Details from NCBI annotation

Gene Symbol Upf2
Gene Name UPF2 regulator of nonsense transcripts homolog (yeast)
Entrez Gene ID 101707612

Database interlinks

Part of NW_004624775.1 (Scaffold)

For more information consult the page for NW_004624775.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

UPF2 ENSG00000151461 (Human)

Gene Details

UPF2 regulator of nonsense transcripts homolog (yeast)

External Links

Gene Match (Ensembl Protein ID: ENSP00000348708, Human)

Protein Percentage 97.16%
CDS Percentage 94.4%
Ka/Ks Ratio 0.05197 (Ka = 0.0125, Ks = 0.2406)

Upf2 ENSMUSG00000043241 (Mouse)

Gene Details

UPF2 regulator of nonsense transcripts homolog (yeast)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000058375, Mouse)

Protein Percentage 97.16%
CDS Percentage 91.94%
Ka/Ks Ratio 0.03252 (Ka = 0.0127, Ks = 0.39)

Upf2 ENSRNOG00000023593 (Rat)

Gene Details

UPF2 regulator of nonsense transcripts homolog (yeast)

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000054878, Rat)

Protein Percentage 91.73%
CDS Percentage 87.71%
Ka/Ks Ratio 0.103 (Ka = 0.0555, Ks = 0.5392)

