Sequence details NCBI ID: XM_004854540.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Atp5c1
Gene Name ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1, transcript variant X3
Entrez Gene ID 101696648

Database interlinks

Part of NW_004624775.1 (Scaffold)

For more information consult the page for NW_004624775.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ATP5C1 ENSCPOG00000010523 (Guinea pig)

Gene Details

ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009450, Guinea pig)

Protein Percentage 96.4%
CDS Percentage 94.72%
Ka/Ks Ratio 0.11273 (Ka = 0.0178, Ks = 0.158)

ATP5C1 ENSG00000165629 (Human)

Gene Details

ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000349142, Human)

Protein Percentage 94.61%
CDS Percentage 90.12%
Ka/Ks Ratio 0.07315 (Ka = 0.0278, Ks = 0.3798)

Atp5c1 ENSMUSG00000025781 (Mouse)

Gene Details

ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000110547, Mouse)

Protein Percentage 91.58%
CDS Percentage 87.32%
Ka/Ks Ratio 0.08063 (Ka = 0.0423, Ks = 0.5244)

Genome Location

Sequence Coding sequence

Length: 894 bp    Location: 2745595..2761704   Strand: +
Raw sequence   
>XM_004854540.1
ATGTTCTCTCGGGCGAACGTCGTTGGGGTGTCGGCCTGGGCCTTGCAGCCTCAATGGATCCAAGTCCGAAATATGGCAACTTTGAAAGATATTACCAGGCGACTAAAGTCAATCAAAAACATCCAGAAAATTACCAAGTCTATGAAAATGGTAGCAGCAGCAAAATATGCCCGAGCTGAGAGGGAGCTGAAACCGGCTCGGATATATGGAGTAGGATCTTTGGCTCTGTATGAAAAAGCTGATATTAAGGTACCTGAAGACAAGAAGAAACACCTCCTCATCGGTGTGTCCTCAGATCGAGGGCTTTGTGGTGCGATTCATTCCTCAGTCGCTAAACAGATGAAAAGTGAGGTGGTGACACTCACAGCAGCTGGAAAGGAGGTCATGCTCGTTGGAATTGGTGATAAAATCAGGGGCATACTTTCTAGGACTCATTCTGACCAATTTCTGGTGACATTCAAGGACGTGGGAAGAAAGCCCCCTACTTTTGGAGATGCATCCATCGTTGCTCTTGAATTATTAAATTCTGGATATGAGTTTGATGAAGGCTCTATCATCTTTAATCGATTCAGGTCTGTTATCTCCTATAAGACAGAAGAAAAACCCATCTTTTCTCTTAATACTATTGCAAGTGCTGAAAGCATGAGCATCTATGATGATATTGACGCTGATGTGTTGCAAAATTACCAAGAGTACAATCTGGCCAACATCATCTACTACTCCCTGAAGGAATCCACCACCAGCGAGCAGAGTGCCAGGATGACAGCAATGGACAACGCCAGCAAGAACGCTTCTGAGATGATTGATAAGTTGACTTTGACATTCAACCGCACTCGACAAGCTGTCATCACCAAAGAGTTGATTGAGATCATCTCTGGTGCGGCAGCTCTGTAA

Related Sequences

XP_004854597.1 Protein

Atp5c1 PREDICTED: ATP synthase subunit gamma, mitochondrial isoform X3 [Heterocephalus glaber]

Length: 297 aa      View alignments
>XP_004854597.1
MFSRANVVGVSAWALQPQWIQVRNMATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARIYGVGSLALYEKADIKVPEDKKKHLLIGVSSDRGLCGAIHSSVAKQMKSEVVTLTAAGKEVMLVGIGDKIRGILSRTHSDQFLVTFKDVGRKPPTFGDASIVALELLNSGYEFDEGSIIFNRFRSVISYKTEEKPIFSLNTIASAESMSIYDDIDADVLQNYQEYNLANIIYYSLKESTTSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAAL