Details from NCBI annotation

Gene Symbol Bbs12
Gene Name Bardet-Biedl syndrome 12, transcript variant X2
Entrez Gene ID 101721278

Database interlinks

Part of NW_004624777.1 (Scaffold)

For more information consult the page for NW_004624777.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

BBS12 ENSCPOG00000005539 (Guinea pig)

Gene Details

Bardet-Biedl syndrome 12

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000019320, Guinea pig)

Protein Percentage 82.27%
CDS Percentage 88.42%
Ka/Ks Ratio 0.42856 (Ka = 0.0975, Ks = 0.2274)

BBS12 ENSG00000181004 (Human)

Gene Details

Bardet-Biedl syndrome 12

External Links

Gene Match (Ensembl Protein ID: ENSP00000438273, Human)

Protein Percentage 79.92%
CDS Percentage 85.2%
Ka/Ks Ratio 0.36591 (Ka = 0.1224, Ks = 0.3345)

Bbs12 ENSMUSG00000051444 (Mouse)

Gene Details

Bardet-Biedl syndrome 12 (human)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000052179, Mouse)

Protein Percentage 70.11%
CDS Percentage 79.51%
Ka/Ks Ratio 0.38269 (Ka = 0.1842, Ks = 0.4812)

Bbs12 ENSRNOG00000007510 (Rat)

Gene Details

Protein Bbs12

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000009898, Rat)

Protein Percentage 71.45%
CDS Percentage 79.64%
Ka/Ks Ratio 0.37174 (Ka = 0.1799, Ks = 0.4838)

Genome Location

Sequence Coding sequence

Length: 2127 bp    Location: 3168885..3179521   Strand: +
>XM_004854939.1
ATGGTGATGGCTTGCAGGGTCATGAACAAAAGAAGGCACATGGGACTTCAGCAGCTTTCTTCATTTGCAGAAACAGGAAGAACATTCCTAGGCCCAGTAAAATCATCAAAATTTATTACTGATGAAGAATGTCATGAAAGTGTATTAGTCAGCTCAACAGTAAGGCTTCTTGAAAGTTTAGAGATGACCAGTGCCACAGGGCAACTTCTCAATGAAGCAGTTCAAGCACAGAATGACACATATAGAACTGGAGCCACCACTCTTTTGTTTCTTGCTGGTGCATGGAGCAGTGCTGTTGAAGAATGTCTCCACCTGGGTGTCCCCATTGCAATAATTGTTTCAGTAATGTCAGAAGCCTTGAACTCCTGTAGTGAAGAGGTTGTTTCCCTTCAGGTACCTGTCCACAATATATTTGACCATATGGGCAGCACAAAGGCAATTTCTGAACTTGAGACAGTTAGTGTCAGTTTGTGTCCTTTTCTACAAGACCCTTCAGGTGCTAGTTCAGTACAGGAAGAGCATGATCACAGAGATGGTGTACCTCAGTTAACCACTTACAATCTTTCCAGGAGACCTGTTAAATCACCTAAGTTCTTCCAACCTGATGCTAAAATTGAAGCAGGTGAAAACACATCACAAACTCTGAAGAATAGTCTACATACAGACACCTTCAGAAAATCTATATTTATCCATAGTAGGCATTTTAACAGGACAGATAATAATCAAGGAATACACAAGCCAGATAGATTTCAGGAACAGCGTGGTGCCACTACTTTCCAAACTTACAGATGTGATGATCTGGCTGAGTTGGCAGTGGGCTTGAGTCATGGTGATCATAGCAGCATGAAACTGGTAGAAGAAGCAGTACGGCTGCAGTATCAGAATGCTTGTATGCAACAAGGCAACTGTGGAGTGCCATTTGTGTTTGACATTTCAAGACTCTTCACTTGCACTCTACCAGGCTTACCTGAAACCTTTTCTTGTGTTTGTCCAGGATATATCATGCTGGTGTCAATATCCTGTGCTGCTCTGATTAAGGAATTGCAGAATCAGCCTATTCGGGTAGTTCTTATTGAGGGTGACCTCACAGAGAGCTATCGCCACCTGGGATTTAATAAGTCTACAAATATTAAAACAGTGCTAGATAGCGTGAAGCTTCAAGAAGACAGCTCCGAAGAACTGTGGGCAAATCATGTACTACAACTGTTAATCCAGTTCAATGTGAATCTCATCCTGGTAAAAGGAAATGTATCTGAACACTTGACTGAAAAATGCATGCACAGTAAGCGGCTGGTTGTTGGGTCAGTGAATGGCCATGTGATACAGGCTTTCGCAGAGGCCACAGGAGCAGTGCAGGTGGCCTATATCACACAAGTGAATGAAGACTGTGTGGGCAATGGGATCTCTGTGGCCTTCTGGAGAAAACCCTTGGATGTTGTAGATAGGAACAATAGAATCCCAGTCTTATTAAAAACAGAAAGAATTAATTTGATTACAGCAGTGCTCGCTAGCCCAGTTAGTGCACAGATGCAAACCAAAGAAGATAGGTTCTGGACATGTGCATATCGTATATATCATGCTCTAAAAGAGGAAAAGGTCTTCCTTGGAGGCAGTGCAGTTGAATTTTTGTGTCTTAGCCATCTTCAAATTCTTGCTGAGCAGCCTCTCCAAAAAGGAGACCGTGCCTGTTTGGGATGGCTTCGTGATACTTCCTCTTGGCTAGCTTCATCTCTGGCAATATACAGACCAACTGTGCTTAAGTGCCTGGCAAATGGATGGTACAAATACCTCTCAGTTCTCCTATATAACACTGCCAGTTACTCATCAGAATTGGAAGCCAGCACATTCATTCAGCATCATCTACAAAATGCTATAGGCTCTGGCTCTCCTTCATCTTATATCTTGAAAGAATATAGTAAACTAGCTAGTGGAATTTTTAATTCAAGCATTTCAAACAAACTGGAGCAGTTTCCAAGAGTTTATGATGTTGTTACACCAAAGATTGAGGCATGGCGCCGAGCACTGGACTTAGTACTCTTAGTGCTGCAAACAGACAGTGAAATTATTACTGGACTTGGACATGTACAGATAAATTCACAGAAATTAGAGGGTTTTTTATTTTTGTAA

