Details from NCBI annotation

Gene Symbol Usp6nl
Gene Name USP6 N-terminal like, transcript variant X2
Entrez Gene ID 101704588

Database interlinks

Part of NW_004624775.1 (Scaffold)

For more information consult the page for NW_004624775.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

USP6NL ENSCPOG00000006725 (Guinea pig)

Gene Details

USP6 N-terminal like

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006060, Guinea pig)

Protein Percentage 93.96%
CDS Percentage 93.88%
Ka/Ks Ratio 0.15216 (Ka = 0.0289, Ks = 0.1899)

USP6NL ENSG00000148429 (Human)

Gene Details

USP6 N-terminal like

External Links

Gene Match (Ensembl Protein ID: ENSP00000277575, Human)

Protein Percentage 85.99%
CDS Percentage 85.31%
Ka/Ks Ratio 0.15616 (Ka = 0.0794, Ks = 0.5086)

Usp6nl ENSMUSG00000039046 (Mouse)

Gene Details

USP6 N-terminal like

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000043178, Mouse)

Protein Percentage 83.31%
CDS Percentage 83.03%
Ka/Ks Ratio 0.15206 (Ka = 0.0953, Ks = 0.6268)

Usp6nl ENSRNOG00000017644 (Rat)

Gene Details

USP6 N-terminal like (Usp6nl), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000046740, Rat)

Protein Percentage 84.5%
CDS Percentage 82.37%
Ka/Ks Ratio 0.12779 (Ka = 0.09, Ks = 0.704)

Genome Location

Sequence Coding sequence

Length: 2541 bp    Location: 6746978..6669458   Strand: -
>XM_004854562.1
ATGGGGACTGAAGCAGCTCTCAGTTCCCAAGGCCAGACTGATTATCCAACAAAAGATTCGGACCAGGATGTAGCCCTCAAACTTGCCCAAGAACGAGCTGAAATTGTTGCTAAATATGACAGAGGACGAGAAGGTGCAGAGATTGAACCTTGGGAGGATGCTGATTATCTTGTTTACAAAGTCACGGATAGATTTGGCTTTTTGCATGAGGAGGAGCTCCCCTATCATAATGCAGCTATGGAACGGCAAAAGCACTTGGAAATTGAAAGAACTACCAAATGGCTGAAAATGCTAAAAGGATGGGAAAAATACAAGAACACTGAAAAGTTTCACAGAAGAATTTACAAAGGAATCCCCCTCCAGCTCCGGGGTGAGGTCTGGGCTCTCCTTCTTGAGATCCCTAAAATGAAAGAAGAAACACGAGACCTTTATAGTAAATTAAAACACAGAGCACGGGGCTGTTCACCTGATATCAGACAGATAGACCTTGATGTCAACCGTACATTTAGGGACCATATTATGTTTAGAGACAGATACGGTGTTAAGCAACAGTCTTTATTCCATGTTCTTGCTGCATATTCTATATATAATACGGAAGTTGGGTACTGTCAGGGAATGAGCCAAATCACAGCTTTGCTTCTCATGTACATGAACGAGGAAGACGCTTTTTGGGCCCTCGTCAAACTCTTCTCAGGCCCCAAACATGCCATGCATGGCTTTTTTGTCCAAGGTTTTCCTAAACTCTTGCGGTTTCAAGAACATCATGAAAAAATACTGAATAAATTTCTGTCTAAACTTAAGCAACACTTGGATTCTCAAGAAATCTATACAAGCTTCTATACAATGAAGTGGTTTTTTCAATGTTTCCTTGATCGTACTCCCTTTACACTAAACCTCAGAATATGGGATATCTACATCTTTGAAGGAGAACGAGTTCTTACTGCTATGTCTTACACAATTTTAAAATTACACAAAAAACATCTAATGAAATTGTCTATGGAAGAACTTGTAGAATTTCTTCAGGAGACTCTAGCAAAGGACTTTTTCTTTGAAGATGATTTTGTAATAGAGCAACTTCAGATTTCTATGGCAGAACTAAAGCGGGCAAAGTTAGACCTCCCAGAACCTGGTAAAGAGGATGAATATCCAAAGAAACCATTGGGGCAGCTTCCACCTGAATGTCTTTCTGGTGGAATTAACCACATTAGCAATGGGCAAAGAAGTGTTGGCAGGCCCAGTCCCCATATAAACAGCAGAAGAGAAAGTGGCTCATCACCTCACAGAAAGCATGAGCACTCCCCCCACCATCAGAATAAAACTGGTACACCAGAACGAGTGAGGCAGCTCAGACAGAAATCAGTGGATGAAGATAGTAAAAATCTTAAAGATGAGAATTTTCAAAGAAAACTTTCTTCAGGTCCACAAGACAATTCCAGGCACTATAACCATGCAGCTGCTAACCAAAATAGCAATGCTACTTCAAATATCAAGAAGGAATTTATGCCCAAATGGAATAAACCATCAGATAGTTCAGCTGTTGAAAGAACTGCCAAATATGTCATCGAAGGCAAAAGCAGATCGGTCCACCCCATACTTACAGTCACCACTCCAAGTTCTGCTGATGCTCGGATAGCAAATGCAAGGCAGAAGATGAAGGTCTTGGATGGTGATGATGGGAAGCGGGGCTCTAATGCATCACAGTATGATAATGTTCCTGGGAGTGAAAATGAAAACGGAGCTTCTGTTGAAGAGGCACTAGAGAGGGCTTACTCTCAAAGTCCAAGGAATGTCATTTACTCCAACAGTCCAAGAAAGCACGCTGAGCCAGGTTGTAGTCCACCAAAAGTACTCAACAAGTTTACCTTTAAAGTACAGCCTCCAAGCTATGGAAAATATCCATCTCAGTTAGAAGAAGATCAAGGGACCATGTATCCTCCATCCTACAGCAATCCCCCTGTTTACCATGGAAATTCTCCGAAACACATCCCCACTGCTAACAGCTTTGTGTCTCCGCAGATTAGTCCTGGAACTCAAATGAATCCTTCCAGGAGACCTTATGTTTCTACTCTTTCAGTTGATACTTCTCCAGAGAAACCTTATAGCGGTCTAGCCCCTCTTGTACTACCATCTAGTCGAATAGAAGTCCTTCCTGTTGATATTGGTGCTGGGGGATACTCGGGCCATTCAGGGTCACCAAAGAATGGTAAATTTATCATTCCTCCAGTAGATTATTTGCCAGATAACAGAAAATGGTCAGAAGTTGGTTATACATGCAGACCAGAGATGCATGGACAATCATGGACTCGAGATACTAACCGTAGCCACTTAAGCAATTTACCAAAATATTCAGCCTTTCAACATGTGCCCTTTCAGGACCATAACCTCCCAGCAGTTTCAGTTGATAGCCCAGTGCGGTATAAAACTTCACCAGCTATAGATGATGCCAGTCCAGCTGGGTATCAATATGCAGGGCCCTTGCCTCCAGCATATCACTATAGAAATCGGGAGGGGCTTTCTGTTCAAGAGTCAGTATTGCTGTGA

