Sequence details NCBI ID: XM_004854802.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Pan3
Gene Name PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae), transcript variant X3
Entrez Gene ID 101711937

Database interlinks

Part of NW_004624776.1 (Scaffold)

For more information consult the page for NW_004624776.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PAN3 ENSCPOG00000013349 (Guinea pig)

Gene Details

PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012017, Guinea pig)

Protein Percentage 98.11%
CDS Percentage 96.26%
Ka/Ks Ratio 0.06742 (Ka = 0.0088, Ks = 0.1305)

PAN3 ENSG00000152520 (Human)

Gene Details

PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSP00000370345, Human)

Protein Percentage 97.35%
CDS Percentage 95.31%
Ka/Ks Ratio 0.08234 (Ka = 0.0126, Ks = 0.153)

Pan3 ENSMUSG00000029647 (Mouse)

Gene Details

PAN3 polyA specific ribonuclease subunit homolog (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000031651, Mouse)

Protein Percentage 95.15%
CDS Percentage 91.47%
Ka/Ks Ratio 0.07855 (Ka = 0.0246, Ks = 0.3128)

Pan3 ENSRNOG00000000942 (Rat)

Gene Details

Protein Pan3

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000040388, Rat)

Protein Percentage 95.27%
CDS Percentage 91.03%
Ka/Ks Ratio 0.0722 (Ka = 0.0238, Ks = 0.3295)

Genome Location

Sequence Coding sequence

Length: 2496 bp    Location: 10364650..10225617   Strand: -
Raw sequence   
>XM_004854802.1
ATGAACAGTGGCGGCGGCCTCCCGCCCCCCTCGGCCGCCGCCTCCTCTTCGTCCTCCTCGCTGGCGGCGGCAGTGGCGGTGGTGGCCCCGCCGGGGGTCGGGGGTGTCCCCGGCGGGGCGGCGGCGGGAGTGAAGCTGAAGTACTGCCGCTACTACGCAAAGGATAAGACTTGCTTCTACGGGGAGGAGTGTCAGTTCCTACATGAGGACCCAGCCGCCGGGGCCGCCCCGGGCCTCGGCCTCCATAGCAACAGCGTCCCTCTGGCTCTGGTCGGCGCGCCCGGCTTTCCGCCCGGAGCTGCGCCAGGAGGGGGAGCCGGGCCGCCCTCGGGACCCAAGAAGCCGGACCTGGGGGGCTCGGGGGCCGGAGCCGCAGCCGGCGGCGGCGGAGGCAGCAGCGGACTTGATGGACCGCGGCTGGCAATTCCTGGAATGGATGGAGGTGCTTTAACTGATACGAGTCTCACAGATTCCTATTTCAGCACCAGCTTTATTGGAGTCAATGGATTTGGAAGCCCAGTAGAAACAAAGTATCCCTTGATGCAGAGAATGACTAATAGTAGCAGCTCCCCAAGCCTTCTAAATGACAGTGCCAAGCCATATGCAGGCCATGATCCTCTAACTTCACCTGCTTCATCCTTGTTTAATGACTTTGGTGCCCTCAACATCTCTCAGAGAAGAAAGACTCCAAATCCTACTGCAAGCGAGTTTATTCCTAAAGGAGGATCAACCTCCAGGCTGAGTAACGTGTCCCAGTCAAATATGTCTGCCTTCTCTCAAGTTTTCTCTCACCCATCCATGGGAAGTCCTGCTACTGCTGGATTAGCACCAGGAATGTCATTGTCTGCGGGATCTTCCCCTCTTCATTCCCCCAAGATTACTCCCCATACTTCTCCTGCTCCCAGAAGAAGAAGCCACACTCCAAACCCAGCAAGTTACGTGCTGCCTTCTAGTGCCTCTACACCTGTTAATAATCCTGTTTCTCAGACTCCATCTTCTGGTCAGGTGATTCAGAAGGAAACTGTTGGTGGGACGACTTACTTCTATACAGACACAACTCCAGCACCTTTGACTGGAATGGTATTTCCAAACTATCATATTTATCCTCCAACTGCACCTCATGTTGCTTATATGCAACCAAAAGCAAATGCACCTTCCTTCTTCATGGCTGACGAACTCCGACAGGAGCTGATCAACAGACATTTAATAACAATGGCTCAAATTGATCAATCAGATATGCCAGCAGTCCCCACAGAAGTTGACAGCTACCATAGTCTATTCCCTTTAGAACCACTGCCACTCCCAAACCGTATTCAGAAATCAAGTAATTTTGGATACATTACATCTTGCTACAAAGCTGTAAATAGCAAAGATGATCTGCCATATTGCCTTCGGAGGATACATGGTTTTCGTCTTGTTAACACAAAGTGCATGGTGTTGGTTGATATGTGGAAAAAAATTCAGCACTCAAATATTGTAACCCTGCGTGAAGTATTTACCACTAAAGCATTTGCAGAGCCTTCACTTGTGTTTGCATATGATTTCCATGCTGGAGGAGAAACTGTGATGAGCAGACACTTTAATGACCCTAATGCTGATGCCTATTTCACCAAAAGAAAGTGGGGTCAACACGATGGACCATTGCCCAGGCAGCATGCTGGATTATTGCCAGAATCTCTCATTTGGGCATACATTGTCCAACTGAGTTCTGCATTGCGTACCATTCATACAGCAGGTTTGGCATGTCGAGTTATGGACCCAACAAAGATTCTGATAACTGGCAAAACAAGGTTGCGAGTAAATTGTGTTGGAGTTTTTGATGTTTTAACATTTGATAACAGTCAAAATAATAATCCACTGGCATTAATGGCACAGTACCAGCAAGCAGATCTGATATCATTAGGAAAAGTTGTGTTGGCTTTGGCTTGCAACTCTTTGGCAGGAATTCAGAGAGAGAATTTACAGAAAGCCATGGAATTGGTGACAATCAACTATTCTTCTGACCTGAAGAATCTGATCTTGTATTTGTTGACTGACCAAAACAGGATGCGAAGTGTAAATGACATCATGCCCATGATTGGTGCTCGATTTTATACTCAATTGGATGCTGCTCAAATGAGAAATGATGTCATTGAAGAAGACCTTTCAAAGGAGGTTCAAAATGGAAGACTGTTTAGGCTCCTAGCAAAATTGGGAACAATCAATGAGAGGCCGGAGTTTCAAAAGGATCCTACTTGGTCAGAGACTGGAGACCGTTATCTGTTGAAACTCTTTAGGGATCATCTTTTTCATCAGGTGACAGAAGCGGGTGCTCCTTGGATTGACCTCAGTCATATCATTTCTTGTCTTAACAAGCTAGATGCTGGAGTGCCAGAAAAAATAAGCCTGATTTCCAGAGATGAGAAGAGTGTACTTGTGGTAACTTACAGTGACTTAAAGCGCTGCTTTGAAAATACTTTTCAAGAACTGATGGCAGCTGCAAATGGCCAGTTGTAG

