Details from NCBI annotation

Gene Symbol Pcdh10
Gene Name protocadherin 10, transcript variant X3
Entrez Gene ID 101705691

Database interlinks

Part of NW_004624777.1 (Scaffold)

For more information consult the page for NW_004624777.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PCDHGC3 ENSCPOG00000009225 (Guinea pig)

Gene Details

protocadherin gamma subfamily C, 3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008284, Guinea pig)

Protein Percentage 39.41%
CDS Percentage 50.78%
Ka/Ks Ratio 0.02742 (Ka = 0.5657, Ks = 20.6277)

PCDHGC3 ENSG00000240184 (Human)

Gene Details

protocadherin gamma subfamily C, 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000312070, Human)

Protein Percentage 39.31%
CDS Percentage 50.81%
Ka/Ks Ratio 0.03637 (Ka = 0.5616, Ks = 15.4405)

Genome Location

Sequence Coding sequence

Length: 3123 bp    Location: 13693984..13732410   Strand: +
>XM_004854969.1
ATGATTGTGCTATTCTTCTTTGCCTTGCTCTGGATGGTGGAAGGAGTCTTTTCCCAGCTTCACTACACGGTGCAGGAGGAGCAGGACCATGGCACTTTCGTGGGGAATATCGCTGAAGATCTGGGCTTGGACATTACAAAACTTTCAGCTCGCAGATTTCAGACGGTGCCCAACTCACGGACCCCTTACTTGGACCTCAACCTGGAAACCGGGGTGCTGTACGTGAACGAGAAGATCGACCGCGAGCAAATCTGCAAGCAGAGCCCTTCCTGCGTCCTGCACCTAGAGGTCTTCCTGGAGAATCCCCTGGAACTGTTCCGGGTGGAGATTGAGGTGCTGGACATAAATGACAACCCCCCTTCTTTCCCGGAGCCGGACCTGACGGTGGAAATCTCGGAGAGCGCCACGCCGGGTACCCGCTTCCCTTTAGAGAGCGCCTTCGACCCAGACGTGGGCACCAACTCCTTGCGCGACTACGAGATCACCCCCAACAGCTACTTCTCCCTGGACGTGCAGACCCAGGGGGATGGCAACCGATTCGCCGAGCTGGTGCTAGAGAAGCCACTGGACCGAGAGCAGCAAGCGGTGCACCGCTACGTGCTGACCGCGGTGGACGGGGGAGGAGGGGGAAGCGCAGGCGAAGGAGGGGGAGGCGGCGGGGGAGCGGGCCTGTCCCCCCAGCAGCAGCGCACGGGCACGGCCCTGCTCACTATCCGAGTTCTGGACTCCAACGACAACGTGCCGGCTTTCGACCAACCCGTCTACACTGTGTCCCTACCGGAGAACTCGCCCCCGGGCACGTTAGTGATCCAGCTCAACGCCACGGACCCGGACGAGGGCCAGAACGGAGAGGTCGTGTACTCGTTCAGCAGCCACATTTCGCCCCGGGCGCGGGAGCTCTTTGGACTCTCGCCGCGCACCGGCCGGCTGGAGGTGAGCGGTGAGCTGGACTATGAAGAGAGCCCGGTGTACCAGGTGTACGTGCAAGCCAAGGACCTGGGCCCCAACGCTGTGCCTGCGCACTGCAAGGTGCTGGTGCGAGTGCTGGATGCCAACGACAACGCGCCGGAGATCAGCTTCAGCACCGTGAAGGAGGCGGTGAGCGAGGGCGCGGCGCCCGGCACCGTGGTGGCTCTGTTCAGCGTGACCGACCGCGACTCGGAGGAGAACGGGCAGGTGCAGTGCGAGCTGCTGGGGGACGTGCCCTTCCGCCTCAAGTCTTCCTTCAAGAATTACTATACCATCGTGACGGAGGCCCCCCTGGACCGAGAGGCCGGGGACTCCTACACCCTCACCGTGGTGGCCCGGGACCGGGGCGAGCCGGCGCTCTCCACCAGTAAGTCGATCCAGGTGCAAGTGTCAGATGTGAACGACAACGCGCCGCGCTTCAGCCAGCCGGTCTACGACGTGTATGTGACCGAAAACAACGTGCCAGGCGCCTACATCTACGCGGTGAGCGCCACCGATCGCGACGAGGGGGCCAACGCCAAGATAGAATACTCTATCCTCGAGTGCCAGATCCAGGGCATGAGCGTTTTCACCTACGTGTCCATCAACTCTGAGAATGGCTACTTGTACGCCCTGCGGTCCTTTGACTACGAGCAGCTTAAGGACTTCAGCTTTCAGGTGGAAGCCCGGGACGCCGGCAGCCCCCAGGCGCTGGCGGGCAATGCCACCGTCAACATCCTCATAGTGGATCAGAACGACAACGCCCCTGCCATCGTGGCGCCCTTACCCGGGCGCAATGGGACTCCGGCCCGCGAGGTGCTGCCCCGCTCGGCGGAGCCCGGTTACCTGCTCACCCGCGTGGCCGCGGTGGACGCGGACGACGGCGAGAACGCCCGGCTCACCTACAGCATCGTGAGGGGCAACGAAATGAACCTCTTCCGCATGGACTGGCGCACCGGCGAGCTCCGCACGGCTCGCCGGGTTCCAGCCAAGCGCGACCCCCAGCGGCCTTACGAGCTGGTGATCGAGGTGCGCGACCACGGGCAGCCGCCCCTGTCCTCCACGGCCACTCTGGTGGTTCAACTGGTGGATGGCGCCGTGGAGCCCCAGGGCGGGGGCGGGAGCGGAGGCGGAGGCTCAGGGGAACACCAGCGCCCCAGCCGCTCCGGCAGCGGGGAGAGCTCGCTGGACCTCACCCTCATCCTCATCATAGCGCTGGGCTCCGTGTCCTTCATCTTCCTGTTGGCCATGATCGTGCTGGCTGTGCGCTGCCAAAAAGAGAAAAAGCTCAACATCTACACGTGTCTCGCCAGCGACTGCTGCCTCTGCTGTTGCTGCTGTGGCAGCGGGGCGTCGACCTGCTGCGGCCGCCAAGCCCGGGCGCGCAAGAAAAAACTCAGCAAGTCGGACATCATGCTGGTGCAGAGCTCCAACGTCCCGAGCAACCCGGCCCAGGTGCCGGTGGAGGAGTCCGGGAGCTTCGGCTCGCACCATCACAACCAGAATTACTGCTACCAGGTCTGCCTGACCCCAGAGTCCGCAAAGACCGATCTGATGTTCCTTAAGCCCTGCAGCCCTTCGAGGAGTACGGACACTGAGCACAATCCCTGCGGGGCCATCGTCACCGGCTACACCGACCAGCAGCCCGACATCATCTCCAACGGAAGCATTTTGTCCAACGAGACTAAACACCAGCGAGCAGAGCTCAGCTATCTAGTTGACAGACCTCGTCGAGTTAACAGTTCTGCATTCCAGGAAGCGGACATAGTAAGCTCTAAGGATAGTGGTCACGGGGACAGTGAACAGGGAGACAGTGACCATGATGCCACCAACCGCGGCCAGTCAGCTGGTATGGATCTGTTCTCCAACTGCACTGAGGAATGTAAAGCACTGGGCCACTCAGATCGGTGCTGGATGCCTTCTTTTGTCCCTTCGGATGGACGCCAGGCTGCTGATTACCGCAGCAATCTGCACGTTCCCGGCATGGACTCTGTTCCCGACACCGAGGTGTTTGAAACTCCAGAAGCCCAGCCTGGGGCAGAGCGGTCTTTCTCCACCTTCGGCAAAGAGAAGACCCTGCACAGCACTCTGGAGAGGAAGGAGCTGGACGGACTGCTGTCTACTACACGAGCGCCTTACAAACCACCATATTTGACACGGAAAAGGATATGCTAG

