Sequence details NCBI ID: XM_004854809.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol unclassified transcription discrepancy
Gene Name mRNA
Entrez Gene ID 101715383

Database interlinks

Part of NW_004624776.1 (Scaffold)

For more information consult the page for NW_004624776.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

GSX1 ENSG00000169840 (Human)

Gene Details

GS homeobox 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000304331, Human)

Protein Percentage 95.08%
CDS Percentage 89.77%
Ka/Ks Ratio 0.02657 (Ka = 0.0207, Ks = 0.7809)

Gsx1 ENSMUSG00000053129 (Mouse)

Gene Details

GS homeobox 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000069728, Mouse)

Protein Percentage 95.4%
CDS Percentage 87.23%
Ka/Ks Ratio 0.01626 (Ka = 0.0195, Ks = 1.1989)

Gsx1 ENSRNOG00000000952 (Rat)

Gene Details

GS homeobox 1 (Gsx1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000001260, Rat)

Protein Percentage 95.02%
CDS Percentage 87.87%
Ka/Ks Ratio 0.01927 (Ka = 0.0211, Ks = 1.0939)

Genome Location

Sequence Coding sequence

Length: 1056 bp    Location: 10707349..10705843   Strand: -
Raw sequence   
>XM_004854809.1
ATGGCAATAGTCCTATTTAAGCGCCGCCGCCGGCGCCTTTCAGCACCACTAGCGCTGGCCAGCACCCCGCGCTCTCCGGGCGCGGGCGCTGGCGGCAGCAGAGGCTGCGCCTGCGTCTTCTGCCTCTGGCGAGCCTTCAGCCTCCCGCGTGGAGGCAGCTGCGGACGGCCGCGGCCGGGGAAAGCGCTTGGAGAGCCCGGAGGTCCCGCGGGAGCAGAGGGCGAGCTGGCGGCGGGGCGGCCGCGCGCCGGGGCCATGCCGCGCTCCTTCCTTGTTGACTCGCTGGTGTTGCGCGAGGCGGGCGAGAAGAAGGCGCCAGAGGGCAGCCCGCCTCCGCTCTTTCCCTACTCGGTTCCCCCGCCGCACGCGCTGCATGGTCTCTCGCCCGGCGCCTGCCACGCGCGCAAAGCCGGGCTGCTATGCGTGTGTCCGCTCTGCGTCACCGCCTCGCAGCTGCACGGGCCCCCAGGGCCGCCCGCGCTGCCGCTGCTCAAGGCATCCTTCCCACCCTTCGGCTCGCAGTACTGCCACGCACCCCTGGGCCGCCAGCACACGGCCATGTCGCCCGGGGTCGCCCATGGCCCGGCAGCCGCCGCCGCCGCCGCCGCCGCGCTCTACCAAACTTCCTACCCGCTGCCGGACCCCAGGCAGTTTCACTGCCTCTCCGTGGACAGCAGCTCGAACCAGCTGCCCAGCAGCAAGAGGATGCGCACGGCGTTCACTAGCACGCAGCTGCTGGAACTGGAGCGCGAGTTCGCCTCCAATATGTACCTGTCCCGCCTTCGCCGCATCGAGATCGCGACTTACCTGAACCTGTCGGAGAAGCAGGTGAAGATCTGGTTTCAGAACCGCCGGGTAAAGCACAAGAAGGAGGGAAAGGGCACCAACCACCGCGGGGGCGCAGGGGGCGCCGCGGCGGGGGCCGGCGGGGGCGGCGCGCAAGGCTGCAGGTGTGCTTCGCTCTCCTCGGCCAAGTGCTCCGAGGATGACGACGAGTTGCCTATGTCTCCGTCCTCCTCGGGGAAGGACGACCGGGACCTCTCGGTCACTCCGTAG

Related Sequences

XP_004854866.1 Protein

unclassified transcription discrepancy PREDICTED: LOW QUALITY PROTEIN: GS homeobox 1 [Heterocephalus glaber]

Length: 351 aa      
>XP_004854866.1
MAIVLFKRRRRRLSAPLALASTPRSPGAGAGGSRGCACVFCLWRAFSLPRGGSCGRPRPGKALGEPGGPAGAEGELAAGRPRAGAMPRSFLVDSLVLREAGEKKAPEGSPPPLFPYSVPPPHALHGLSPGACHARKAGLLCVCPLCVTASQLHGPPGPPALPLLKASFPPFGSQYCHAPLGRQHTAMSPGVAHGPAAAAAAAAALYQTSYPLPDPRQFHCLSVDSSSNQLPSSKRMRTAFTSTQLLELEREFASNMYLSRLRRIEIATYLNLSEKQVKIWFQNRRVKHKKEGKGTNHRGGAGGAAAGAGGGGAQGCRCASLSSAKCSEDDDELPMSPSSSGKDDRDLSVTP