Sequence details NCBI ID: XM_004854882.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Gjb6
Gene Name gap junction protein, beta 6, 30kDa, transcript variant X5
Entrez Gene ID 101709299

Database interlinks

Part of NW_004624776.1 (Scaffold)

For more information consult the page for NW_004624776.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

GJB6 ENSCPOG00000014795 (Guinea pig)

Gene Details

gap junction protein, beta 6, 30kDa

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000019563, Guinea pig)

Protein Percentage 93.49%
CDS Percentage 89.27%
Ka/Ks Ratio 0.06878 (Ka = 0.0322, Ks = 0.4679)

GJB6 ENSG00000121742 (Human)

Gene Details

gap junction protein, beta 6, 30kDa

External Links

Gene Match (Ensembl Protein ID: ENSP00000348521, Human)

Protein Percentage 94.25%
CDS Percentage 88.12%
Ka/Ks Ratio 0.04874 (Ka = 0.0285, Ks = 0.584)

Gjb6 ENSMUSG00000040055 (Mouse)

Gene Details

gap junction protein, beta 6

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000035630, Mouse)

Protein Percentage 95.4%
CDS Percentage 87.1%
Ka/Ks Ratio 0.0272 (Ka = 0.0209, Ks = 0.7687)

Gjb6 ENSRNOG00000022116 (Rat)

Gene Details

gap junction protein, beta 6 (Gjb6), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000011828, Rat)

Protein Percentage 95.4%
CDS Percentage 87.1%
Ka/Ks Ratio 0.02547 (Ka = 0.0215, Ks = 0.8459)

Genome Location

Sequence Coding sequence

Length: 786 bp    Location: 17478591..17487303   Strand: +
Raw sequence   
>XM_004854882.1
ATGGATTGGGGGACACTGCACACTGTCATTGGGGGTGTGAACAAGCACTCCACCAGCATCGGGAAGGTGTGGATCACGGTCATCTTTATCTTCCGGGTCATGATTCTTGTGGTGGCTGCACACGAAGTGTGGGGTGATGAGCAAGAGGACTTTGTCTGCAACACTCTGCAACCTGGCTGCAAGAACGTATGCTATGACCACTTTTTCCCAGTGTCCCACATTCGGCTGTGGGCCCTGCAGCTCATCTTCGTGTCCACTCCAGCACTGCTGGTGGCCATGCATGTGGCCTACTACAGACATGAAACTGTCCGAAAGTTCAGGCATGGAGAGAGGACGAATGAATTCAAAGACCTGGAAGACATTAAAAGGCAGAAGGTGCGCATCGAGGGATCGCTGTGGTGGACATATACTAGCAGCATCTTCTTCCGAATTATCTTTGAAGCGGGCTTCATGTATGTGTTTTACTTCCTGTACAATGGGTACCACCTGCCCTGGGTCCTGAAATGTGGGATTGACCCCTGCCCCAATCTTGTTGACTGCTTTATTTCCAGGCCAACTGAGAAAACTGTGTTTACCGTTTTTATGATTTCTGCATCTGTGATTTGCATGCTCCTCAATGTGGCTGAGCTATGTTACCTGCTGCTGAAAGTATGCTTCCGGAGATCCAAAAGAACCCAGACTCAAAGAAATCACCCCAACCATGCCCTAAAAGAGAGTACACAAAACGAAATGAATGAGTTGATTTCAGATAGGGGTCAAAATGCCATCACAGGTTTTCCAAGTTAA

Related Sequences

XP_004854939.1 Protein

Gjb6 PREDICTED: gap junction beta-6 protein isoform X5 [Heterocephalus glaber]

Length: 261 aa      View alignments
>XP_004854939.1
MDWGTLHTVIGGVNKHSTSIGKVWITVIFIFRVMILVVAAHEVWGDEQEDFVCNTLQPGCKNVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHETVRKFRHGERTNEFKDLEDIKRQKVRIEGSLWWTYTSSIFFRIIFEAGFMYVFYFLYNGYHLPWVLKCGIDPCPNLVDCFISRPTEKTVFTVFMISASVICMLLNVAELCYLLLKVCFRRSKRTQTQRNHPNHALKESTQNEMNELISDRGQNAITGFPS