Details from NCBI annotation

Gene Symbol Prdm6
Gene Name PR domain containing 6
Entrez Gene ID 101720211

Database interlinks

Part of NW_004624774.1 (Scaffold)

For more information consult the page for NW_004624774.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PRDM6 ENSCPOG00000004258 (Guinea pig)

Gene Details

PR domain containing 6

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003841, Guinea pig)

Protein Percentage 86.55%
CDS Percentage 87.65%
Ka/Ks Ratio 0.20289 (Ka = 0.068, Ks = 0.3352)

PRDM6 ENSG00000061455 (Human)

Gene Details

PR domain containing 6

External Links

Gene Match (Ensembl Protein ID: ENSP00000384725, Human)

Protein Percentage 95.33%
CDS Percentage 92.27%
Ka/Ks Ratio 0.0567 (Ka = 0.0205, Ks = 0.362)

Prdm6 ENSMUSG00000069378 (Mouse)

Gene Details

PR domain containing 6

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000089513, Mouse)

Protein Percentage 93.97%
CDS Percentage 88.51%
Ka/Ks Ratio 0.04466 (Ka = 0.0288, Ks = 0.6445)

Prdm6 ENSRNOG00000030486 (Rat)

Gene Details

Protein Prdm6

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000041369, Rat)

Protein Percentage 94.3%
CDS Percentage 89.69%
Ka/Ks Ratio 0.04918 (Ka = 0.0267, Ks = 0.5423)

Genome Location

Sequence Coding sequence

Length: 1752 bp    Location: 18941512..18840122   Strand: -
>XM_004854480.1
ATGCTGAAGCCGGGAGAGCCCGGCGGCTCGGCCTTCCTCAAAGTGGACCCAGCCTACCTGCAGCACTGGCAGCAGCTCTTCCCCCACGGTGGCGGCGGCGGCGGCGGCGGCGGGCCGCTCAAGGGCGGCGGCGCCGCAGGTCCCCTGGGCGCACCCCAGCCTTTGCAGCCGCCGCCGCCCCCGGAGCGCGCCGAGCCCCCGCCAGACAGCCTGCGCCCGCGGCCCGCTTCGCTCTCCGCTGCCGCGCCCGCCCCGGCCTCCGCCGCCGCCGCCACCTCGTCCGCGTCCTCCTGCGCCGCCGCCGCCCTAGCGGGGCTCTCGGCCCTGCCCGTGGCGCAGCTGCCGGTGTTCGCGCCTCTGGCCGCCGAGCCGCTGCCTCCGAAGGACCTGTGCCTGGGCGCTGCCCCGGGGCTCGGGCCCGCCAAGTGCGGCGGCGGCGACGGCCGGGGCGCCCCGCGCTTCCGCTGCAGCGCCGAGGAGCTGGACTATTACCTGTACGGCCAGCAGCGCATGGAGATCATCCCGCTGAACCAGCACACCAGCGACCCCAACAACCGTTGTGACATGTGCGCCGACAACCGCAACGGCGAGTGCCCCATGCATGGCCCGCTGCACTCGCTGCGCCGGCTCGTGGGCACCAGCAGCGCGGCGGCCGCCGCACCCCCGCCAGAGCTGCCGGAGTGGCTGCGGGACCTGCCCCGCGAGGTGTGCCTGTGCACCAGCACCGTGCCGGGCCTTGCCTACGGCATCTGCGCGGCTCAGCGGATCCAGCAGGGCACCTGGATCGGGCCCTTCCAGGGCGTGCTGCTGCCCCCGGAGAAGGTGCAGGCGGGCGCCGTGAGGAACACGCAGCACCTCTGGGAGATATATGATCAAGATGGGACACTACAGCACTTTATTGATGGTGGGGAACCTAGTAAGTCGAGCTGGATGAGGTATATCCGATGTGCAAGGCACTGCGGAGAACAGAATCTAACAGTAGTTCAGTACAGGTCGAATATATTCTACCGAGCCTGTATAGATATCCCCAGGGGCACCGAGCTTCTGGTGTGGTACAATGACAGCTATACGTCTTTCTTTGGGATCCCCTTACAATGCATTGCCCAGGATGAAAACTTAAATGTCCCTTCAACGGTCGTGGAAGCCATGTGCCGGCAGGATGCCCTGCAGCCCTTCAACAAGAGCAGCAAACTCACCCCGGCCACCCCGCAGCGCTCCATCGTTTTCCCACAGACTCCGTGCAACAGAAACTTCTCTCTCTTGGATAAGTCTGGGCCCATTGAATCGGGATTTAACCAAATCAACGTGAAAAACCAGCGAGTTCTTGCAAGCCCAACTTCCACAAGCCAGCTGCACTCGGAGTTCAGTGACTGGCACCTCTGGAAATGCGGGCAGTGCTTTAAGACTTTCACCCAGAGGATCCTGCTGCAGATGCACGTGTGCACGCAGAACCCCGACAGACCCTACCAGTGCGGCCACTGCTCCCAGTCCTTTTCCCAGCCTTCGGAACTGAGGAATCATGTGGTCACTCACTCCAGTGACCGGCCTTTCAAGTGTGGCTACTGTGGTCGTGCCTTTGCTGGGGCCACCACCCTCAACAACCACATCCGAACCCACACTGGAGAGAAGCCCTTCAAGTGCGAGAGGTGTGAGAGGAGCTTCACGCAGGCCACCCAGCTGAGCCGACACCAGCGGATGCCCAATGAGTGCAAGCCAATAACCGAGAGCCCAGAATCAATCGAAGTGGATTAA

Related Sequences

XP_004854537.1 Protein

Prdm6 PREDICTED: putative histone-lysine N-methyltransferase PRDM6 [Heterocephalus glaber]

Length: 583 aa      View alignments
>XP_004854537.1
MLKPGEPGGSAFLKVDPAYLQHWQQLFPHGGGGGGGGGPLKGGGAAGPLGAPQPLQPPPPPERAEPPPDSLRPRPASLSAAAPAPASAAAATSSASSCAAAALAGLSALPVAQLPVFAPLAAEPLPPKDLCLGAAPGLGPAKCGGGDGRGAPRFRCSAEELDYYLYGQQRMEIIPLNQHTSDPNNRCDMCADNRNGECPMHGPLHSLRRLVGTSSAAAAAPPPELPEWLRDLPREVCLCTSTVPGLAYGICAAQRIQQGTWIGPFQGVLLPPEKVQAGAVRNTQHLWEIYDQDGTLQHFIDGGEPSKSSWMRYIRCARHCGEQNLTVVQYRSNIFYRACIDIPRGTELLVWYNDSYTSFFGIPLQCIAQDENLNVPSTVVEAMCRQDALQPFNKSSKLTPATPQRSIVFPQTPCNRNFSLLDKSGPIESGFNQINVKNQRVLASPTSTSQLHSEFSDWHLWKCGQCFKTFTQRILLQMHVCTQNPDRPYQCGHCSQSFSQPSELRNHVVTHSSDRPFKCGYCGRAFAGATTLNNHIRTHTGEKPFKCERCERSFTQATQLSRHQRMPNECKPITESPESIEVD