Details from NCBI annotation

Gene Symbol Pdx1
Gene Name pancreatic and duodenal homeobox 1
Entrez Gene ID 101715013

Database interlinks

Part of NW_004624776.1 (Scaffold)

For more information consult the page for NW_004624776.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PDX1 ENSCPOG00000024534 (Guinea pig)

Gene Details

pancreatic and duodenal homeobox 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000019973, Guinea pig)

Protein Percentage 81.99%
CDS Percentage 82.62%
Ka/Ks Ratio 0.19855 (Ka = 0.1172, Ks = 0.5901)

PDX1 ENSG00000139515 (Human)

Gene Details

pancreatic and duodenal homeobox 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000370421, Human)

Protein Percentage 91.52%
CDS Percentage 88.1%
Ka/Ks Ratio 0.05657 (Ka = 0.04, Ks = 0.7065)

Pdx1 ENSMUSG00000029644 (Mouse)

Gene Details

pancreatic and duodenal homeobox 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000082729, Mouse)

Protein Percentage 84.45%
CDS Percentage 80.92%
Ka/Ks Ratio 0.06925 (Ka = 0.0789, Ks = 1.1395)

Pdx1 ENSRNOG00000046458 (Rat)

Gene Details

pancreatic and duodenal homeobox 1 (Pdx1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000066935, Rat)

Protein Percentage 85.87%
CDS Percentage 81.51%
Ka/Ks Ratio 0.06601 (Ka = 0.0723, Ks = 1.0954)

Genome Location

Sequence Coding sequence

Length: 861 bp    Location: 10596676..10591855   Strand: -
>XM_004854808.1
ATGAATGGCGAGGAGCAGTACTACGCGGCCACACAGCTTTACAAGGACCCGTGTGCGTTCCAGAGGGGCCCGGTGCCAGACTTCAGTGCCAGCCCTCCCGCATGCTTGTATATGGGCCGTCAGCCACCGCCGCCACCGCCGCCACCCACGTTCCCAGGCGCCCTGGGAGCGCTGGAGCAGGGGAGCCCCACGGACATCTCCCCTTACGAGGTCCCCGCCCTCTCCGAAGACCCCACGGTGGCGCACCTGCATCACCACCTCCCTGCTCAGCTCGCGCTCCCCCACCCGTCTGCCGGACCCTTCCCGGATGGAACGGAGCCAGGAGCCCTGGAAGAGCCCAGCCGCATTCAACTACCATTCCCGTGGATGAAGTCCACCAAAGCTCACGCGTGGAAAGGCCAGTGGGCAGGCAGCGCCTATGCGGCCGAGCCGGAGGAGAACAAGCGGACGCGGACGGCCTACACGCGCGCACAGCTGCTGGAGCTGGAGAAGGAGTTCCTGTTCAACAAGTACATCTCTCGGCCGCGCCGGGTGGAGCTGGCGGTAATGCTGAACTTGACCGAGAGACACATCAAGATCTGGTTCCAAAATCGCCGTATGAAGTGGAAAAAGGAGGAGGACAAAAAGCGGGGCGGCAGCGGCGGGGCTGCGACCCGGGATGGCGGGGGAGCGGAGCCCGAGCAGGACTGCGCTGTGACCTCGGGCGAAGAGCTGATGGCGCTGCCACCGCCGCCACCCCCGGGGGGTGCTGTGCCACCCGCTGCCCCCGCCGCCGCCCGAGAGGGCCGCCTGCCTCCGGGCCTGAGCGCTTCGCCTCGGCCCTCCAGCGTTGCGTCCCGGCGCCCGCAGGAACCTCGGTGA

Related Sequences

XP_004854865.1 Protein

Pdx1 PREDICTED: pancreas/duodenum homeobox protein 1 [Heterocephalus glaber]

Length: 286 aa      View alignments
>XP_004854865.1
MNGEEQYYAATQLYKDPCAFQRGPVPDFSASPPACLYMGRQPPPPPPPPTFPGALGALEQGSPTDISPYEVPALSEDPTVAHLHHHLPAQLALPHPSAGPFPDGTEPGALEEPSRIQLPFPWMKSTKAHAWKGQWAGSAYAAEPEENKRTRTAYTRAQLLELEKEFLFNKYISRPRRVELAVMLNLTERHIKIWFQNRRMKWKKEEDKKRGGSGGAATRDGGGAEPEQDCAVTSGEELMALPPPPPPGGAVPPAAPAAAREGRLPPGLSASPRPSSVASRRPQEPR