Sequence details NCBI ID: XM_004854783.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Uspl1
Gene Name ubiquitin specific peptidase like 1, transcript variant X2
Entrez Gene ID 101704481

Database interlinks

Part of NW_004624776.1 (Scaffold)

For more information consult the page for NW_004624776.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

USPL1 ENSCPOG00000009937 (Guinea pig)

Gene Details

ubiquitin specific peptidase like 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008916, Guinea pig)

Protein Percentage 73.44%
CDS Percentage 82.84%
Ka/Ks Ratio 0.49501 (Ka = 0.1505, Ks = 0.3041)

USPL1 ENSG00000132952 (Human)

Gene Details

ubiquitin specific peptidase like 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000255304, Human)

Protein Percentage 72.78%
CDS Percentage 82.65%
Ka/Ks Ratio 0.46736 (Ka = 0.1675, Ks = 0.3584)

Uspl1 ENSMUSG00000041264 (Mouse)

Gene Details

ubiquitin specific peptidase like 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000113247, Mouse)

Protein Percentage 61.54%
CDS Percentage 73.17%
Ka/Ks Ratio 0.42773 (Ka = 0.2741, Ks = 0.6407)

Uspl1 ENSRNOG00000000909 (Rat)

Gene Details

ubiquitin specific peptidase like 1 (Uspl1), transcript variant 2, mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000064429, Rat)

Protein Percentage 59.19%
CDS Percentage 71.37%
Ka/Ks Ratio 0.39171 (Ka = 0.2912, Ks = 0.7435)

Genome Location

Sequence Coding sequence

Length: 2658 bp    Location: 7698646..7662663   Strand: -
Raw sequence   
>XM_004854783.1
ATGCCATGGGAGAGAACATGTTCATCATTTTGCCACACTTCATGTGTCCAGTGGAGAAATGCTAATGCTCTCTGCTGGTTAGATTCTATCCTGACAGCTTTGGTGCATTTGGAAGCCTTGAAGAACATTGTGACTGATTTGTGTCCTAAGGACTCTGTATTTTGGAGGTTGTTTGAAAAATATAATCAAGCAAATAAGCTCCTGCACACCAGTCAGTCAGATGAAGTTAAAGGTGGAAATTATAAAAAACTTACTTCAGAAATATCTGCAGAAATAGAGACCTGTCTGAATGAAATTAGAGATGAAGTTTTTACTAAACTTCAGCCCCAGCTTAGATGCACATTAGGTGAAAGGGAGAGCCCTGTGTTTGCATTTCCTCTCCTCTTAAGAACTGAAGCCCGTGTCGAAAAGCTCTTCACATATTCTTTTTCATGGGAGTTTGAATGTTCACAGTGTGGGCACCGATACCAAAACAGGTGTGTGAAGAATCTAGTCACCTTTACAAATGTCATCCCTGAGTGGCACCCACTTAATGCTGCCCACTTTGGCCCATGTAACAGTTGCAGCAGTAAATCACAAAGAAGGAAAATGGTATTGGAAAGAATGTCTCCCATATTCATGTTGCACTTCGTAGAAGGTTTACCACGGAGTGACTTGCAGCACTATGCATTTCATTTTGAAGGCTGTCTTTATCAAATAACATCTGTAATTCAGTACCAAGCAAATGATCATTTCATAACATGGAATTTACATGCTGATGGAAGTTGGCTGGAATGTGATGACCTAAAAGGTTTATGTGCTCAAAGGCACGAGAAATTGGAAGTTCCCGCTTCAGAGATACATATTGTTATCTGGGAAAGAAAAACATCTCAAGCGACAGATGAAGAAGCTGCCTGCCTTCCACTTAAGAAGACTAATGATCAGCCTGCTTCCAGTGAAGAGAAACCAGCATCTCCAGCATTGCATTCTGTGGGTCAGGCTGCCTCAGCAGGAGCGACCTCGGTCATTCTACCCACATCTCTGACACTTGCTCCTCATACTCTTCCACAGGACAAAGCTGTGGCTCATGAAGATTGCATACTTTCAGATCCAAAAGTTTGGGTTGACAATAATATTTTACCTCTGACACTTCAAGGAACTGTCTGGAAAACTGCCTCAGTTTTTCAGGTTAGCACTGAAGCATTCCTACCAGAAAACATGCCTGTGGCAGAAAATAAAGAATTTGTCAAAACAAACACTTTGCAATCTCAAAAATCACCAGTGTCTTCTTCACTGTCAGCTCCGTGTAAAGAAAAGCTTATCCAAGCCCAGTTCATGGATTTAAGTTTCCCATTGCAAATTGTAAATACAAACACACAGTTGGTACAGCTGAGTACAGAAGATACTGCAGTTACTCAGCCTGAGAATAATACTTATGTTGCTGGTCTTATACAGGGAATAAAGTCAGTGGAAGTTGAAAAGGATACTCAGTTAAAACAATCTGTTTCATGGAAAACTGAGAAATTAGAACCAGAACAGCCTTCTATATCTCAGGTATCTAATTTGAAGAAAAAAGCTACAGCAGATCCACATTCTGTGACAGCCAGCTCATCACAGAATCAGCCCCTGAAAGAAAATCAGAAGAAACCCTTTGTGGGAAGTTGGGTTAAAGGCCTGCTAAGCAGGGGTGCTTCTTTTATGCCGTCTTGTGTTTCAGCTCATAGTAGAAACACTGTAACTAATTTGCAGCCTTCAGTTAAAGGGGCAAATAATTTTGGTGGCTTTAAAACTAAAAGTATAAAGCAAAAGACTAGCCATGTATCTAAGAAAGCTTGTAGATCTGCAGATAAGTCTTCTGCATTCAGCAACCCTCCACCAGGTCTTCCACTGTCAGAGAACACAGCTGCTCATTCACATACAAATGAGAATGCTGCTTCAGAACTTCTGAAGAAGCGGGAAAGCACCTCACATGGCGCTTACCTCAATCACCCTTCTCACAGAAGGGAAAATGGGACTTCTTCAGCAAACCATGGAGACTCAGCTGAAGGTCAGATTCATAAGCTTCGTCTAAAACTTCTTAAAAAACTAAAGGCCAAAAAGAAGAAGTTAGCTGCTCTCATGTCTTCCCCTCAAAGTGAAACACTTCCTAGTGAAAATTTAGAACATGGGCCCCCTTGTGAGTCTCCAAATGATTGTGAATCAATAGAAGATTTGTTAAATGAACTGCAGTATCAGATTGATATTGCAGATAGTAAGTCTGGATGTGCCACTATTTCTAGTATGTCCTCATATAATAATCAAACTCATGAAGAAATTTTAGCAGAATTGTTGTCTCCTACAAGTATTTCAACAGAGTTCTCAGAAAATGGGGAAACTGACTTTAGGTATTTGGAAATGGGAGACGACCATATCCCAGCCCCAAAACCTACTGAATTAATTGATAATTCCCAGAACATACAACTGAAACAGGAGCATAATTATTGCAGCCCCCCCAAGAGGAACCAATGTGAAGTTCAGCCAGTCTCACAAATAAACAATGCCTGTGTAAGGACATTAAACTTGGAGAGCCCCATGAAGACTGATATCTTTGATGAGTTTTTTTCTACTGCATTAACTTCTTCAGCAAATGACACTTTAGACTTACCTCATTTTGATGAATATCTGTTTGAGAATTATTGA