Related Sequences

XP_004855026.1 Protein

Pcdh10 PREDICTED: protocadherin-10-like isoform X3 [Heterocephalus glaber]

Length: 1040 aa     
>XP_004855026.1
MIVLFFFALLWMVEGVFSQLHYTVQEEQDHGTFVGNIAEDLGLDITKLSARRFQTVPNSRTPYLDLNLETGVLYVNEKIDREQICKQSPSCVLHLEVFLENPLELFRVEIEVLDINDNPPSFPEPDLTVEISESATPGTRFPLESAFDPDVGTNSLRDYEITPNSYFSLDVQTQGDGNRFAELVLEKPLDREQQAVHRYVLTAVDGGGGGSAGEGGGGGGGAGLSPQQQRTGTALLTIRVLDSNDNVPAFDQPVYTVSLPENSPPGTLVIQLNATDPDEGQNGEVVYSFSSHISPRARELFGLSPRTGRLEVSGELDYEESPVYQVYVQAKDLGPNAVPAHCKVLVRVLDANDNAPEISFSTVKEAVSEGAAPGTVVALFSVTDRDSEENGQVQCELLGDVPFRLKSSFKNYYTIVTEAPLDREAGDSYTLTVVARDRGEPALSTSKSIQVQVSDVNDNAPRFSQPVYDVYVTENNVPGAYIYAVSATDRDEGANAKIEYSILECQIQGMSVFTYVSINSENGYLYALRSFDYEQLKDFSFQVEARDAGSPQALAGNATVNILIVDQNDNAPAIVAPLPGRNGTPAREVLPRSAEPGYLLTRVAAVDADDGENARLTYSIVRGNEMNLFRMDWRTGELRTARRVPAKRDPQRPYELVIEVRDHGQPPLSSTATLVVQLVDGAVEPQGGGGSGGGGSGEHQRPSRSGSGESSLDLTLILIIALGSVSFIFLLAMIVLAVRCQKEKKLNIYTCLASDCCLCCCCCGSGASTCCGRQARARKKKLSKSDIMLVQSSNVPSNPAQVPVEESGSFGSHHHNQNYCYQVCLTPESAKTDLMFLKPCSPSRSTDTEHNPCGAIVTGYTDQQPDIISNGSILSNETKHQRAELSYLVDRPRRVNSSAFQEADIVSSKDSGHGDSEQGDSDHDATNRGQSAGMDLFSNCTEECKALGHSDRCWMPSFVPSDGRQAADYRSNLHVPGMDSVPDTEVFETPEAQPGAERSFSTFGKEKTLHSTLERKELDGLLSTTRAPYKPPYLTRKRIC