Sequence details NCBI ID: XM_004854777.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Hsph1
Gene Name heat shock 105kDa/110kDa protein 1
Entrez Gene ID 101702785

Database interlinks

Part of NW_004624776.1 (Scaffold)

For more information consult the page for NW_004624776.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

HSPH1 ENSCPOG00000007441 (Guinea pig)

Gene Details

heat shock 105kDa/110kDa protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006712, Guinea pig)

Protein Percentage 97.67%
CDS Percentage 95.03%
Ka/Ks Ratio 0.05852 (Ka = 0.0108, Ks = 0.1843)

HSPH1 ENSG00000120694 (Human)

Gene Details

heat shock 105kDa/110kDa protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000318687, Human)

Protein Percentage 96.03%
CDS Percentage 93.27%
Ka/Ks Ratio 0.07715 (Ka = 0.0195, Ks = 0.2531)

Hsph1 ENSMUSG00000029657 (Mouse)

Gene Details

heat shock 105kDa/110kDa protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000074392, Mouse)

Protein Percentage 94.52%
CDS Percentage 87.18%
Ka/Ks Ratio 0.04174 (Ka = 0.0278, Ks = 0.6653)

Hsph1 ENSRNOG00000000902 (Rat)

Gene Details

heat shock 105/110 protein 1 (Hsph1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000001201, Rat)

Protein Percentage 93.12%
CDS Percentage 86.52%
Ka/Ks Ratio 0.05273 (Ka = 0.0357, Ks = 0.6767)

Genome Location

Sequence Coding sequence

Length: 2577 bp    Location: 6988508..7013621   Strand: +
Raw sequence   
>XM_004854777.1
ATGTCGGTGGTGGGGCTGGACGTGGGCTCGCAGAGCTGCTACATCGCGGTGGCGCGGGCTGGGGGCATCGAGACCATCGCCAACGAGTTCAGCGACCGGTGCACCCCATCAGTCATATCATTTGGATCAAAAAACAGAACAATTGGAGTTGCAGCCAAAAATCAGCAAATCACTCATGCAAACAATACGGTGTCTAACTTTAAGAGATTTCATGGCCGAGCATTCAGTGATCCCTTCATTCAAAAGGAAAAGGAAAACTTAAGTTATGATTTAGTTCCAATGAAAAACGGTGGAGTTGGAATAAAGGTAATGTACATGGATGAAGAACATCTGTTTAGTGTGGAGCAGATAACAGCCATGTTGTTGACTAAGTTAAAGGAAACTGCTGAAAACAACCTCAAGAAACCAGTAACAGATTGTGTTATTTCAGTTCCCTCCTTCTTCACGGATGCTGAAAGGCGATCTGTATTAGATGCTGCACAGATTGTTGGCCTAAATTGTTTAAGGCTTATGAATGATATGACAGCTGTTGCTTTGAATTATGGAATTTATAAGCAGGATCTCCCAAGTCCGGAGGAGAAACCTCGGATAGTCCTCTTTGTTGATATGGGACACTCAGCTTTTCAAGTGTCTGCCTGCGCCTTTAACAAGGGCAAATTGAAGGTACTGGGAACAGCTTTTGATCCTTTCTTAGGAGGGAAAAACTTTGATGAAAAATTAGTGGAACATTTTTGTGCAGAGTTTAAAACTAAGTACAAGTTGGATGCAAAATCCAAAATTCGAGCTCTCCTTCGTCTGTATCAGGAGTGTGAAAAATTAAAAAAGCTAATGAGCTCTAACAGCACAGACCTACCACTGAATATTGAATGCTTTATGAATGACAAAGATGTTTCAGGAAAGATGAACAGGTCACAGTTTGAAGAGCTCTGTGCTGATCTCCTACAAAAAATAGAAGTACCCCTTTATTCACTGATGGAACAAACTCAGCTCAAAGTAGAAGATGTGAGTGCTGTTGAGATAGTTGGAGGCACTACACGAATTCCAGCAGTGAAAGAAAAAATTGCCAAATTCTTTGGAAAAGATGTTAGCACAACACTGAATGCAGATGAAGCAGTAGCCAGAGGGTGCGCACTACAGTGTGCAATCCTTTCTCCAGCATTTAAAGTTAGAGAATTTTCTGTCACAGACTCAGTTCCTTTTCCAATATCTCTGGTATGGAACCATGATTCAGAAGATACTGAAGGGGTTCATGAAGTGTTTAGTCGAAACCATGCTGCTCCTTTCTCTAAAGTTCTCACCTTCTTGAGAAGAGGACCTTTTGAGCTAGAAGCTTTCTATTCTGATCCTCAAGGAGTTCCATATCCAGAAGCAAAAATAGGTCGTTTTGTAGTTCAGAACGTTTCTGCACAGAAAGACGGAGAGAAATCAAAAGTCAAAGTCAAAGTTCGAGTCAACACCCATGGCATTTTCACCATCTCCACAGCCTCTATGGTAGAGAAAATTCCAACTGAAGAGAATGAAGCATCTTCTATTGAAGCAGACATGGAGTGCCCAAATCAGAGACCATCAGAAAACCTAGACACTGAAAAAAATATCCAGCAAGACAACAGTGAAGCTGGAACACAGCCCCAGGTACAAACTGATGGTCAACAAACCTCACAGTCTCCCCCTTCACCTGAACTTACCTCAGAAGAAAACAAAAACCCAGATGCTGACAAAGCAAATGAAAAGAAAGTTGACCAGCCTCCAGAAGCTAAAAAACCCAAAATAAAGGTGGTGAATGTTGAGCTACCTATTGAGGCCAACTTGGTCTGGCAATTAGGGAAGGATCTTCTTAACATGTACATTGAGACAGAGGGGAAGATGATAATGCAGGATAAATTGGAAAAAGAAAGAAATGATGCTAAAAATGCAGTGGAGGAATATGTGTATGAGTTCAGGGACAAGCTGTGTGGACCGTACGAAAAATTCATATGTGAGCAGGAACATCAGAATTTTTTGAGACTCCTCACAGAGACTGAAGACTGGCTGTATGAAGAAGGAGAGGACCAGGCTAAACAAGCATATGTTGACAAGTTGGAAGAGTTAATGAAAATTGGTACTCCAGTTAAAGTCCGATTTCAAGAAGCTGAGGAACGACCAAAAGTGTTGGAAGAACTGGGACAAAGGCTGCAGCACTATGCCAAGATAGCAGCTGACTTCAGAAATAAGGATGAGAAGTATAACCATATTGATGAGTCTGAAATGAAAAAAGTTGAGAAGTCTGTTAATGAAGTGATGGAGTGGATGAATAATGTCATGAATGCTCAGGCTAAAAGGAGTCTTGATCAGGATCCAGTTGTACGTGCTCATGAAATAAAAGCAAAAATCAAGGAATTGAACAATGTTTGTGAACCTGTTGTAACACAACCCAAACCAAAAATCGAATCACCCAAACTGGAAAGAACTCCAAATGGCCCAAATATTGATAAAGAAGAAGATTTAGAAGGCAAAAATAATTTCGGTGCTGAACCTCCACATCAGAATGGTGAATGTTACCCTAATGAGAAGAGTTCTGTTAATATGGACTTGGACTAG

