Sequence details NCBI ID: XM_004854672.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ttc13
Gene Name tetratricopeptide repeat domain 13, transcript variant X5
Entrez Gene ID 101715011

Database interlinks

Part of NW_004624775.1 (Scaffold)

For more information consult the page for NW_004624775.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TTC13 ENSCPOG00000002678 (Guinea pig)

Gene Details

tetratricopeptide repeat domain 13

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002431, Guinea pig)

Protein Percentage 99.44%
CDS Percentage 95.95%
Ka/Ks Ratio 0.01971 (Ka = 0.0028, Ks = 0.1398)

TTC13 ENSG00000143643 (Human)

Gene Details

tetratricopeptide repeat domain 13

External Links

Gene Match (Ensembl Protein ID: ENSP00000355621, Human)

Protein Percentage 95.08%
CDS Percentage 87.71%
Ka/Ks Ratio 0.05013 (Ka = 0.0275, Ks = 0.5485)

Ttc13 ENSMUSG00000037300 (Mouse)

Gene Details

tetratricopeptide repeat domain 13

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000038484, Mouse)

Protein Percentage 94.68%
CDS Percentage 86.97%
Ka/Ks Ratio 0.0409 (Ka = 0.0271, Ks = 0.6625)

Ttc13 ENSRNOG00000018884 (Rat)

Gene Details

tetratricopeptide repeat domain 13 (Ttc13), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000025548, Rat)

Protein Percentage 95.44%
CDS Percentage 87.3%
Ka/Ks Ratio 0.03656 (Ka = 0.0231, Ks = 0.6319)

Genome Location

Sequence Coding sequence

Length: 2379 bp    Location: 18652625..18713577   Strand: +
Raw sequence   
>XM_004854672.1
ATGGCACCTGCCGGCCGCGGGCGTGGATGCCGGGGTGGCTTGGGTATTCGGGCGCTGCCGCCAGTTCTGCTGCTGGGGGCTCTGGCCTGCGCGCGCGCCACAGAGCACTACTCGCCGCTGTCCCTGCTCAAGCAGGAGCTACAACATCGGCACCAGCAGGAGGCCTCGGTGGGCGGCGGCTGCCCGCAGTCGGGGGACTGGACGGACCAGTACCCGGCAGAGTGCGGTGAGTCATCCTTTTTGAACTTCCACGAGTCAGACTGCGAACCCAAAGGATCACCACCCTGTGACTCCTTGCTTTCTCTCAACACTGAAAAGATTCTGAGCCAGGCCAAGTCTATCGCAGAACAAAAGAGATTTCCATTTGCCACTGATAATGACAGCACAAATGAAGAGTTAGCTATTGCTTATGTGTTGATTGGCAGTGGTCTGTATGATGAAGCCATAAGGCATTTTTCAACAATGCTTCAGATTCTGTCCCCTCTGGGGCGAATTAATGAAGCAGTGAATGATCTCACTAAAGCTATTCAGCTTCAGCCGTCTGCACGGCTGTACCGACACCGGGGGACCCTGCACTTCATATCTGAGGATTATGCGACAGCACATGAGGACTTCCAGCAGTCCTTAGAGCTGAACAGAAACCAGCCCACAGCCATGCTATACAAAGGCCTGACCTTCTTCCACAGAGGACTTCTCAAGGAAGCTATTGAATCCTTCAAAGAAGCTTTGAAGCAGAAAGTTGATTTTATTGATGCCTATAAAAGTCTGGGCCAGGCCTACAGAGAACTGGGCAATTTTGAAGCAGCCACTGAGAGCTTCCAGAAGGCACTACTGCTCAACCAGAACCATGTGCAGACCCTCCAGCTCCGGGGGATGATGCTGTATCACCATGGCAGCTTGCCGGAGGCCCTGAAGAACTTCAAGCGGTGCCTGCAGTTGGAACCATACAACGAGGTGTGCCAGTACATGAAAGGGCTCAGCCATGTTGCAATGGGACAGTTCTACGAAGGGATAAAAGCACAAACCAAAGTGATGCTCAATGACCCTCTCCCGGGCCAGAAGGCCAGCCCAGAGTACCTTAAGGTGAAATATCTCCGAGAATATTCTCGGTATCTGCATGCACACCTGGATACTACACTCACGGAGTATAATGTGGATGTGGATCTGCCAGGGAGCTTCAAGGATCACTGGGCCAAAAATCTGCCTTTCCTTATAGATGACTATGAGGAGCAGCCTGGCTTGCAGCCCCATATAAAGGATGTGTTACATCAGAACTTTGAGAGTTACAAGCCTGAGGTACAGGAGCTAATCTGTGTAGCTGATCGCTTGGGATCGCTGATGCAATATGAGACCCCTGGTTTCCTGCCAAACAAGAGAATACACAGAGCCATGGGTCTGGCAGCACTGGAAGTCATGCAAGCTGTCCAGCGCACATGGACCAACTCGAAAGTCCGCATGAATGGAAAAACCCGGCTGATGCAGTGGAGGGACATGTTTGACATCGCAGTGAAGTGGAGAAGGGTTGCTGACCCGGACCAGCCTGTGTTGTGGCTGGATCAGATGCCAGCACAGAGTCTCAGCAGAGGTTTCAACAACCACATCAACTTAATCAGGGGACAGGTGATTAACATGAGATATCTGGAATATTTTGAGAAAATACTTCATTTTATTAAAGATAGAATTCTTGTTTATCATGGAACTAATAACCCTAAAGGATTGTTAGAAGTCAGAGAAGCTCTGGAAAAGGTGCACAAAGTGGAAGACCTTCTTCCAATTATGAAGTTTAATACCAAAACGAAGGACGGGTTCACCGTGAACACGAAAGTTCCCAGCCTCAAAGACCAAGGGAAGGAGTACGATGGGTTCACGATCACCATCACAGGGGACAAAGTTGGAAATATCCTGTTTTCTGTGGAAACTCAAACCACAGAAGAAAGGACACAATTATATCATGCTGAAATAGATGCACTTTATAAAGATCTGACAGCAAAAGGAAAAGTACTGATTCTTTCATCAGAATTTGGGGAGGCTGATGCTGTCTGCAATTTAATCTTGTCCTTGGTTTATTACTTCTATAATTTAATGCCCCTCTCTCGAGGATCTAGTGTCATCGCCTACTCTGTCATTGTGGGGGCGCTGATGGCCAGTGGGAAAGAAGTAGCAGGGAAAATCCCCAAGGGCAAGTTAGTCGATTTTGAAGCTATGACAGCCCCTGGTTCAGAGGCCTTCAGCAAAATAGCTAAGAGCTGGATGAACTTGAAAAGCATCTCCCCCTCATACAAGACCCTCCCAGCAGTGTCAGAGACATTTCCTACGTTAAGGTCAATGATTGAAGTGCTAAACACGGACTCCTCGCCACGATGTCTCAAGAAACTCTAG

Related Sequences

XP_004854729.1 Protein

Ttc13 PREDICTED: tetratricopeptide repeat protein 13 isoform X5 [Heterocephalus glaber]

Length: 792 aa      View alignments
>XP_004854729.1
MAPAGRGRGCRGGLGIRALPPVLLLGALACARATEHYSPLSLLKQELQHRHQQEASVGGGCPQSGDWTDQYPAECGESSFLNFHESDCEPKGSPPCDSLLSLNTEKILSQAKSIAEQKRFPFATDNDSTNEELAIAYVLIGSGLYDEAIRHFSTMLQILSPLGRINEAVNDLTKAIQLQPSARLYRHRGTLHFISEDYATAHEDFQQSLELNRNQPTAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLPEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLHAHLDTTLTEYNVDVDLPGSFKDHWAKNLPFLIDDYEEQPGLQPHIKDVLHQNFESYKPEVQELICVADRLGSLMQYETPGFLPNKRIHRAMGLAALEVMQAVQRTWTNSKVRMNGKTRLMQWRDMFDIAVKWRRVADPDQPVLWLDQMPAQSLSRGFNNHINLIRGQVINMRYLEYFEKILHFIKDRILVYHGTNNPKGLLEVREALEKVHKVEDLLPIMKFNTKTKDGFTVNTKVPSLKDQGKEYDGFTITITGDKVGNILFSVETQTTEERTQLYHAEIDALYKDLTAKGKVLILSSEFGEADAVCNLILSLVYYFYNLMPLSRGSSVIAYSVIVGALMASGKEVAGKIPKGKLVDFEAMTAPGSEAFSKIAKSWMNLKSISPSYKTLPAVSETFPTLRSMIEVLNTDSSPRCLKKL