Details from NCBI annotation

Gene Symbol Spg20
Gene Name spastic paraplegia 20 (Troyer syndrome)
Entrez Gene ID 101721028

Database interlinks

Part of NW_004624776.1 (Scaffold)

For more information consult the page for NW_004624776.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SPG20 ENSCPOG00000000296 (Guinea pig)

Gene Details

spastic paraplegia 20 (Troyer syndrome)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000258, Guinea pig)

Protein Percentage 91.0%
CDS Percentage 93.09%
Ka/Ks Ratio 0.24889 (Ka = 0.0442, Ks = 0.1777)

SPG20 ENSG00000133104 (Human)

Gene Details

spastic paraplegia 20 (Troyer syndrome)

External Links

Gene Match (Ensembl Protein ID: ENSP00000414147, Human)

Protein Percentage 86.98%
CDS Percentage 89.12%
Ka/Ks Ratio 0.23334 (Ka = 0.0709, Ks = 0.3039)

Spg20 ENSMUSG00000036580 (Mouse)

Gene Details

spastic paraplegia 20, spartin (Troyer syndrome) homolog (human)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000113621, Mouse)

Protein Percentage 81.89%
CDS Percentage 80.72%
Ka/Ks Ratio 0.13488 (Ka = 0.1051, Ks = 0.7794)

Spg20 ENSRNOG00000014155 (Rat)

Gene Details

spastic paraplegia 20 (Troyer syndrome) (Spg20), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000054787, Rat)

Protein Percentage 84.28%
CDS Percentage 81.05%
Ka/Ks Ratio 0.10771 (Ka = 0.0897, Ks = 0.8327)

Genome Location

Sequence Coding sequence

Length: 1881 bp    Location: 1065409..1104938   Strand: +
>XM_004854905.1
ATGGAGCAAGAGTCACAAAATGGAGAACCTGCTGAAATTAAGATTATCAGGGAAGCATACAAGAATGCTTTTTTATTTGTTGATAAAGGTTTGAATACAGATGAATTAGGTCAGAAGGAAGAAGCAAAGAACTACTATAAGCAAGGAATAGGACACCTGCTCAGGGGAATCAGCATTATATCAACAGACCCGCAACACACAGGCCCTGGATGGGAATCTGCTAGACAGATGCAACGGAAAATGAAAGAAACACTACAGAATGTTCGCACCAGGTTAGAAATTCTAGAGAAAGGTCTTGCCACTTCCCTACGGAATGATCTTCAGGAGATACCCAAGTTATATCCAGAATTTCCACCTAAAGAGATGTGTGAAAAGTCGCCAGGGCCTCAGTCCTCTAATTCACCTCCTCAGCATGCTGAACTAAATGGAAACACTGCAACTACAAGTTCAGGACCTATTGCTGCATCTTCTTCTCTAGCCTTACCATCTCCAAGCTGCCCATCAGAAGCTCCTCCTGCTTACACTCCTCAGGCTGTGGAGGGTCACTACACTGTGTCTTATGGAACAGATTCTGGTGAAATGTCATCATTTGTAGAAGATTTCTATAGGACTCATTCTCAGCCACCTCCTCTTGAAACCTTAGGGATGGATGCAGATGAATTGATTTTGATACCAAATGGAGTACAGATTTTTTTTGTAAATCCTGCTGGGGAGGTCAGTGCACCTTCGTATCCTGGGTACCTTCGAATTGTGAGGTTCTTGGATAATTCTCTTGATACAGTTCTAAACCGGCCTCCTGGGTTTCTTCAGGTTTGTGACTGGTTGTATCCTCTGGTTCCTGATAGATCTCCAGTTCTCAAATGTTCTGTGGGAGCCTACATGTTTCCTGATACAATGTTACAAGCGGCAGGATGCTTTGTGGGTGTGGTCTTATCCTCTGAGCTACCAGAAGATGATAGAGAACTCTTTGAGGATTTGTTAAGACAAATGTCTGACCTTCGACTCCAGGCCAACTGGAACAGAGCAGAAGGAGAAAATGAATTTCAAATCCCTGGAAGAACAAGATACCCCTCTGACCAAGTGAAAGAAGCCTCTGGTAGTGATGTGAGTCAGTTAGACCCTTCATTAGGCCAAGGCAACAAGGATGTGCATCATAAAAGAAAATATAAGAAAAAGAAAGGTGCTTCCTGGGTGAGTTGGGGTTTAGTCAAAGGTGCTGAATTTACTGGCAAAGCAATCCAAAAAGGTGCTTCTAAACTCCGAGAACGGATTCAGCCAGAAGAAAAACCAGTGGAAATTAGTCCAGCTGTCAGCAAGGGACTTTATATGGCCAAGCAGGCTACAGGAGGAGCAGCCAAAGTCAGCCAGTTCCTGGTTGATGGAGTTTGCACTGTATCGAATTATGTTGGAAAAGAATTAGCTCCACACGTTAAGAAGCATGGAAGCAAGTTTGTTCCAGAATCTCTTAAAAGAGACGAAGACGGAAAGTCTACCCTGGATGGTGCTATGGTTGTTGCAGCAAGCAGTGTTCAAGGATTTTCAACTGTCTGGCAGGGATTGGAATGTGCAGCTAAATGCATTGTTGACAATGTTTCAGCGGAAATTGTACAAACTGTCAGATACAGATACGGGCATAATGCAGGAGAAGCTACACACCATGCAGTGGATTCTGCCATCAATGTTGGTGTAACTGCCTATAATATTGACAACATTGGTATCAAAGCAGTGGTGAAGAAAACTGCAAAACAAACAGGACAAAAACTCCTTGAGGACTATCAAATAACTGATAATTCTCAGAAGGAAGGTGAAGAAGGAACATCAAATACAAAAATGAGAAGACAGAAGGATGAGAAGAAAGAAGCAAAGAAGAAAGATAAATGA

Related Sequences

XP_004854962.1 Protein

Spg20 PREDICTED: spartin [Heterocephalus glaber]

Length: 626 aa      View alignments
>XP_004854962.1
MEQESQNGEPAEIKIIREAYKNAFLFVDKGLNTDELGQKEEAKNYYKQGIGHLLRGISIISTDPQHTGPGWESARQMQRKMKETLQNVRTRLEILEKGLATSLRNDLQEIPKLYPEFPPKEMCEKSPGPQSSNSPPQHAELNGNTATTSSGPIAASSSLALPSPSCPSEAPPAYTPQAVEGHYTVSYGTDSGEMSSFVEDFYRTHSQPPPLETLGMDADELILIPNGVQIFFVNPAGEVSAPSYPGYLRIVRFLDNSLDTVLNRPPGFLQVCDWLYPLVPDRSPVLKCSVGAYMFPDTMLQAAGCFVGVVLSSELPEDDRELFEDLLRQMSDLRLQANWNRAEGENEFQIPGRTRYPSDQVKEASGSDVSQLDPSLGQGNKDVHHKRKYKKKKGASWVSWGLVKGAEFTGKAIQKGASKLRERIQPEEKPVEISPAVSKGLYMAKQATGGAAKVSQFLVDGVCTVSNYVGKELAPHVKKHGSKFVPESLKRDEDGKSTLDGAMVVAASSVQGFSTVWQGLECAAKCIVDNVSAEIVQTVRYRYGHNAGEATHHAVDSAINVGVTAYNIDNIGIKAVVKKTAKQTGQKLLEDYQITDNSQKEGEEGTSNTKMRRQKDEKKEAKKKDK