Related Sequences

XP_004854834.1 Protein

Hsph1 PREDICTED: heat shock protein 105 kDa [Heterocephalus glaber]

Length: 858 aa      View alignments
>XP_004854834.1
MSVVGLDVGSQSCYIAVARAGGIETIANEFSDRCTPSVISFGSKNRTIGVAAKNQQITHANNTVSNFKRFHGRAFSDPFIQKEKENLSYDLVPMKNGGVGIKVMYMDEEHLFSVEQITAMLLTKLKETAENNLKKPVTDCVISVPSFFTDAERRSVLDAAQIVGLNCLRLMNDMTAVALNYGIYKQDLPSPEEKPRIVLFVDMGHSAFQVSACAFNKGKLKVLGTAFDPFLGGKNFDEKLVEHFCAEFKTKYKLDAKSKIRALLRLYQECEKLKKLMSSNSTDLPLNIECFMNDKDVSGKMNRSQFEELCADLLQKIEVPLYSLMEQTQLKVEDVSAVEIVGGTTRIPAVKEKIAKFFGKDVSTTLNADEAVARGCALQCAILSPAFKVREFSVTDSVPFPISLVWNHDSEDTEGVHEVFSRNHAAPFSKVLTFLRRGPFELEAFYSDPQGVPYPEAKIGRFVVQNVSAQKDGEKSKVKVKVRVNTHGIFTISTASMVEKIPTEENEASSIEADMECPNQRPSENLDTEKNIQQDNSEAGTQPQVQTDGQQTSQSPPSPELTSEENKNPDADKANEKKVDQPPEAKKPKIKVVNVELPIEANLVWQLGKDLLNMYIETEGKMIMQDKLEKERNDAKNAVEEYVYEFRDKLCGPYEKFICEQEHQNFLRLLTETEDWLYEEGEDQAKQAYVDKLEELMKIGTPVKVRFQEAEERPKVLEELGQRLQHYAKIAADFRNKDEKYNHIDESEMKKVEKSVNEVMEWMNNVMNAQAKRSLDQDPVVRAHEIKAKIKELNNVCEPVVTQPKPKIESPKLERTPNGPNIDKEEDLEGKNNFGAEPPHQNGECYPNEKSSVNMDLD