Genome Location

Sequence Coding sequence

Length: 3807 bp    Location: 7249332..7149055   Strand: -
>XM_004854567.1
ATGCCAGCTGAGCGTAAAAAGTCAGCAAGTATGGAAGAAAAAGAATCTTTGCTAAACAACAAAGAGAAAGACTGCAGTGAAAAGCGGCCAGTGAACAGCAAGGAAAAACCAAAAGACGATCTCAAGATCACTGCCAAGAAAGAGGTCAGTAAGGTCCCCGAAGAGAAAAAGAAGAAACTAGAAGAAGATAAGAAGAAAAAGGAAGACAAAGAACGCAAGAAAAAAGAAGAAGAAAAGGTGAAAGCAGAGGAAGAATTAAAGAAAAAAGAAGAAGAAAAAAAGAAACATGAAGAGGAAGAGAGAAAAAAGCAGGAAGAGCAAGCAAAACGTCAGCAAGAAGAAGAAGCTGCTCAGTTAAAAGAGAGGGAAGAATCCCTTCAGCTTCATCAGGAAGCTTGGGAACGACATCAGTTAAGAAAGGAGCTTCGTAGCAAAAACCAAAATGCTCCAGACAACCGACCAGAGGAAAATTTCTTTAGCCGCCTGGACTCAAGTTTGAAGAAAAATACTGCTTTTGTCAAGAAACTAAAAACTATTACAGAACAACAGAGAGACTCCTTGTCCCATGATTTTAATGGCCTAAATTTAAGCAAATACATTGCAGAGGCTGTAGCTTCCATTGTAGAAGCCAAACTAAAAATCTCTGATGTGAACTGTGCTGTGCACCTGTGTTCTCTCTTTCACCAGCGCTATGCTGACTTTGCCCCCTCACTTCTTCAGGTCTGGAAAAAACATTTTGAAGCAAGGAAAGAGGAGAAAACTCCTAACATTACCAAGCTAAGAACTGATTTGCGTTTCATTGCAGAATTGACAATAGTTGGGATTTTCACTGACAAGGAAGGTCTTTCCTTAATCTATGAACAGCTGAAAAATATTATTAATGCTGATCGAGAATCCCACACTCATGTTTCTGTGGTGATTAGTTTCTGTCGCCATTGTGGAGATGATATTGCTGGACTTATACCAAGGAGAGTAAAGAGTGCTGCAGAGAAGTTTAATTTGAGTTTTCCTCCTAGTGAGATAATTAGTCCAGAGAAACAACAACCTTTCCAGAATCTTTTGAAAGAGTACTTTACGTCTTTGACCAAACACCTGAAAAGGGACCACAGGGAGCTCCAGAATACTGAGAGACAAAACAGGCGTATTCTACATTCTAAAGGGGAACTAAGTGAAGATAGACATAAACAATATGAAGAATTTGCTATGTCTTATCAGAAGTTGCTGGCAAATTCTCAATCCTTAGCAGACCTTTTGGATGAAAATATGCCAGATCTTCCTCAGGATAAGCCAACACCAGAAGAGCATGGGCCTGGGATTGATATATTCACACCTGGTAAACCTGGAGATTATGACTTGGAAGGTGGTATATGGGAAGATGAAGATGCTCGGAATTTTTATGAGAACCTTATTGATTTGAAAGCTTTTGTTCCAGCCATCTTGTTTAAAGATAATGAAAAAAGTTGTCAGAACAAAGAGTCTAACAAAGATGATTCCAAAGAGGCAAAGGAACCTAAGGATAATAAGGAGGTATCAAATCCTGATGATTTGGAACTTGAGTTGGAAAACCTAGAAATTAACGATGACACTTTGGAGTTAGAAGGTGGGGATGAAGCTGAAGATCTTACAAAGAAACTTCTTGATGAACAAGAACAAGAGGATGAAGAAGCCAGCACTGGATCTCATCTCAAGCTCATAGTAGATGCTTTCCTTCAGCAGTTGCCCAACTGTGTCAACCGAGATCTGATAGACAAGGCAGCAATGGATTTTTGCATGAACATGAACACAAAAGCAAACAGGAAGAAGTTGGTACGAGCACTCTTCATAGTTCCTAGACAAAGGTTGGATTTGCTACCATTTTATGCAAGATTGGTTGCTACATTGCATCCCTGCATGTCTGATGTAGCAGAGGATCTTTGTTCCATGCTGAGGGGGGATTTCAGATTTCATGTGCGAAAAAAGGACCAGATCAATATTGAAACAAAGAACAAAACTGTTCGTTTTATTGGAGAACTAACTAAGTTTAAGATGTTTACAAAAAATGATACGCTCCATTGTTTGAAGATGCTTCTGTCAGACTTTTCTCATCATCATATTGAAATGGCTTGTACTCTACTGGAGACATGTGGACGGTTTCTTTTTAGATCTCCAGAATCACACCTGAGGACCAGTGTACTTTTGGAGCAAATGATGAGAAAGAAACAAGCAATGCATCTTGATGCAAGATACGTGACAATGGTGGAAAATGCTTATTACTACTGCAACCCACCTCCAGCTGAAAAGACAGTGAAAAAGAAACGTCCTCCCCTCCAGGAATATGTCCGGAAACTTTTGTATAAGGATCTCTCTAAGGTCACTACTGAAAAGGTTTTGAGACAGATGCGAAAGTTGCCCTGGCAGGACCAAGAAGTGAAAGACTATGTTATTTGTTGTATGATAAACATCTGGAATGTGAAATACAATAGTATTCATTGTGTAGCCAACCTTTTAGCAGGACTAGTGCTCTACCAAGAAGATGTTGGTATCCATGTTGTAGATGGAGTTTTAGAAGATATTCGATTGGGAATGGAGGTCAATCAACCTAAATTTAATCAGAGGCGTATCAGCAGTGCTAAGTTCTTAGGGGAACTTTATAATTACCGAATGGTGGAATCAGCTGTTATTTTCAGAACTCTCTATTCATTTACTTCATTCGGTGTTAACCCTGATGGCTCTCCAAGTTCACTGGACCCTCCTGAGCATCTTTTCAGAATTAGACTAGTATGCACTATTTTGGATACCTGTGGCCAGTACTTTGACAGAGGTTCCAGTAAACGAAAACTTGATTGCTTCCTTGTATATTTTCAGCGTTATGTTTGGTGGAAGAAAAGTTTGGAGGTTTGGACAAAAGACCATCCATTTCCTATTGATATAGATTACATGATCAGTGATACACTAGAACTGCTAAGACCAAAGATCAAACTCTGTAATTCTCTGGATGAATCCATCAGGCAGGTACACGAACTGGAACAAGAATACTTAATAAAACTAGGCCTAGTAAATGACAAAGACTCAAAAGATTCTGTGACAGAAGGAGAAAATCTTGAAGAAGATGAAGAAGAAGAAGAAGGGGGAGCTGAAACAGAAGAACAGTCTGGAAATGAAAGTGAAGTAAATGAGCCAGAAGAAGAGGAGGTTTCTGATAATGACGATGATGAAGGAGAAGAAGAGGAAGAAGAGAATACAGATTACCTTACAGATTCCAACAAGGAGAATGAAACTGATGAAGAGAATACTGAGGTAATGATTAAAGGAGGTGGACTAAAGCATGTGCCTTGTGTAGAAGATGAGGACTTCATTCAAGCTCTGGATAAAATGATGCTAGAAAATCTTCAGCAACGAAGTGGTGAATCTGTTAAAGTGCACCAGCTTGATGTTGCTATTCCTTTGCATCTCAAAAGCCAGCTGAGGAAAGGGCCTCCTCTTGGTGGTGGGGAAGGAGAGGCAGAGTCTGCAGACACGATGCCATTTGTCATGCTAACAAGAAAAGGAAATAAACAGCAGTTTAAAATCCTCAATGTGCCCATGTCATCCCAACTTGCTGCGAATCATTGGAACCAGCAACAGGCAGAACAAGAAGAGAGGATGAGAATGAAAAAGCTCACACTAGATATCAATGAACGGCAAGAACAAGAAGATTATCAAGAAATGCTGCAGTCTCTTGCCCAGCGCCCAGCTCCAGCAAACACCAATCGTGAGCGGCGGCCTCGTTACCAACATCCAAAGGGAGCACCTAATGCAGATCTAATCTTTAAGACTGGTGGGAGGTAA

