Details from NCBI annotation

Gene Symbol Ndnf
Gene Name neuron-derived neurotrophic factor, transcript variant X2
Entrez Gene ID 101714766

Database interlinks

Part of NW_004624777.1 (Scaffold)

For more information consult the page for NW_004624777.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

NDNF ENSCPOG00000009703 (Guinea pig)

Gene Details

neuron-derived neurotrophic factor

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008709, Guinea pig)

Protein Percentage 97.18%
CDS Percentage 92.49%
Ka/Ks Ratio 0.05039 (Ka = 0.0143, Ks = 0.284)

NDNF ENSG00000173376 (Human)

Gene Details

neuron-derived neurotrophic factor

External Links

Gene Match (Ensembl Protein ID: ENSP00000369014, Human)

Protein Percentage 95.25%
CDS Percentage 90.43%
Ka/Ks Ratio 0.05798 (Ka = 0.023, Ks = 0.397)

Ndnf ENSMUSG00000049001 (Mouse)

Gene Details

neuron-derived neurotrophic factor

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000051297, Mouse)

Protein Percentage 88.03%
CDS Percentage 85.15%
Ka/Ks Ratio 0.10786 (Ka = 0.0621, Ks = 0.5762)

RGD1311080 ENSRNOG00000006857 (Rat)

Gene Details

Protein RGD1311080

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000009094, Rat)

Protein Percentage 85.92%
CDS Percentage 84.1%
Ka/Ks Ratio 0.12673 (Ka = 0.0762, Ks = 0.6014)

Genome Location

Sequence Coding sequence

Length: 1707 bp    Location: 1072349..1036611   Strand: -
>XM_004854923.1
ATGGTGCTGCCCCACTGGTGTCTGCTATGGCTGCTGTTACCTCTCGCCTCAAGGACCCAAAAGCTGCCCACTCGTGATGAGGAGCTTTTCCAGATGCAGATCCGAGACAAGGCATTTTTTCATGACTCCTCAGTCATTCCAGATGGCGCTGAAATTAGCAGTTATCTCTTCAGAGATACACCAAAAAGGTATTTCTTTGTGGTTGAAGAAGACAATACCCCATTGTCAGTCACAGTGACTCCCTGTGATGCGCCTTTGGAGTGGAAGCTGAGTCTCCAGGAGCTGCCTGAGGAGACCAGTGGGGAAGGCTCAGGTGACCCTGAACCTCTTGAGCAGCAGAAGCAACAGATCATTAATGAGGAAGGCACAGAGCTGTTCTCCTACAAAGGCAATGATGTGGAGTATTTCATCTCTTCTAGCTCTCCATCTGGCTTATATCAACTAGAACTTCTTTCAACAGAGAAAGACACACATTTCAAAGTGTATGCTACCACCACTCCAGAGTCAGATCAGCTATACCCTGAATTACCATATGACCCCAGAGTAGATGTGACTTCCCTGGGACGCACCACAGTCACTTTGGCCTGGAAACCGAGCCCCACAGCCTCTTTGCTGAAACAACCCATCCAGTACTGTGTGGTCATCAACAGAGAACACAATTTTAAAAGTCTCTGTGCAGTGGATGCAAAGCTGAGTGCCGATGATGCTTTCATGATGGCCCCAAAACCTGGACTAGATTTCAGCCCCTTTGACTTTGCCCATTTTGGATTTCCTTCAGATAATCTGGGTAAAGAGCGCAGCTACCTGGCAAAGCCTTCTCCAAAATTGGGGCGCCATGTCTACTCGAGGCCCAAGGTTGACATTCAGCAGATCTGCATAGGAAACAAGAACATCTTCACCGTTTCTGATCTGAAACCTGACACACAGTACTACTTTGACATCTTCGTGGTCAACACCAACAGCAACACGAGCACTGCTTATGTGGGTACCTTTGCCAGGACCAAGGAAGAAGCAAAACAGATGACTGTGGAGCTCAAAGATGGGAAAGTGACAGATGTATTTGTTAAAAGGAAGGGAGCAAAGTTTCTACGGTTTGCTCCAGTGTCTTCTCACCAAAAAGTAACCATCTTTATTCACTCTTGCCTGGATGCCATCCAAATCCAAGTGAGAAGAGATGGGAAACTTCTTCTGTCTCAGAATGTGGAAGGCATTCGGCAGTTTCAGCTGAGAGGAAAACCTAAAGCAAAGTATCTCATTCGACTGAAAGGAAACAAGAAAGGAGCATCCATGTTGAAAATTCTAGCCACCACCAGGCCTAGTAAGCAGTCATTTCCCTCTCTTCCTGAAGATACGAGAATCAAAGCCTTTGATAAGCTCCGTACTTGTTCTTCAGCCACGGTGGCCTGGTTGGGCACCCAGGAGAGGAACAAGTTCTGCATCTACAAAAAAGAAGTAGATGATAACTACAATGAAGACCAGAAGAAAAGAGAACAAAACCAATGCCTAGGACCAGATATGAGGAAGAAATCTGAAAAGGTCCTCTGTAAATATTTTCACAGCCAGAACCTGCAGAAAGCAGTGACTACAGAAACCATTAAAGATCTTCAGCCCGGAAAATCTTACCTGCTGGATGTTTATGTCATAGGACATGGGGGACACTCAGTGAAGTATCAGAGTAAAATTGTGAAAACCAGGAAATTCTGTTAG

Related Sequences

XP_004854980.1 Protein

Ndnf PREDICTED: protein NDNF isoform X2 [Heterocephalus glaber]

Length: 568 aa      View alignments
>XP_004854980.1
MVLPHWCLLWLLLPLASRTQKLPTRDEELFQMQIRDKAFFHDSSVIPDGAEISSYLFRDTPKRYFFVVEEDNTPLSVTVTPCDAPLEWKLSLQELPEETSGEGSGDPEPLEQQKQQIINEEGTELFSYKGNDVEYFISSSSPSGLYQLELLSTEKDTHFKVYATTTPESDQLYPELPYDPRVDVTSLGRTTVTLAWKPSPTASLLKQPIQYCVVINREHNFKSLCAVDAKLSADDAFMMAPKPGLDFSPFDFAHFGFPSDNLGKERSYLAKPSPKLGRHVYSRPKVDIQQICIGNKNIFTVSDLKPDTQYYFDIFVVNTNSNTSTAYVGTFARTKEEAKQMTVELKDGKVTDVFVKRKGAKFLRFAPVSSHQKVTIFIHSCLDAIQIQVRRDGKLLLSQNVEGIRQFQLRGKPKAKYLIRLKGNKKGASMLKILATTRPSKQSFPSLPEDTRIKAFDKLRTCSSATVAWLGTQERNKFCIYKKEVDDNYNEDQKKREQNQCLGPDMRKKSEKVLCKYFHSQNLQKAVTTETIKDLQPGKSYLLDVYVIGHGGHSVKYQSKIVKTRKFC