Related Sequences

XP_004854996.1 Protein

Bbs12 PREDICTED: Bardet-Biedl syndrome 12 protein isoform X2 [Heterocephalus glaber]

Length: 708 aa      View alignments
>XP_004854996.1
MVMACRVMNKRRHMGLQQLSSFAETGRTFLGPVKSSKFITDEECHESVLVSSTVRLLESLEMTSATGQLLNEAVQAQNDTYRTGATTLLFLAGAWSSAVEECLHLGVPIAIIVSVMSEALNSCSEEVVSLQVPVHNIFDHMGSTKAISELETVSVSLCPFLQDPSGASSVQEEHDHRDGVPQLTTYNLSRRPVKSPKFFQPDAKIEAGENTSQTLKNSLHTDTFRKSIFIHSRHFNRTDNNQGIHKPDRFQEQRGATTFQTYRCDDLAELAVGLSHGDHSSMKLVEEAVRLQYQNACMQQGNCGVPFVFDISRLFTCTLPGLPETFSCVCPGYIMLVSISCAALIKELQNQPIRVVLIEGDLTESYRHLGFNKSTNIKTVLDSVKLQEDSSEELWANHVLQLLIQFNVNLILVKGNVSEHLTEKCMHSKRLVVGSVNGHVIQAFAEATGAVQVAYITQVNEDCVGNGISVAFWRKPLDVVDRNNRIPVLLKTERINLITAVLASPVSAQMQTKEDRFWTCAYRIYHALKEEKVFLGGSAVEFLCLSHLQILAEQPLQKGDRACLGWLRDTSSWLASSLAIYRPTVLKCLANGWYKYLSVLLYNTASYSSELEASTFIQHHLQNAIGSGSPSSYILKEYSKLASGIFNSSISNKLEQFPRVYDVVTPKIEAWRRALDLVLLVLQTDSEIITGLGHVQINSQKLEGFLFL