Details from NCBI annotation

Gene Symbol Cdx2
Gene Name caudal type homeobox 2
Entrez Gene ID 101714659

Database interlinks

Part of NW_004624776.1 (Scaffold)

For more information consult the page for NW_004624776.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CDX2 ENSCPOG00000007276 (Guinea pig)

Gene Details

caudal type homeobox 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006555, Guinea pig)

Protein Percentage 98.71%
CDS Percentage 94.21%
Ka/Ks Ratio 0.0175 (Ka = 0.0056, Ks = 0.3172)

CDX2 ENSG00000165556 (Human)

Gene Details

caudal type homeobox 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000370408, Human)

Protein Percentage 98.07%
CDS Percentage 91.53%
Ka/Ks Ratio 0.01762 (Ka = 0.0085, Ks = 0.484)

Cdx2 ENSMUSG00000029646 (Mouse)

Gene Details

caudal type homeobox 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000031650, Mouse)

Protein Percentage 93.55%
CDS Percentage 87.63%
Ka/Ks Ratio 0.04571 (Ka = 0.0307, Ks = 0.6708)

Cdx2 ENSRNOG00000032759 (Rat)

Gene Details

caudal type homeo box 2 (Cdx2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000045045, Rat)

Protein Percentage 95.81%
CDS Percentage 88.06%
Ka/Ks Ratio 0.02668 (Ka = 0.019, Ks = 0.7122)

Genome Location

Sequence Coding sequence

Length: 936 bp    Location: 10551503..10556845   Strand: +
>XM_004854807.1
ATGTACGTGAGCTACCTCCTGGACAAGGACGTGAGCATGTACCCCAGCTCCGTGCGCCACTCTGGCAGCCTCAACCTGGCGCCGCAGAACTTCGTCAGCCCCCCGCAGTACCCGGACTACGGCGGTTACCACGTGGCGGCCGCAGCAGCCGCGGCCGCGAACTTGGACAGCGCGCAGTCCCCGGGGCCGTCCTGGCCGCCCGCGTACGGCGCCCCGCTCCGGGAGGACTGGAACGGCTACGCGCCTGGGGGAGCAGCGGCCGCAGCCAACGCGGTGGCCCATGGCCTCAACGGGGGCTCCCCGGCAGCCGCCATGGGCTACAGCAGCCCCGCCGATTACCACCCACACCACCACCCGCACCACCACCCACACCACCCGGCCGCCGCGCCTTCCTGCGCTTCGGGGTTGCTGCAGACGCTCAACCCTGGCCCTCCCGGGCCCGCCGCCACGGCCGCCGCCGAACAGCTGTCCCCCAGCGGCCAGAGGCGGAATCTGTGCGAGTGGATGCGGAAGCCCGCACAGCCATCCCTTGGAAGCCAAGTGAAAACCAGAACGAAAGACAAATACCGAGTCGTGTACACTGACCACCAGCGGCTGGAGCTGGAGAAGGAGTTTCACTATAGTCGTTACATCACCATCCGGAGGAAGGCTGAGCTGGCTGCCACGCTGGGGCTCTCAGAGAGGCAGGTTAAAATTTGGTTTCAGAACCGAAGAGCAAAGGAAAGGAAAATCAACAAGAAGAAATTGCAGCAACAGCAGCAACAGCAACAGCCCCCACCGCCTCCACCACAGCCTCCCCAGCAGCAGCCAGGACCTCTGAGAAGTGTCCCCGAGCCCTTGAGTCCTGTGTCTTCCCTGCAAGGCTCAGTGCCTGGCTCTGTCCCTGGGGTTCTGGGGCCGACCGGGGGCGTGTTAAACCCCACTGTCACCCAGTGA

Related Sequences

XP_004854864.1 Protein

Cdx2 PREDICTED: homeobox protein CDX-2 [Heterocephalus glaber]

Length: 311 aa      View alignments
>XP_004854864.1
MYVSYLLDKDVSMYPSSVRHSGSLNLAPQNFVSPPQYPDYGGYHVAAAAAAAANLDSAQSPGPSWPPAYGAPLREDWNGYAPGGAAAAANAVAHGLNGGSPAAAMGYSSPADYHPHHHPHHHPHHPAAAPSCASGLLQTLNPGPPGPAATAAAEQLSPSGQRRNLCEWMRKPAQPSLGSQVKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKERKINKKKLQQQQQQQQPPPPPPQPPQQQPGPLRSVPEPLSPVSSLQGSVPGSVPGVLGPTGGVLNPTVTQ