Related Sequences

XP_004854624.1 Protein

Upf2 PREDICTED: regulator of nonsense transcripts 2 [Heterocephalus glaber]

Length: 1268 aa     
>XP_004854624.1
MPAERKKSASMEEKESLLNNKEKDCSEKRPVNSKEKPKDDLKITAKKEVSKVPEEKKKKLEEDKKKKEDKERKKKEEEKVKAEEELKKKEEEKKKHEEEERKKQEEQAKRQQEEEAAQLKEREESLQLHQEAWERHQLRKELRSKNQNAPDNRPEENFFSRLDSSLKKNTAFVKKLKTITEQQRDSLSHDFNGLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSLLQVWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRESHTHVSVVISFCRHCGDDIAGLIPRRVKSAAEKFNLSFPPSEIISPEKQQPFQNLLKEYFTSLTKHLKRDHRELQNTERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLLDENMPDLPQDKPTPEEHGPGIDIFTPGKPGDYDLEGGIWEDEDARNFYENLIDLKAFVPAILFKDNEKSCQNKESNKDDSKEAKEPKDNKEVSNPDDLELELENLEINDDTLELEGGDEAEDLTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANRKKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIETKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESHLRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYKDLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDVGIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFGVNPDGSPSSLDPPEHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLEVWTKDHPFPIDIDYMISDTLELLRPKIKLCNSLDESIRQVHELEQEYLIKLGLVNDKDSKDSVTEGENLEEDEEEEEGGAETEEQSGNESEVNEPEEEEVSDNDDDEGEEEEEENTDYLTDSNKENETDEENTEVMIKGGGLKHVPCVEDEDFIQALDKMMLENLQQRSGESVKVHQLDVAIPLHLKSQLRKGPPLGGGEGEAESADTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWNQQQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPNADLIFKTGGR