Details from NCBI annotation

Gene Symbol Rnf6
Gene Name ring finger protein (C3H2C3 type) 6, transcript variant X2
Entrez Gene ID 101721026

Database interlinks

Part of NW_004624776.1 (Scaffold)

For more information consult the page for NW_004624776.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RNF6 ENSCPOG00000009120 (Guinea pig)

Gene Details

ring finger protein (C3H2C3 type) 6

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008189, Guinea pig)

Protein Percentage 82.22%
CDS Percentage 89.15%
Ka/Ks Ratio 0.48589 (Ka = 0.0974, Ks = 0.2004)

RNF6 ENSG00000127870 (Human)

Gene Details

ring finger protein (C3H2C3 type) 6

External Links

Gene Match (Ensembl Protein ID: ENSP00000371000, Human)

Protein Percentage 81.36%
CDS Percentage 87.48%
Ka/Ks Ratio 0.34547 (Ka = 0.1002, Ks = 0.29)

Rnf6 ENSMUSG00000029634 (Mouse)

Gene Details

ring finger protein (C3H2C3 type) 6

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000124293, Mouse)

Protein Percentage 71.21%
CDS Percentage 77.58%
Ka/Ks Ratio 0.27469 (Ka = 0.1809, Ks = 0.6584)

Rnf6 ENSRNOG00000000968 (Rat)

Gene Details

ring finger protein (C3H2C3 type) 6 (Rnf6), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000001282, Rat)

Protein Percentage 69.74%
CDS Percentage 76.25%
Ka/Ks Ratio 0.24931 (Ka = 0.1872, Ks = 0.751)

