Sequence details NCBI ID: XM_004854426.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ndst1
Gene Name N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1, transcript variant X3
Entrez Gene ID 101725305

Database interlinks

Part of NW_004624774.1 (Scaffold)

For more information consult the page for NW_004624774.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

NDST1 ENSCPOG00000002897 (Guinea pig)

Gene Details

N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002632, Guinea pig)

Protein Percentage 99.09%
CDS Percentage 93.31%
Ka/Ks Ratio 0.01047 (Ka = 0.0044, Ks = 0.4203)

NDST1 ENSG00000070614 (Human)

Gene Details

N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000261797, Human)

Protein Percentage 97.85%
CDS Percentage 92.14%
Ka/Ks Ratio 0.01787 (Ka = 0.0092, Ks = 0.5172)

Ndst1 ENSMUSG00000054008 (Mouse)

Gene Details

N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000126623, Mouse)

Protein Percentage 97.85%
CDS Percentage 90.25%
Ka/Ks Ratio 0.01591 (Ka = 0.0096, Ks = 0.6011)

Ndst1 ENSRNOG00000019014 (Rat)

Gene Details

N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 (Ndst1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000025881, Rat)

Protein Percentage 97.85%
CDS Percentage 90.4%
Ka/Ks Ratio 0.01618 (Ka = 0.0096, Ks = 0.5932)

Genome Location

Sequence Coding sequence

Length: 2649 bp    Location: 9758488..9821309   Strand: +
Raw sequence   
>XM_004854426.1
ATGCCTACCCTGGCGTGCCTCCGGAGGCTGTGTCGGCATGTGTCCCCACAGGCTGTCCTGTTTCTGCTGTTCGTCTTCTGCCTGTTCAGTGTTTTCGTCTCGGCCTACTACCTGTATGGCTGGAAGCGGGGCCTGGAGCCCTCGGTGGATGCCCCTGAGTCTGACTGTGGGGACCCGCCACCTGTGGCCCCCAGCCGCCTGCTGCCGCTGAAGCCTGTGCAGGTGGTTACCCCCTCCCGCACAGACCCGCTGGTCCTGGTGTTTGTGGAGAGCCTCTACTCGCAGCTGGGCCAGGAGGTAGTGGCTATCCTGGAGTCCAGCCGCTTCAAGTACCGCACAGAGATCGCACCCGGCAAGGGGGACATGCCCACACTCACTGACAAGGGCCGTGGCCGCTTTGCCCTCATCATCTACGAGAACATCCTCAAGTATGTCAACCTGGATGCCTGGAACCGTGAGCTGCTGGACAAGTACTGTGTGGCCTACGGTGTGGGCATCATTGGCTTCTTTAAGGCCAACGAGAACAGTCTGCTGAGTGCGCAACTCAAGGGCTTCCCGCTGTTCCTGCACTCAAACCTGGGCCTGAAGGACTGCAGCATCAACCCCAAGTCCCCGCTGCTCTATGTGACGCGGCCCAGTGAGGTGGAGAAGGGCGTGCTGCCCGGCGAGGACTGGACTGTGTTCCAGTCGAACCACTCCACCTATGAGCCGGTGCTGCTGGCCAAGACGCGCTCGTCTGAGTCCATCCCACACCTGGGCGCCGATGCCAGCCTACATGCCGCACTGCACGCCACTGTGGTGCAGGACCTGGGCCTCCATGACGGCATCCAGCGAGTGCTGTTTGGCAACAACCTCAACTTCTGGCTGCACAAGCTTGTCTTTGTGGATTCTGTGGCCTTCCTCACGGGGAAGCGCTTGTCATTGCCTTTGGACCGCTATATCTTGGTGGACATCGATGACATCTTTGTGGGCAAAGAGGGGACACGCATGAAGGTGGAGGACGTGAAGGCGCTGTTTGACACACAAAACGAGCTACGCACACACATCCCAAACTTCACCTTCAACCTGGGCTACTCAGGGAAATTCTTCCACACAGGTACAGATGCCGAAGATGCTGGGGATGACCTGTTGCTGTCATATGTGAAGGAGTTCTGGTGGTTCCCCCACATGTGGAGCCACATGCAGCCCCACCTTTTCCACAACCAGTCTGTGCTGGCTGAGCAGATGGCTCTGAACAAGAAGTTCGCTGTCGAGCATGGCATCCCCACGGACATGGGGTACGCCGTGGCCCCCCACCACTCGGGCGTATACCCCGTGCATGTGCAGCTGTACGAGGCGTGGAAGCAGGTGTGGAGCATCCGCGTGACCAGCACGGAGGAGTACCCACACCTGAAGCCGGCCCGCTACCGCCGCGGCTTCATCCACAACGGCATCATGGTCCTCCCGAGGCAGACATGTGGCCTCTTCACACATACCATCTTCTACAACGAGTACCCTGGCGGCTCCAGTGAGCTGGACAAGATCATCAACGGAGGCGAGCTCTTCCTCACTGTGCTTCTCAACCCCATCAGCATCTTTATGACGCACCTGTCCAACTATGGGAATGACCGCCTGGGTCTGTACACCTTTAAGCACCTGGTGCGCTTCCTGCACTCCTGGACCAACCTGCGGCTCCAGACGCTGCCTCCAGTGCAACTGGCCCAGAAATACTTCCAGATCTTTTCTGAGGAGAAGGACCCCCTCTGGCAGGACCCCTGTGAGGACAAACGCCACAAAGACATCTGGTCCAAGGAGAAGACATGTGACCGCTTCCCAAAGCTCCTCATCATTGGCCCTCAGAAAACAGGCACCACGGCCCTCTACTTATTCCTGGGAATGCATCCGGACCTAAGCAGCAACTACCCCAGCTCAGAGACCTTTGAGGAGATCCAGTTTTTTAACGGCCACAACTATCACAAAGGCATCGACTGGTACATGGAGTTCTTCCCCATCCCCTCCAACACCACCTCTGACTTCTACTTTGAGAAGAGCGCCAACTACTTTGATTCTGAAGTGGCGCCCCGGCGGGCAGCTGCCCTGTTGCCCAAGGCCAAGATTCTCACCATCCTCATTAACCCCGCGGACCGGGCCTATTCTTGGTACCAGCACCAGCGTGCCCACGATGACCCCGTGGCCCTGAAGTACACCTTCCATGAGGTGATCACAGCTGGACCTGATGCATCCTCGAAGCTGCATGCCCTCCAGAGCCGTTGCCTGGTCCCTGGCTGGTATGCTGCCCACATCGAGCGCTGGCTCAGTGCCTTCCACGCCAACCAGATTCTGGTCTTGGACGGCAAACTGCTGCGAACAGAACCTGCCAAAGTGATGGACACAGTGCAGAAATTCCTGGGGGTGACCAACACCATCGACTACCACAAAACCTTGGCGTTTGATCCAAAGAAAGGATTTTGGTGCCAGCTGCTTGAAGGAGGAAAAACCAAGTGTCTGGGCAAAAGCAAGGGCCGGAAATACCCAGAGATGGACCTGGACTCCCGAGCCTTCCTGAAGGACTACTACCGGGACCACAATGTTGAGCTTTCCAAGCTGCTGTACAAGATGGGCCAGACGTTGCCTACCTGGCTGCGGGAGGACCTCCAGAACACCAGGTAG

Related Sequences

XP_004854483.1 Protein

Ndst1 PREDICTED: bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1 isoform X3 [Heterocephalus glaber]

Length: 882 aa      View alignments
>XP_004854483.1
MPTLACLRRLCRHVSPQAVLFLLFVFCLFSVFVSAYYLYGWKRGLEPSVDAPESDCGDPPPVAPSRLLPLKPVQVVTPSRTDPLVLVFVESLYSQLGQEVVAILESSRFKYRTEIAPGKGDMPTLTDKGRGRFALIIYENILKYVNLDAWNRELLDKYCVAYGVGIIGFFKANENSLLSAQLKGFPLFLHSNLGLKDCSINPKSPLLYVTRPSEVEKGVLPGEDWTVFQSNHSTYEPVLLAKTRSSESIPHLGADASLHAALHATVVQDLGLHDGIQRVLFGNNLNFWLHKLVFVDSVAFLTGKRLSLPLDRYILVDIDDIFVGKEGTRMKVEDVKALFDTQNELRTHIPNFTFNLGYSGKFFHTGTDAEDAGDDLLLSYVKEFWWFPHMWSHMQPHLFHNQSVLAEQMALNKKFAVEHGIPTDMGYAVAPHHSGVYPVHVQLYEAWKQVWSIRVTSTEEYPHLKPARYRRGFIHNGIMVLPRQTCGLFTHTIFYNEYPGGSSELDKIINGGELFLTVLLNPISIFMTHLSNYGNDRLGLYTFKHLVRFLHSWTNLRLQTLPPVQLAQKYFQIFSEEKDPLWQDPCEDKRHKDIWSKEKTCDRFPKLLIIGPQKTGTTALYLFLGMHPDLSSNYPSSETFEEIQFFNGHNYHKGIDWYMEFFPIPSNTTSDFYFEKSANYFDSEVAPRRAAALLPKAKILTILINPADRAYSWYQHQRAHDDPVALKYTFHEVITAGPDASSKLHALQSRCLVPGWYAAHIERWLSAFHANQILVLDGKLLRTEPAKVMDTVQKFLGVTNTIDYHKTLAFDPKKGFWCQLLEGGKTKCLGKSKGRKYPEMDLDSRAFLKDYYRDHNVELSKLLYKMGQTLPTWLREDLQNTR