Details from NCBI annotation

Gene Symbol Pgbd5
Gene Name piggyBac transposable element derived 5, transcript variant X2
Entrez Gene ID 101717897

Database interlinks

Part of NW_004624775.1 (Scaffold)

For more information consult the page for NW_004624775.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PGBD5 ENSCPOG00000010542 (Guinea pig)

Gene Details

piggyBac transposable element derived 5

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009464, Guinea pig)

Protein Percentage 99.28%
CDS Percentage 95.73%
Ka/Ks Ratio 0.01424 (Ka = 0.0032, Ks = 0.2225)

PGBD5 ENSG00000177614 (Human)

Gene Details

piggyBac transposable element derived 5

External Links

Gene Match (Ensembl Protein ID: ENSP00000431404, Human)

Protein Percentage 91.47%
CDS Percentage 86.65%
Ka/Ks Ratio 0.03826 (Ka = 0.04, Ks = 1.0442)

Pgbd5 ENSMUSG00000050751 (Mouse)

Gene Details

piggyBac transposable element derived 5

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000054788, Mouse)

Protein Percentage 94.13%
CDS Percentage 86.63%
Ka/Ks Ratio 0.02223 (Ka = 0.0271, Ks = 1.2191)

Pgbd5 ENSRNOG00000026791 (Rat)

Gene Details

piggyBac transposable element derived 5 (Pgbd5), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000054889, Rat)

Protein Percentage 94.87%
CDS Percentage 87.2%
Ka/Ks Ratio 0.0204 (Ka = 0.0228, Ks = 1.1198)

Genome Location

Sequence Coding sequence

Length: 1269 bp    Location: 19023089..19068689   Strand: +
>XM_004854679.1
ATGAGAATCCTGAGCCTCCTTAAAGGTCCAACCCGAAAGATGCCCCCCAATGCCAGTGCCATGGACTTCTTCCAGCTCTTTGTCCCTGACAATGTCCTCAAGAACATGGTGGTGCAGACCAATATGTATGCCAGGAAGTTCCAGGAGCGCTTTGGCAGCGATGGTGCCTGGGCAGAGGTGACACTGGCCGAGATGAAGGCCTTCCTGGGCTATGTGATCTCCACCAGTGTCTCCCACTGTGAATCGGTCCTCAGCATCTGGAGCGGCGGCTTCTACAGCAACCGCAGCCTGGCATTGGTCATGAGCCAGGCTCGCTTCGAGAAGATCCTCAAGTACTTCCACGTGGTGGCCTTCCGCTCCAGCCAGTCCTCGCACGGGCTCTACAAGGTGCAGCCCTTCCTGGATGCCCTGCAGGGAAGCTTCCATGCTGCCTTCCGGCCTTCCCAGACCCAGGTGCTACATGAACCCCTGATTGATGAGGACCCCGTGTTCATCGCCACATGCACAGAACGTGAGCTGCGGAAGAGGAAAAAGCGGAAATTCAGCCTGTGGGTCCGGCAGTGCTCCTCCACTGGCTTCATCGTCCAGATTTACGTCCACTTGAAGGAAGGTGGGGGCCCCGATGGGCTGGACACATTAAAGAGCAAGCCCCAGCTCCACAGCATGGTGGCCAGAAGCCTGTGCCGAGATGCGGCTGGCAAGAACTACATCATCTTCACAGGGCCCAGCATCACCAGCCTGACACTGTTTGAAGAGTTTGAGAAGCAAGGGATCTACTGCTGTGGTCTGCTCAGCCCCCGAAAAAGTGACTGTACAGGTCTCCCACCATCCATGCTGGCCAGCCCCGCCACTCCCCCTGCCCGTGGCCAACACCAGATCAAGACGAAGGGGAATATGTCCCTGATCTGCTGGTACAACAAGGGCCACTTCCGCTTCCTGACCAACGCCTATTCTCCGGTGCAACAAGGTGTCATCATTAAGAGGAGGAGCGGAGAGATCCCCTGTCCCCTGGCCGTAGAGGCCTTTGCTGCCCACCTCAGCTACATCTGCAGATACGATGACAAGTACAGCAAGTACTTCATCTCTCACAAACCCAACAAGACCTGGCAACAGGTGTTCTGGTTTGCCATCAGCATTGCCGTCAATAATGCCTACATCCTATACAAGATGTCAGATGCCTACCACGTGAGCAGGTACAGCCGGGCGCAGTTCGGGGAGAGACTTGTCAGGGAGCTGCTGGGCCTAGAGGATGTGTCGCCGGCCCCCTGA

Related Sequences

XP_004854736.1 Protein

Pgbd5 PREDICTED: piggyBac transposable element-derived protein 5 isoform X2 [Heterocephalus glaber]

Length: 422 aa      View alignments
>XP_004854736.1
MRILSLLKGPTRKMPPNASAMDFFQLFVPDNVLKNMVVQTNMYARKFQERFGSDGAWAEVTLAEMKAFLGYVISTSVSHCESVLSIWSGGFYSNRSLALVMSQARFEKILKYFHVVAFRSSQSSHGLYKVQPFLDALQGSFHAAFRPSQTQVLHEPLIDEDPVFIATCTERELRKRKKRKFSLWVRQCSSTGFIVQIYVHLKEGGGPDGLDTLKSKPQLHSMVARSLCRDAAGKNYIIFTGPSITSLTLFEEFEKQGIYCCGLLSPRKSDCTGLPPSMLASPATPPARGQHQIKTKGNMSLICWYNKGHFRFLTNAYSPVQQGVIIKRRSGEIPCPLAVEAFAAHLSYICRYDDKYSKYFISHKPNKTWQQVFWFAISIAVNNAYILYKMSDAYHVSRYSRAQFGERLVRELLGLEDVSPAP