Genome Location

Sequence Coding sequence

Length: 2031 bp    Location: 12353846..12362281   Strand: +
>XM_004854824.1
ATGAATCAGTCTGGATCTAGATCAGGTAGTGGTGGTGAAGAAACCTCATCTCAAGACCATAATCATCGTGAAAATGGGAGAAGATGGCAGCAAGAGCGCCTTCTTAGAGAAGAAGCCTATTATCAGTTTATTAATGAGCTCAGTGATGAAGATTATCGGCTGATGAGAGACCACAATCTGTTAGGCACCCCTGGAGAAATAACATCAGAAGAACTACAACAGCGGTTGGATGGAGTGAAGGAGCAGCTAATGTCTCAGCCTGACTTGAGAAATGGGACAAATAACAGAGGCTCACAAGTCCCTAGAGAAAGTTCAAATGAAGATTCTTTGCTAGCATGGCTGCACACCTTTCATCTTACTGGCAATGCGACTCGAAGTGGACAAACTGGGAACCAAACTTGGAGAGCTGTGAATCGAACAAACCCAAACAGTGGAGAGTTTCGGTTTAGTCTGGAAATCGACATAAATAATGAGAACAGAGGATTTGAAATTCGTGAGGAAGATGATACAGGCATTTCACTTTCAGGTATTAACAGAGGTCACACTATAAATAGGCAACAAAGATCTACTAGTCCTGTGGCTAGGAGAACAAGAAGCCAAACCTCAGTGAATTTCAGTGGTGATAATTCCAACATTCCAAGGGCCAGGCTTAGTTCAAGGAGGCAGAATTCAGTTGATAGATCACTCTCAACACTGAGAAGGTTAAGAAATAGAACTGGGAGAGCAGTTGGCATTCCTAGAACTAGTACTTCAAGCAATAACTTTAGTAGTCAAACAAGTCAATCAGGTGGCAGTGAACTCAGGCAAAGGGAGGGGCAGAGATTTGGAGCAGCACATATTTGGGAAAACGGGGCTAGAACTAATGTTACAGTGAGGAATACAAACCAAAGATTAGAGCCAATAAGATTGCGGTCTACTTTCAGTAGTCGAAGCCGTTCACCAATTCAGAGACAGAGTGGAACTGTTCATAACTCCCAAAGGGAAAGTCGACCTTCATGGCAAACCATTAGGAGGTCTGCGAGGAGAAGAGGTATAACTCAGGTCTTTTTAGAGCCAGATAGAGAACACAGAGGCACTGCCTATTCCCGATTTTCTAATTCAAGACTTGTGTCAAGAATAACAGAAGAAGGGGAAGAATCCAATACATCGTCACTTGCTGCACAACGGCATCCAACAATTACACTGGACCTTCAAGTAAGAAGGATCCGTCCTGGAGAAGATAGAGATCAGGATAGTATTGCAAATAGAACTCGATCTAGAACAGGGCAAGGAGAAAACACAATCACTGTTGAAAGCAATAGTGGGGGCTTTCACAGAACTATTTCTCGTTTAGAGCGGTCAGGTATTCGAACCTATGTTAGTGCCGTAACAGTTCCTCTTCAGAGGATTTCTGAGAATGAGCTTGTTGAGCCATCCTCAGTGGCTCTTCGGTCAATGTTTAGGCAGGTCATGACTGGGTTTGGAGAACTAAGTTCTCTAATGGAGGCTGAGTCAGAGTCAGAGATTCAGAGAAATGGTCAGCATTTGCCAGACCTGAGTAATTTAGGTACAGTTGATGACAGTGGCCAGCACAGTGAAAGTTCTTCTCAACACAGGCGAGCCCAAGAAGACAGCACTGAAATGCTAGGTGAAAATGAGATCACCCAGCCTCAGAACAGAAGCAGTGACAGTAGAAGTAGTCCGCAGATGCAAAATTCAAACAATTTTGTAGAAACCAGAACACTACCTATTTTCCGCCTTGCTCATTTCTTTTTATTAAATGAAAGTGAGGATGATCAAAGATGTGGTTTAACCAAAGAACAGATTGACAATCTTTCCACCCGGAACTATGAGCATAGTGGTATTGACAGTGAACTAGGTAAAATTTGTAGTGTTTGTATCAGTGACTATGTAACTGGAAACAAGCTCAGGCAGTTACCTTGCATGCATGAATTTCACATTCACTGTATTGACCGATGGCTGTCAGAGAATTGCACTTGCCCAATCTGTCGGCAGCCTGTTTTAGGATCTGGACTAGCAAACAATGGGTGA

Related Sequences

XP_004854881.1 Protein

Rnf6 PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform X2 [Heterocephalus glaber]

Length: 676 aa      View alignments
>XP_004854881.1
MNQSGSRSGSGGEETSSQDHNHRENGRRWQQERLLREEAYYQFINELSDEDYRLMRDHNLLGTPGEITSEELQQRLDGVKEQLMSQPDLRNGTNNRGSQVPRESSNEDSLLAWLHTFHLTGNATRSGQTGNQTWRAVNRTNPNSGEFRFSLEIDINNENRGFEIREEDDTGISLSGINRGHTINRQQRSTSPVARRTRSQTSVNFSGDNSNIPRARLSSRRQNSVDRSLSTLRRLRNRTGRAVGIPRTSTSSNNFSSQTSQSGGSELRQREGQRFGAAHIWENGARTNVTVRNTNQRLEPIRLRSTFSSRSRSPIQRQSGTVHNSQRESRPSWQTIRRSARRRGITQVFLEPDREHRGTAYSRFSNSRLVSRITEEGEESNTSSLAAQRHPTITLDLQVRRIRPGEDRDQDSIANRTRSRTGQGENTITVESNSGGFHRTISRLERSGIRTYVSAVTVPLQRISENELVEPSSVALRSMFRQVMTGFGELSSLMEAESESEIQRNGQHLPDLSNLGTVDDSGQHSESSSQHRRAQEDSTEMLGENEITQPQNRSSDSRSSPQMQNSNNFVETRTLPIFRLAHFFLLNESEDDQRCGLTKEQIDNLSTRNYEHSGIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVLGSGLANNG