Sequence details NCBI ID: XM_004854578.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Idi1
Gene Name isopentenyl-diphosphate delta isomerase 1, transcript variant X1
Entrez Gene ID 101712767

Database interlinks

Part of NW_004624775.1 (Scaffold)

For more information consult the page for NW_004624775.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

IDI1 ENSCPOG00000002581 (Guinea pig)

Gene Details

isopentenyl-diphosphate delta isomerase 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002348, Guinea pig)

Protein Percentage 91.21%
CDS Percentage 91.07%
Ka/Ks Ratio 0.13763 (Ka = 0.0444, Ks = 0.3227)

IDI1 ENSG00000067064 (Human)

Gene Details

isopentenyl-diphosphate delta isomerase 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000370748, Human)

Protein Percentage 80.43%
CDS Percentage 85.17%
Ka/Ks Ratio 0.235 (Ka = 0.1028, Ks = 0.4373)

Idi1 ENSMUSG00000058258 (Mouse)

Gene Details

isopentenyl-diphosphate delta isomerase

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000132780, Mouse)

Protein Percentage 76.51%
CDS Percentage 81.14%
Ka/Ks Ratio 0.25401 (Ka = 0.1442, Ks = 0.5678)

Idi1 ENSRNOG00000016690 (Rat)

Gene Details

isopentenyl-diphosphate delta isomerase 1 (Idi1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000022389, Rat)

Protein Percentage 85.02%
CDS Percentage 85.9%
Ka/Ks Ratio 0.12897 (Ka = 0.077, Ks = 0.5972)

Genome Location

Sequence Coding sequence

Length: 861 bp    Location: 9874168..9878787   Strand: +
Raw sequence   
>XM_004854578.1
ATGATTGGCCAGAGCCTATGGTGCGGGCAAGCGCTGACACGGACGATTGGACGCGCTGTCTGGAGGCGGGGCCAGAGGGAGGGACGCGTTGCGCGTTTTGCCCAAATAGAGCCCGCGCCTTATACTGGCAGTGTCTGCGGCTTAAGTGTTCTAGGGCACTTAAGACATTTTGTAACGATGCCTGAAGTAAATATCAACCATCTCGATAAGCAACAGGTTCAACTCCTGGCAGAGATGTGTATTCTTATTGATGAAAATGACAATAAAATTGGAGCTGACACCAAGAAGAATTGTCACCTAAATGAAAACATCGAGAAAGGATTATTGCATCGAGCGTTTAGTGTCTTCTTGTTTAACACTGAGAATAAGCTGCTGCTACAGCAGAGATCAGATGCTAAAATTACCTTTCCAGGTTGTTTTACCAACACTTGTTGTAGTCATCCATTGAATAATCCAGGTGAGCTTGAAGAAAATGAGGCCATTGGTGTGAGAAGAGCAGCACAGAGGCGTTTAAAAGCTGAATTAGGAATTCCCTTAGAAGAGGTTTCACCAGCAGAAATTGATTATATAACACGAATTCACTACAAGGCACAGTCTGACAGTATCTGGGGTGAAAATGAAATCGATTACATTTTGTTTGTGAGGAAGAATGTAACTTTGAATCCAGATCCCAACGAGATTAAAAGCTATTGTTATGTGTCAAAGGAAGAACTAAGAGAACTTATGAGAAAAGCAGCCAGAGGCGATGTTAAGCTAACTCCATGGTTTAAAATTATTGTAGAGACTTTTCTCTTTAAATGGTGGGATAACTTAAATCATTTGAGTCAGTTTATTGACCATGAGAAAATACATAGAATGTGA

Related Sequences

XP_004854635.1 Protein

Idi1 PREDICTED: isopentenyl-diphosphate Delta-isomerase 1 isoform X1 [Heterocephalus glaber]

Length: 286 aa      View alignments
>XP_004854635.1
MIGQSLWCGQALTRTIGRAVWRRGQREGRVARFAQIEPAPYTGSVCGLSVLGHLRHFVTMPEVNINHLDKQQVQLLAEMCILIDENDNKIGADTKKNCHLNENIEKGLLHRAFSVFLFNTENKLLLQQRSDAKITFPGCFTNTCCSHPLNNPGELEENEAIGVRRAAQRRLKAELGIPLEEVSPAEIDYITRIHYKAQSDSIWGENEIDYILFVRKNVTLNPDPNEIKSYCYVSKEELRELMRKAARGDVKLTPWFKIIVETFLFKWWDNLNHLSQFIDHEKIHRM