Details from NCBI annotation

Gene Symbol Nupl1
Gene Name nucleoporin like 1, transcript variant X1
Entrez Gene ID 101722584

Database interlinks

Part of NW_004624776.1 (Scaffold)

For more information consult the page for NW_004624776.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

NUPL1 ENSCPOG00000012295 (Guinea pig)

Gene Details

nucleoporin like 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011058, Guinea pig)

Protein Percentage 91.12%
CDS Percentage 92.29%
Ka/Ks Ratio 0.31395 (Ka = 0.0538, Ks = 0.1715)

NUPL1 ENSG00000139496 (Human)

Gene Details

nucleoporin like 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000371155, Human)

Protein Percentage 95.48%
CDS Percentage 93.81%
Ka/Ks Ratio 0.11763 (Ka = 0.0232, Ks = 0.1971)

Nupl1 ENSMUSG00000063895 (Mouse)

Gene Details

nucleoporin like 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000038716, Mouse)

Protein Percentage 92.66%
CDS Percentage 90.27%
Ka/Ks Ratio 0.11877 (Ka = 0.0387, Ks = 0.326)

Nupl1 ENSRNOG00000012644 (Rat)

Gene Details

nucleoporin like 1 (Nupl1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000017204, Rat)

Protein Percentage 91.78%
CDS Percentage 89.67%
Ka/Ks Ratio 0.13575 (Ka = 0.0452, Ks = 0.333)

Genome Location

Sequence Coding sequence

Length: 1797 bp    Location: 13220968..13179153   Strand: -
>XM_004854828.1
ATGGCCACGGGGTTCTCCTTCGGGTCCGGGACTCTGGGCTCCACCACCGTGGCCGCCGGCGGGACCGGTACGGGTGGCGGTTTCTCCTTTGGGACCGGAGCGTCTAGCACCCCTTCTTTGGGGCTCAATTTTGGAACTCTTGGAAGTACCACGACACCAGCAACTACATCTGCTCCTTCTGGTTTTGGAACTGGACTCTTTGGATCTAAGCCTGCCACTGGGTTCACTCTAGGAGGAACGAATACAGGAATAGCAACAACTATAGCTTCAGGATTAACTCTGGGAACGCCAGCTACTACATCTGCATCCACCACAGGCTTCAGTTTAGGATTCAATAAACCGGCAGCATCTGCAACACCATTTGCTCTGCCTATCACCTCTACCTCAGCTAGTGGTCTTACTCTTTCATCTGCTCTGACATCAACCCCAGCAGCATCTACAGGATTTACTCTAAATAATTTGGGAGGAACGACATCTACAACTACAACTTCATCTACAGGCCTTTCTTTAGGGGGAACCCTAGCTGGTTTGGGAAGTTCACTTTTCCAGAGTACAAACACAGCAGCGTCAGGACTTGGACAGAATGCTTTAGGTTTGACTTTGGGAACGACAGTAGCCACTTCAACTGTAGGCAATGAAGGCCTTGGTGGTATAGATTTTAGTAGCTCATCAGATAAAAAGAGTGATAAAACAGGAACAAGGCCAGAGGATAGTAAAGCACTGAAAGATGAAAATCTACCTTCTGTCATTTGCCAGGATGTTGAAAACCTCCAGAAATTTGTGAAGGAACAAAAACAGGTTCAAGAAGAAATTAGTAGAATGTCTTCAAAAGCAATGCTTAAAGTACAAGAAGATATTAAAGCTCTGAAACAGCTTCTGTCATTGGCTGCCAGTGGATTACAAAGAAACACTCTCAATATTGACAAACTGAAAATAGAAACTGCTCAGGAGTTAAAGAATGCTGAAATAGCTTTAAGAACCCAGAAAACACCACCTGGACTCCAACATGAAAATACAGCTCCTGCTGACTATTTCAGAATCTTGGTTCAGCAGTTTGAGGTACAGCTTCAGCAGTACAGACAGCAGATTGAAGACCTAGAAAATCATCTTGCCACTCAAGCAAATAATTCACATATAACTCCTCAAGATTTGTCAATGGCTATGCAGAAAATATATCAAACATTTGTAGCTTTAGCTGCACAACTTCAGTCTATTCATGAAAATGTAAAGGTGCTCAAAGAACAATACCTTGGCTATAGGAAAATGTTCTTGGGAGATGCCGTAGATGTGTTTGAGGCCAGGCGGGCAGAAGCTAAGAAGTGGCAGAATACACCCAGAGTTACCACTGGACCCACGCCCTTCAGCACCATGCCAAATGCAGCAGCCATTGCCATGGCTGCAACACTTACACAGCAGCAACAGCCTGCTACAGGGCCACAGCCATCTCTGGGAGTTAGTTTTGGAACGCCATTCGGCTCAGGTATTGGCACTGGCTTGCAATCAAGTGGCTTAGGTTCTTCAAACCTTGGAGGATTTGGAACTAGCTCTGGTTTTGGATCCAGCACCACAGGGGCCTCCACATTTGGATTTGGAACAACAAATAAACCCTCAGGAAGTCTTAGTGCAGGGTTTGGCAGCTCAAGTACATCTGGGTTTAACTTCAGCAATCCTGGCATCACGGCATCAGCTGGTTTGACTTTTGGGGTGTCCAATCCTGCATCTGCAGGTTTTGGAACAGGAGGACAACTCCTTCAGTTGAAGAAACCTCCAGCTGGAAACAAAAGAGGAAAAAGATAA

Related Sequences

XP_004854885.1 Protein

Nupl1 PREDICTED: nucleoporin p58/p45 isoform X1 [Heterocephalus glaber]

Length: 598 aa      View alignments
>XP_004854885.1
MATGFSFGSGTLGSTTVAAGGTGTGGGFSFGTGASSTPSLGLNFGTLGSTTTPATTSAPSGFGTGLFGSKPATGFTLGGTNTGIATTIASGLTLGTPATTSASTTGFSLGFNKPAASATPFALPITSTSASGLTLSSALTSTPAASTGFTLNNLGGTTSTTTTSSTGLSLGGTLAGLGSSLFQSTNTAASGLGQNALGLTLGTTVATSTVGNEGLGGIDFSSSSDKKSDKTGTRPEDSKALKDENLPSVICQDVENLQKFVKEQKQVQEEISRMSSKAMLKVQEDIKALKQLLSLAASGLQRNTLNIDKLKIETAQELKNAEIALRTQKTPPGLQHENTAPADYFRILVQQFEVQLQQYRQQIEDLENHLATQANNSHITPQDLSMAMQKIYQTFVALAAQLQSIHENVKVLKEQYLGYRKMFLGDAVDVFEARRAEAKKWQNTPRVTTGPTPFSTMPNAAAIAMAATLTQQQQPATGPQPSLGVSFGTPFGSGIGTGLQSSGLGSSNLGGFGTSSGFGSSTTGASTFGFGTTNKPSGSLSAGFGSSSTSGFNFSNPGITASAGLTFGVSNPASAGFGTGGQLLQLKKPPAGNKRGKR