Details from NCBI annotation

Gene Symbol Taf5l
Gene Name TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa, transcript variant X4
Entrez Gene ID 101719629

Database interlinks

Part of NW_004624775.1 (Scaffold)

For more information consult the page for NW_004624775.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TAF5L ENSCPOG00000006299 (Guinea pig)

Gene Details

TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000015242, Guinea pig)

Protein Percentage 97.45%
CDS Percentage 94.62%
Ka/Ks Ratio 0.06495 (Ka = 0.0127, Ks = 0.196)

TAF5L ENSG00000135801 (Human)

Gene Details

TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa

External Links

Gene Match (Ensembl Protein ID: ENSP00000258281, Human)

Protein Percentage 95.25%
CDS Percentage 89.19%
Ka/Ks Ratio 0.04532 (Ka = 0.023, Ks = 0.5072)

Taf5l ENSMUSG00000038697 (Mouse)

Gene Details

TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000090726, Mouse)

Protein Percentage 94.06%
CDS Percentage 87.04%
Ka/Ks Ratio 0.04369 (Ka = 0.0289, Ks = 0.662)

Taf5l ENSRNOG00000018027 (Rat)

Gene Details

TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor (Taf5l), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000024491, Rat)

Protein Percentage 94.06%
CDS Percentage 87.49%
Ka/Ks Ratio 0.05151 (Ka = 0.0313, Ks = 0.6082)

Genome Location

Sequence Coding sequence

Length: 1770 bp    Location: 19497197..19525489   Strand: +
>XM_004854687.1
ATGAAACGGGTGCGCACCGAGCACGTCCAGATGGCAGTGTCCTGCTACCTCAAGCGTCGGCAGTACGTGGATTCAGATGGCCCACTGAAGCAAGGCCTGCGTCTGTCTCAGACTCCTGAGGAGATGGCCGCCAACCTCACAGTCCAGTCAGAATCTGGTTGTGCCAACATAGTGTCTGCAGCCCCTTGCCAGGCAGAACCCCAGCAATACGAAGTACAGTTTGGACGACTGCGGAATTTTCTCACTGATTCTGATTCCCAGTACAGCCATGAAGTTATGCCTCTTCTCTACCCACTGTTTGTCTACCTCCATCTCAGCCTGGTCCAGAGCAGCCCAAAAAGCACAGTGGAAAGTTTCTATAGCCGCTTCCATGGAATGTTCCTGCAGAATGCAAGCCAGAAGGATGTTATTGAGCAGCTGCAGACAACTCAGACCATCCAGGACATTCTGTCCAATTTCAAGCTTCGTGCATTCCTAGATAACAAGTATGTGGTCCGTCTCCAGGAAGACAGCTACAACTACCTGATCCGCTACCTCCAAAGTGACAACAACACTGCCCTGTGCAAGGTCCTCACCTTACATATCCACCTGGATGTGCAGCCTGCCAAGAGAACAGACTACCAGCTCTACGCCAGTGGTGGCTCCTCCCGAAGTGAGAGCAGCGGCCTGGAGCCCCCGGAAGTGCCCAGCCCCATTCTACAGAATGAGGCTGCACTGGAGGTCTTACAAGAGAGCATCAAACGCGTCAAGGATGGCCCCCCCTCCCTCACCACCATCTGCTTCTACGCCTTCTACAATACAGAGCAGCTGCTGAACACTGCAGAAATTGCCCCCAATAGCAAGCTGCTAGCTGCTGGGTTTGACAACTCCTGTATAAAACTCTGGAGTCTGCGGTCCAAGAAGTTGAAATCAGAGCCCCACCTTGTAGACACATCACATATCCACTTGGCTTGTGATACTCTGGAGGAAGAGGAGGATGAGGAGGACAGCGCAGGCACGGAGATGAAGATCCTGCGGGGACACTGTGGACCAGTGTACAGCACACGTTTCCTCGCGGACAGCTCAGGGTTGCTCTCTTGTTCTGAGGACATGTCCATCAGGTACTGGGATCTGGGGAGTTTCACCAACACTGTGCTGTACCAAGGACATGCCTACCCCGTGTGGGACCTGGACATCAGCCCCTACAGCCTGTACTTTGCCAGTGGGTCCCATGACCGCACCGCCAGGCTGTGGTCCTTCGATCGGACGTACCCACTGAGGATATATGCAGGACACCTGGCAGATGTGGACTGTGTCAGATTCCACCCTAACTCTAACTACTTAGCCACCGGCTCAACCGACAAGACTGTCCGGCTGTGGAGCGCCCAGCAGGGGAACTCAGTGAGGCTCTTCACAGGCCACCGTGGCCCTGTGCTCTCTCTGGCTTTCTCTCCCAATGGGAAGTATTTGGCATCTGCTGGTGAGGACCAGCGGTTAAAACTGTGGGACCTGGCCTCCGGGACCCTTTTTAAAGAGCTGAGAGGCCACACAGACACCATCACCAGCCTCGCCTTCAGCCCTGACAGTGGCCTAGTAGCCTCTGCCTCCATGGACAACTCAGTGCGCGTCTGGGACCTCCGGAACACGTGCTGTAGTGCGCCCGCAGATGGCTCCTCCAGTGAGCTCGTAGGTGTCTACACTGGGCAGATGAGCAGTGTCCTGAGCGTGCAGTTCATGGCCTGCAACCTGCTTCTTGTGACTGGGATCACACAGGAGAATCAGGAACATTGA

Related Sequences

XP_004854744.1 Protein

Taf5l PREDICTED: TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X4 [Heterocephalus glaber]

Length: 589 aa      View alignments
>XP_004854744.1
MKRVRTEHVQMAVSCYLKRRQYVDSDGPLKQGLRLSQTPEEMAANLTVQSESGCANIVSAAPCQAEPQQYEVQFGRLRNFLTDSDSQYSHEVMPLLYPLFVYLHLSLVQSSPKSTVESFYSRFHGMFLQNASQKDVIEQLQTTQTIQDILSNFKLRAFLDNKYVVRLQEDSYNYLIRYLQSDNNTALCKVLTLHIHLDVQPAKRTDYQLYASGGSSRSESSGLEPPEVPSPILQNEAALEVLQESIKRVKDGPPSLTTICFYAFYNTEQLLNTAEIAPNSKLLAAGFDNSCIKLWSLRSKKLKSEPHLVDTSHIHLACDTLEEEEDEEDSAGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVRFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDTITSLAFSPDSGLVASASMDNSVRVWDLRNTCCSAPADGSSSELVGVYTGQMSSVLSVQFMACNLLLVTGITQENQEH