCAAATGAATACTAAAATGCACTTTAGATTTCTTTTTGCACTCTTAATAGCATCTTTCAACCACGATGTACTGGGCAAGAATTTGAAATACAGGATTTATGAGGAACAGAGGGTTGGATCAGTAATTGCTAGACTATCAGAGGATGTGGCTGATGTTTTATTGAAGCTACCTAATCCGTCTGCCGTTCGTTTCCGAGCCATGCAAAGGGGAAATTCTCTACTTGTGGTGAATGAGAATACCGGGGAAATCAGCATAGGGGCTACAATCGACCGTGAGCAACTATGCCAGAAAAACTTGAACTGTTCCATAGAGTTTGATGTGATCACTCTACCCACGGAGCATCTGCAGCTTTTCCATATTGAAGTTGAAGTGCTAGATATTAATGACAATTCTCCCCAGTTTTCGAGATCTCTCATCCCCATTGAGATATCCGAGAGTGCAGCAGTAGGGACGCGAATTCCTCTGGACAGTGCATTCGATCCAGATGTTGGGGAAAATTCCCTCCACACATACTCCCTCTCTGCCAATGATTTTTTTAATATCGAGGTTCGGACCAGGACGGATGGAGCCAAGTATGCAGAACTCATAGTGGTCAGTGAGTTGGACCGGGAGCTCCAGTCCAGCTATGAGCTCCAGCTCACTGCCTCTGACATGGGGGTGCCTCAGAGGTCTGGCTCGTCCCTACTGAAAATCAGTATTTCAGACTCCAATGACAACAGCCCTGCCTTTGAGCAGCAGTCTTACATAATACAACTCTTAGAAAACTCTCCTGTTGGCACTTTGCTCTTGGACCTGAATGCCACTGATCCAGATGAGGGCGCTAATGGGAAAATTGTCTATTCCTTCAGCAGTCATGTGTCTCCCAAAATTATAGAGACTTTTAAAATTGATTCTGAAAGAGGACATTTGACCCTGTTCAAGCAAGTGGATTATGAAATCACCAAATCATATGAGATTGATGTTCAAGCTCAAGATTTGGGACCCAATTCAATCCCAGCTCATTGCAAAATTATAATTAATGTTGTGGATGTTAATGATAATAAACCTGAAATTAACATAAACCTCATGTCCCCTGGAAAAGAAGAAATATCTTATATTTTTGAAGGGGATCCTATTGACACATTTGTGGCATTGGTCAGGGTACAGGACAAAGATTCTGGGCTGAATGGAGAAATAGTTTGTAAGCTTCATGGACATGGTCACTTTAAACTCCAGCAGACCTATGAAAACAATTATTTAATCTTGACCAATGCTACACTGGATAGAGAAAGGAGATCTGAATATAGCTTGACTGTTATTGCTGAGGACAAGGGGACACCCAGTCTCTCTTCAGTGAAACATTTTACTGTTCAAATCAATGATATTAATGACAATCCACCCCGCTTCCAGAGAAGCCAATATGAGTTTGTGATCTCAGAGAATAACTCGCCGGGGGCATATATCACCACTGTGACAGCCACAGATCTGGATCTTGGAGAAAATGGGCAAGTGACATACACCATTTTGGAGACTTTTGTCCTGGAAAGTTCTGTCACTACATATGTAACCATTGACCCATCTAATGGAGCCATCTATGCACTCAGAATCTTTGACTATGAGGAAGTGAGTCAGATCACTTTTGTGGTAGAAGCAAGAGATGGAGGGAGTCCAAAGCAACTGGTAAGCAACACCACAGTTGTGCTTACTATCATTGATGAAAATGACAATGTTCCTGTGGTCATAAGGCCTGTGCTCCACAATAATACTGCAGAAATCTCCATCCCCAAAGAGGCTGAAAGTGGCTTTCATGTCACAAGAATAAGGGCAATTGACAGAGACTCTGGTGTAAATGCTGAACTCAGCTGCTCCATAGTAGCAGGTAATGAGGAAAGTATCTTCCTAATTGATCCACGATCTTGTGACATCCATACCAATGTGAGCATGGACTCTGTCCCGTACACTGAATGGGAGCTCTCAGTCATCATCCAGGACAAAGGCAATCCTCAGCTGCATACCAAAGTACTCCTGAAGTGCATGATCTTTGAATATGCAGAATCTGTGACAAGCACAGCAATGACTTTAGTAAGCCAGGGCTCCTTGGATGTCTCCATGATTATAATTATTTCCTTGGGAGCAATTTGTGCAGTGCTGTTGGTTATTATGGTGCTATTTGCAACTAGGTATAACCGGGAAAAGAAAGACACAAGATCCTACAACTGCAGGGTAGCAGAATCAACTTACCAGCACCACCCAAAAAGACCATCCAGGCAGATCCACAAAGGAGACATCACATTGGTGCCCACCATCAATGGCACTCTGCCCATCAGATCTCATCACAGATCATCCCCATCTTCATCTCCGACCTTAGAAAGAGGGCAGATGGGCAGCCGCCAGAGTCACAACAGTCACCAGTCACTCAACAGTTTGGTGACAATCTCCTCAAACCACGTGCCAGAGAATTTCTCATTAGAACTCACTCATGCCACTCCTGCTGTTGAGCAGGTATCCCAGCTTCTGTCAATGCTTCACCAGGGCCAGTATCAGCCACGGCCCAGCTTTCGAGGAAACAAATATTCCAGGAGCTATAGATATGCCCTCCAAGATATGGACAAATTTAGCTTGAAAGACAGTGGCCGTGGTGACAGCGAAGCAGGAGACAGTGATTATGATTTGGGGCGAGATTCTCCCATAGATAGGCTGCTGGGTGAAGGATTCAGTGACCTGTTTCTTACAGATGGAAGAATTCCAGCAGTTTTGAGTCCCGCTGAGTATAATAACGAGTCCTCATTGCTTTCCTCGAGTGCAGCTATGAGGCTGTGCACGGAAGAGTGCAGGGTCCTGGGACACTCTGACCAGTGCTGGATGCCACCGCTGCACTCACCGTCCTCGGATTATAGGAGCAACATGTTCATCCCAGGGGAAGAATTTCCAGCCCAACCTCAGCAGCAGCACCCCCATCCAAATCTCGACGACGACAACCAGCACGCAGAAACTGGGGACAAGAAGAAGAGTTTTTCCACCTTTGGGAAGGACTCGCCAAACGATGGCACTGGGGACACCAGCACATCCTCCCTGCTCTCAGAAATGAGCAGCGTCTTCCAGCGCCTTTTACCCCCTTCTATGGACACATATCCTGAGTGCAGCGAGGTGGATCGGTCCAACTCCCTGGAGCGCCGGAAGGGACCAGTGCCAGCGAAAACTGCGGGGTACCCACAAGGGGTGGCAGCCTGGGCAGCCAGCACACACTTTCAGAATCCCACCACCACCTCTGCGTCTCCACTCGGAACTCACTCCAGTGTGCAGCCTTCTTCAAAGTGGCTGCCAGCCATGGAGGAGATCCCAGAAAATTATGAAGAGGATGATTTTGACAATGTGCTCAACCACCTTAATGATGGGAAGCATGAACTCATGGACGCCAGCGAGCTAGTGGCTGAGATTAACAAACTGCTTCAGGATGTTCGCCAGAGCTAG

Related Sequences

XP_004855028.1 Protein

Pcdh18 PREDICTED: protocadherin-18-like isoform X1 [Heterocephalus glaber]

Length: 1151 aa      
>XP_004855028.1
MHQMNTKMHFRFLFALLIASFNHDVLGKNLKYRIYEEQRVGSVIARLSEDVADVLLKLPNPSAVRFRAMQRGNSLLVVNENTGEISIGATIDREQLCQKNLNCSIEFDVITLPTEHLQLFHIEVEVLDINDNSPQFSRSLIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSANDFFNIEVRTRTDGAKYAELIVVSELDRELQSSYELQLTASDMGVPQRSGSSLLKISISDSNDNSPAFEQQSYIIQLLENSPVGTLLLDLNATDPDEGANGKIVYSFSSHVSPKIIETFKIDSERGHLTLFKQVDYEITKSYEIDVQAQDLGPNSIPAHCKIIINVVDVNDNKPEININLMSPGKEEISYIFEGDPIDTFVALVRVQDKDSGLNGEIVCKLHGHGHFKLQQTYENNYLILTNATLDRERRSEYSLTVIAEDKGTPSLSSVKHFTVQINDINDNPPRFQRSQYEFVISENNSPGAYITTVTATDLDLGENGQVTYTILETFVLESSVTTYVTIDPSNGAIYALRIFDYEEVSQITFVVEARDGGSPKQLVSNTTVVLTIIDENDNVPVVIRPVLHNNTAEISIPKEAESGFHVTRIRAIDRDSGVNAELSCSIVAGNEESIFLIDPRSCDIHTNVSMDSVPYTEWELSVIIQDKGNPQLHTKVLLKCMIFEYAESVTSTAMTLVSQGSLDVSMIIIISLGAICAVLLVIMVLFATRYNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHRSSPSSSPTLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVEQVSQLLSMLHQGQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGEGFSDLFLTDGRIPAVLSPAEYNNESSLLSSSAAMRLCTEECRVLGHSDQCWMPPLHSPSSDYRSNMFIPGEEFPAQPQQQHPHPNLDDDNQHAETGDKKKSFSTFGKDSPNDGTGDTSTSSLLSEMSSVFQRLLPPSMDTYPECSEVDRSNSLERRKGPVPAKTAGYPQGVAAWAASTHFQNPTTTSASPLGTHSSVQPSSKWLPAMEEIPENYEEDDFDNVLNHLNDGKHELMDASELVAEINKLLQDVRQS