Related Sequences

XP_004854619.1 Protein

Usp6nl PREDICTED: USP6 N-terminal-like protein isoform X2 [Heterocephalus glaber]

Length: 846 aa      View alignments
>XP_004854619.1
MGTEAALSSQGQTDYPTKDSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDADYLVYKVTDRFGFLHEEELPYHNAAMERQKHLEIERTTKWLKMLKGWEKYKNTEKFHRRIYKGIPLQLRGEVWALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIMFRDRYGVKQQSLFHVLAAYSIYNTEVGYCQGMSQITALLLMYMNEEDAFWALVKLFSGPKHAMHGFFVQGFPKLLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTPFTLNLRIWDIYIFEGERVLTAMSYTILKLHKKHLMKLSMEELVEFLQETLAKDFFFEDDFVIEQLQISMAELKRAKLDLPEPGKEDEYPKKPLGQLPPECLSGGINHISNGQRSVGRPSPHINSRRESGSSPHRKHEHSPHHQNKTGTPERVRQLRQKSVDEDSKNLKDENFQRKLSSGPQDNSRHYNHAAANQNSNATSNIKKEFMPKWNKPSDSSAVERTAKYVIEGKSRSVHPILTVTTPSSADARIANARQKMKVLDGDDGKRGSNASQYDNVPGSENENGASVEEALERAYSQSPRNVIYSNSPRKHAEPGCSPPKVLNKFTFKVQPPSYGKYPSQLEEDQGTMYPPSYSNPPVYHGNSPKHIPTANSFVSPQISPGTQMNPSRRPYVSTLSVDTSPEKPYSGLAPLVLPSSRIEVLPVDIGAGGYSGHSGSPKNGKFIIPPVDYLPDNRKWSEVGYTCRPEMHGQSWTRDTNRSHLSNLPKYSAFQHVPFQDHNLPAVSVDSPVRYKTSPAIDDASPAGYQYAGPLPPAYHYRNREGLSVQESVLL