Details from NCBI annotation

Gene Symbol Capn9
Gene Name calpain 9, transcript variant X1
Entrez Gene ID 101716648

Database interlinks

Part of NW_004624775.1 (Scaffold)

For more information consult the page for NW_004624775.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CAPN9 ENSCPOG00000011780 (Guinea pig)

Gene Details

calpain 9

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010595, Guinea pig)

Protein Percentage 92.16%
CDS Percentage 91.1%
Ka/Ks Ratio 0.12061 (Ka = 0.0399, Ks = 0.3308)

CAPN9 ENSG00000135773 (Human)

Gene Details

calpain 9

External Links

Gene Match (Ensembl Protein ID: ENSP00000271971, Human)

Protein Percentage 86.09%
CDS Percentage 84.78%
Ka/Ks Ratio 0.10864 (Ka = 0.0715, Ks = 0.6583)

Capn9 ENSMUSG00000031981 (Mouse)

Gene Details

calpain 9

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000090717, Mouse)

Protein Percentage 84.49%
CDS Percentage 83.53%
Ka/Ks Ratio 0.09776 (Ka = 0.0793, Ks = 0.8117)

Capn9 ENSRNOG00000018480 (Rat)

Gene Details

calpain 9 (Capn9), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000025357, Rat)

Protein Percentage 83.62%
CDS Percentage 82.85%
Ka/Ks Ratio 0.11265 (Ka = 0.09, Ks = 0.7992)

Genome Location

Sequence Coding sequence

Length: 2073 bp    Location: 18826830..18790527   Strand: -
>XM_004854674.1
ATGCCTTACCTGCACCCAGCTCCAGGGCCCCAGACACACCTTGTTCCCCAGGATGCCCGGGCTACCCACTCCTCAGGAAAGAGCTTTGAGCAGCTGAGGCAGGACTGTCTGCAGGCTGGCACCCTGTTTGAGGACACAGACTTCCCTGCCTGCAATGCCTCCCTGTTCTTCAGCGAGAGGCCCCAGGTTCCTTTCGTGTGGAAACGGCCAGGGGAGATCGTGGAACACCCGGAATTCATCCGTGGAGGGGCCACCAGGACCGACATCTGCCAGGGGGAGCTGGGGGACTGCTGGCTGCTGGCTGCCATTGCCTCCCTCACGCTCAATGAGAAGGCACTGGCCAGAGTGGTCCCCCAGGACCAGAGCTTCGGGCCTGGCTATGCCGGAATATTCCACTTCCAGTTCTGGCAGCACAGTGAGTGGCTGGATGTGGTGATCGACGACCGCCTGCCCACCTTCAGGGACCGCCTGGTCTTCCTGCACTCAGCCGACCACTGTGAGTTCTGGAGCGCTTTGCTGGAGAAAGCCTATGCCAAGCTGAATGGGAGCTATGAGGCACTGAAGGGGGGCAGCACCATCGAGGCCATGGAGGACTTCACCGGTGGTGTGGCTGAGATTTTCCACACCAGAGAGGCACCGAAGGATTTCTACCAGATTCTGGAGAAGGCGCTGAGGCGTGGCTCCCTGCTAGGCTGTTCCATGGATATCAGAAATGCTGCAGAATCTGAAGCCCGTACACCTTTTGGTCTAATTAAGGGCCATGCCTACACCGTGACTGGAATTGATCAGGTAAATTTCCGAGGCCAGAAAACTGAGCTCATCCGAGTCCGGAACCCTTGGGGCCAGGTGGAGTGGAATGGGTCCTGGAGCGACAGCTCTCCTGAATGGGGCTCCGTGGACCTCGATGAACAGAAGCGCTTGTGTCACTCTGCTCTTGATGACGGGGAGTTCTGGATGTCATTTAAGGATTTCAAGACCCACTTTGACAAAGTGGAGATTTGCAACCTCACACCTGATGCCCTGGAGGAGGACACTCTCCACAGATGGGAGGTGACAATCCACCAAGGAAGCTGGGTTCGGGGCTCCACAGCAGGGGGCTGCCGGAACTTCCTGGATACATTTTGGACCAATCCACAGATACAGCTGTCCCTGACAGAGCAGGACGAGGAGCAGGAAGGATGTACTTTCCTTGTAGCTCTGATGCAGAAAGATCGGCGGAAACTGAAGAGGCGCGGTGCTGACATGCTGACCATAGGCTATGCTATCTACCAGAGCCCTGAGGAGCATGGACACCTGAGCAGAGACTTCTTCAGGTACCACGCTTCCCTGGCCAGAAGCAAGACCTTCATCAACCTGAGGGAAGTCTCTGACCGCTTCCGGCTGCCCCCGGGGGAGTACATCCTGATCCCCAGCACCTTCGAGCCCCATCAGGAGGCTGACTTTTGTCTGAGGATCTTTTCAGAGAAGAAGACCGTCACCAGGGACCTGGATGGAACCACAGACATCCACCTCCCCGAGCCTCTGCAGCCGACTCCCCCTGAGCAGGAGACAGAGGAGGAGCAGCAGTTCCGGGCCCTGTTCCAGGCCATCGCTGGTGAGGACATGGAGGTGACTGCAGAGGAGCTCGAATATGTTTTAAATACCGTGCTGCAAAAGAAAAAGGATCTCAAATTCAAGAAGCTAAGCCTGATCTCCTGCAAGAACATCATTTCTCTGATGGATACCAGAGGCAATGGGAAGCTGGACTTCAGTGAATTCCAGATGTTCTGGGACAAGCTGAAGCAGTGGATTAACCTGTTCCTCCAGTTTGATGTGGACAAGTCCGGCACTATGTCCTCCTATGAGCTTCGGACTGCACTGAAAGCCGCAGGCTTCCAGCTGAGCAGCCACCTCCTGCAGTTGGTTGTGCTCAGATACGCGGATGAGGAACTCCAGATGGACTTTGACGACTTCCTCAACTGCCTGGTGCGGCTGGAGAACGCGAGCAGGGTGTTCCAGGCCCTCAGTACGAAGACCAAGGACTTCATCTACCTCAACATAAATGAGTTCATCAATTTGACAATGAATATCTGA

Related Sequences

XP_004854731.1 Protein

Capn9 PREDICTED: calpain-9 isoform X1 [Heterocephalus glaber]

Length: 690 aa      View alignments
>XP_004854731.1
MPYLHPAPGPQTHLVPQDARATHSSGKSFEQLRQDCLQAGTLFEDTDFPACNASLFFSERPQVPFVWKRPGEIVEHPEFIRGGATRTDICQGELGDCWLLAAIASLTLNEKALARVVPQDQSFGPGYAGIFHFQFWQHSEWLDVVIDDRLPTFRDRLVFLHSADHCEFWSALLEKAYAKLNGSYEALKGGSTIEAMEDFTGGVAEIFHTREAPKDFYQILEKALRRGSLLGCSMDIRNAAESEARTPFGLIKGHAYTVTGIDQVNFRGQKTELIRVRNPWGQVEWNGSWSDSSPEWGSVDLDEQKRLCHSALDDGEFWMSFKDFKTHFDKVEICNLTPDALEEDTLHRWEVTIHQGSWVRGSTAGGCRNFLDTFWTNPQIQLSLTEQDEEQEGCTFLVALMQKDRRKLKRRGADMLTIGYAIYQSPEEHGHLSRDFFRYHASLARSKTFINLREVSDRFRLPPGEYILIPSTFEPHQEADFCLRIFSEKKTVTRDLDGTTDIHLPEPLQPTPPEQETEEEQQFRALFQAIAGEDMEVTAEELEYVLNTVLQKKKDLKFKKLSLISCKNIISLMDTRGNGKLDFSEFQMFWDKLKQWINLFLQFDVDKSGTMSSYELRTALKAAGFQLSSHLLQLVVLRYADEELQMDFDDFLNCLVRLENASRVFQALSTKTKDFIYLNINEFINLTMNI