Related Sequences

XP_004854859.1 Protein

Pan3 PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit 3 isoform X3 [Heterocephalus glaber]

Length: 831 aa      View alignments
>XP_004854859.1
MNSGGGLPPPSAAASSSSSSLAAAVAVVAPPGVGGVPGGAAAGVKLKYCRYYAKDKTCFYGEECQFLHEDPAAGAAPGLGLHSNSVPLALVGAPGFPPGAAPGGGAGPPSGPKKPDLGGSGAGAAAGGGGGSSGLDGPRLAIPGMDGGALTDTSLTDSYFSTSFIGVNGFGSPVETKYPLMQRMTNSSSSPSLLNDSAKPYAGHDPLTSPASSLFNDFGALNISQRRKTPNPTASEFIPKGGSTSRLSNVSQSNMSAFSQVFSHPSMGSPATAGLAPGMSLSAGSSPLHSPKITPHTSPAPRRRSHTPNPASYVLPSSASTPVNNPVSQTPSSGQVIQKETVGGTTYFYTDTTPAPLTGMVFPNYHIYPPTAPHVAYMQPKANAPSFFMADELRQELINRHLITMAQIDQSDMPAVPTEVDSYHSLFPLEPLPLPNRIQKSSNFGYITSCYKAVNSKDDLPYCLRRIHGFRLVNTKCMVLVDMWKKIQHSNIVTLREVFTTKAFAEPSLVFAYDFHAGGETVMSRHFNDPNADAYFTKRKWGQHDGPLPRQHAGLLPESLIWAYIVQLSSALRTIHTAGLACRVMDPTKILITGKTRLRVNCVGVFDVLTFDNSQNNNPLALMAQYQQADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLSKEVQNGRLFRLLAKLGTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVVTYSDLKRCFENTFQELMAAANGQL