Related Sequences

XP_004854840.1 Protein

Uspl1 PREDICTED: SUMO-specific isopeptidase USPL1 isoform X2 [Heterocephalus glaber]

Length: 885 aa      View alignments
>XP_004854840.1
MPWERTCSSFCHTSCVQWRNANALCWLDSILTALVHLEALKNIVTDLCPKDSVFWRLFEKYNQANKLLHTSQSDEVKGGNYKKLTSEISAEIETCLNEIRDEVFTKLQPQLRCTLGERESPVFAFPLLLRTEARVEKLFTYSFSWEFECSQCGHRYQNRCVKNLVTFTNVIPEWHPLNAAHFGPCNSCSSKSQRRKMVLERMSPIFMLHFVEGLPRSDLQHYAFHFEGCLYQITSVIQYQANDHFITWNLHADGSWLECDDLKGLCAQRHEKLEVPASEIHIVIWERKTSQATDEEAACLPLKKTNDQPASSEEKPASPALHSVGQAASAGATSVILPTSLTLAPHTLPQDKAVAHEDCILSDPKVWVDNNILPLTLQGTVWKTASVFQVSTEAFLPENMPVAENKEFVKTNTLQSQKSPVSSSLSAPCKEKLIQAQFMDLSFPLQIVNTNTQLVQLSTEDTAVTQPENNTYVAGLIQGIKSVEVEKDTQLKQSVSWKTEKLEPEQPSISQVSNLKKKATADPHSVTASSSQNQPLKENQKKPFVGSWVKGLLSRGASFMPSCVSAHSRNTVTNLQPSVKGANNFGGFKTKSIKQKTSHVSKKACRSADKSSAFSNPPPGLPLSENTAAHSHTNENAASELLKKRESTSHGAYLNHPSHRRENGTSSANHGDSAEGQIHKLRLKLLKKLKAKKKKLAALMSSPQSETLPSENLEHGPPCESPNDCESIEDLLNELQYQIDIADSKSGCATISSMSSYNNQTHEEILAELLSPTSISTEFSENGETDFRYLEMGDDHIPAPKPTELIDNSQNIQLKQEHNYCSPPKRNQCEVQPVSQINNACVRTLNLESPMKTDIFDEFFSTALTSSANDTLDLPHFDEYLFENY