Sequence details NCBI ID: XM_004854946.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Spata5
Gene Name spermatogenesis associated 5, transcript variant X2
Entrez Gene ID 101723993

Database interlinks

Part of NW_004624777.1 (Scaffold)

For more information consult the page for NW_004624777.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SPATA5 ENSCPOG00000005397 (Guinea pig)

Gene Details

spermatogenesis associated 5

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004857, Guinea pig)

Protein Percentage 90.84%
CDS Percentage 92.48%
Ka/Ks Ratio 0.2623 (Ka = 0.0484, Ks = 0.1845)

SPATA5 ENSG00000145375 (Human)

Gene Details

spermatogenesis associated 5

External Links

Gene Match (Ensembl Protein ID: ENSP00000274008, Human)

Protein Percentage 88.57%
CDS Percentage 89.86%
Ka/Ks Ratio 0.21154 (Ka = 0.0593, Ks = 0.2805)

Spata5 ENSMUSG00000027722 (Mouse)

Gene Details

spermatogenesis associated 5

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000103747, Mouse)

Protein Percentage 87.57%
CDS Percentage 86.52%
Ka/Ks Ratio 0.16275 (Ka = 0.0717, Ks = 0.4407)

Spata5 ENSRNOG00000017462 (Rat)

Gene Details

spermatogenesis associated 5 (Spata5), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000023584, Rat)

Protein Percentage 87.47%
CDS Percentage 86.47%
Ka/Ks Ratio 0.16148 (Ka = 0.0725, Ks = 0.4488)

Genome Location

Sequence Coding sequence

Length: 2658 bp    Location: 3342482..3639117   Strand: +
Raw sequence   
>XM_004854946.1
ATGTCTTCCAAGAAGAATCGAAAGCGGCTGAACCTAAGCATGGAAAATGGTTCGCCCTTGTCCTCTGCGGCTTCCTCTCGTGCGGGGGCCCCAGACTCGGCGGCAGCTGGGACTCTGGTGGTGACCAACTTCCTAGAAAAGGACGCCAAAGTTCCTAAAACATTCCAGAATTCCCTTGTTCATCTTGGACTCAACACTATGAAGTCTGCAAATATATGTATAGGTCGACCAGTGCTGCTTACCAGCTTGAACGGAAAGCAAGAGGTTTATACAGCCTGGCCAGTGGCAGGGTTTCCTGGAGGCAAGGTTGGCCTGAGTGAGATGGCACAGAAGAATGTTGGTGTGAGGGCTGGTGATGCCATCCAGGTGCAGCCTCTTGTGGGTGCTGTGCTACAGGCTCAGAAAATGGACTTGGCACTGAGTGACAAAGATCGGGAAATTAATGAAGAAGAACTGACTTCTTGTATTCTGAGAAAACTAGATGGCAAGATTGTTTTACCAGGCAACTTTCTGTATTGTACCTTCTATGGACGACTATGCAAATTACAAGTGTTGCAAGTGAAAGGAGCAGATGGCATGATACTGGGAAGGCCTCAGAGTGACTCTAATACTGCTCAGGGAATGGCCTCTGAACAGTCCAGCACAGAAACCAGTAGCTTGGATATATCCTTCCAGCTAAGCCATTTAGATCTGGAAGAGCCCCAGAGTCCAGCATCAAGAAGTACTCCTTGTAAACCTGTTGATGACAGAATTACGAATAAAGCCAGTGACATTTTGTTGGATGTTACACAGAGCCCTGTGGCTGGCAGTGGACTTCAGCTAGAGAAAGTCACAGCTCTTACATGTAATCTTGAGTCTGCCAGAGAAGGAAATAAGCAACTAATTGTTGATGAGAGATTGCTAAAATCTGCCAAAACAGGAGCAAAGTGTAATACTGACACTTTTTATTTTATTTCTTCAACAACAAGAATCAATCTTAGAAAGATTCATATAAATTCAAAAGGACAAGAAAACCAATTCAAAGTAACTTATGATATGATAGGAGGCTTAAACAGTCAGTTGAAAGCAATTAGAGAAATGATAGAATTGCCTCTCAAACAACCTGAACTTTTCAAGAGTTATGGAATTCCAGCTCCTAGAGGAGTGTTACTCTATGGCCCTCCGGGTACTGGAAAGACAATGATTGCCAAGGCCATTGCCAATGAAGTTGGAGCCTATGTTTCTGTAATTAATGGTCCTGAAATTATAAGCAAATTCTATGGTGAGACTGAAGCAAAGCTACGTCAGATATTTGCTGAAGCCACTCTACGGCATCCATCAATTATTTTTATTGATGAGCTGGATGCTCTTTGCCCTAAAAGAGAAGGAGCTCAGAATGAAGTGGAAAAAAGAGTTGTAGCTTCCCTCTTAACACTGATGGATGGCTTTGGCTCAGAAGCAAGTGAAGGACGGGTGTTAGTCCTTGGGGCCACAAATCGCCCACAAGCATTAGATGCTGCTCTCCGAAGACCTGGACGATTTGATAAAGAGATTGAGATTGGAGTTCCCAATGCTCAGGACCGGCTAGATATTCTCCAGAAACTTCTTCAAAGAGTACCCCATTCGCTCACTAAAACTGAACTGCTACAGCTGGCAAATAGTGCTCATGGATATGTTGGAGCAGACTTGAAAGCTTTGTGTAATGAAGCAGGTCTCTGTGCCTTGCGAAGAGTCCTGAGGAAACAGCCTAACCTCCCTGATGGCAAAGTGGCTGGATTGGTGAAGATTACTCTGAATGATTTCTTGCAGGGAATGAATGGCATCAGGCCCAGTGCCATGAGAGAAGTAGCAATTGATGTCCCAAATGTGTCCTGGTCAGATATAGGAGGACTAGAGAATATCAAACTGAAATTGAAACAGGCTGTGGAATGGCCCTTGAAACATCCAGAGTCTTTCATCCGAATGGGTATTCAGCCACCTAAAGGAGTTCTTCTATATGGGCCACCTGGATGCTCTAAAACAATGATAGCAAAGGCCTTGGCCAATGAGAGTGGACTGAATTTTCTATCTATAAAGGGGCCTGAATTAATGAATAAATATGTTGGTGAATCTGAAAGAGCAGTCAGAGAGATCTTCCGAAAAGCAAGAGCAGTGGCTCCTTCCATTATTTTCTTTGATGAACTTGATGCCTTGGCAGTTGAAAGAGGCAGTTCTCCAGGTGCTGGGAATGTGGCAGACCGTGTTTTGGCTCAGCTCTTAACGGAAATGGATGGGATTGAACAGCTAAAGGATGTGACAATTTTGGCAGCTACTAATCGTCCGGATAGGATAGACAAGGCTTTGATGCGGCCTGGAAGAATAGACAGAATCATCTACGTACCGTTACCAGATGCAGCAACAAGAAGAGAAATATTTAACCTGCAGTTTCACTCTATGCCAATCAGTAATGAAGTGGAACTAGACGAACTCATCCTCCAAACCCATACATATTCAGGAGCAGAGATTATTGCCATCTGTAGAGAGGCAGCCCTTCTGGCTCTAGAGGAAAACATTAAAGCCAACTGCATTATGAAGAAGCATTTTACTCAAGCTTTGAGCATAGTGACGCCTAGAATTCCTGAGTCACTGAGACGTTTTTATGAAGATTATCAGGAGAAAAGTGGGCTGCATACTCTCTGA

Related Sequences

XP_004855003.1 Protein

Spata5 PREDICTED: spermatogenesis-associated protein 5 isoform X2 [Heterocephalus glaber]

Length: 885 aa      View alignments
>XP_004855003.1
MSSKKNRKRLNLSMENGSPLSSAASSRAGAPDSAAAGTLVVTNFLEKDAKVPKTFQNSLVHLGLNTMKSANICIGRPVLLTSLNGKQEVYTAWPVAGFPGGKVGLSEMAQKNVGVRAGDAIQVQPLVGAVLQAQKMDLALSDKDREINEEELTSCILRKLDGKIVLPGNFLYCTFYGRLCKLQVLQVKGADGMILGRPQSDSNTAQGMASEQSSTETSSLDISFQLSHLDLEEPQSPASRSTPCKPVDDRITNKASDILLDVTQSPVAGSGLQLEKVTALTCNLESAREGNKQLIVDERLLKSAKTGAKCNTDTFYFISSTTRINLRKIHINSKGQENQFKVTYDMIGGLNSQLKAIREMIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIAKAIANEVGAYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPKREGAQNEVEKRVVASLLTLMDGFGSEASEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGVPNAQDRLDILQKLLQRVPHSLTKTELLQLANSAHGYVGADLKALCNEAGLCALRRVLRKQPNLPDGKVAGLVKITLNDFLQGMNGIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLSIKGPELMNKYVGESERAVREIFRKARAVAPSIIFFDELDALAVERGSSPGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREIFNLQFHSMPISNEVELDELILQTHTYSGAEIIAICREAALLALEENIKANCIMKKHFTQALSIVTPRIPESLRRFYEDYQEKSGLHTL