Details from NCBI annotation

Gene Symbol Pdgfrb
Gene Name platelet-derived growth factor receptor, beta polypeptide
Entrez Gene ID 101721151

This gene is present in the GenAge database and has been identified as potentially important to ageing in humans.

Database interlinks

Part of NW_004624774.1 (Scaffold)

For more information consult the page for NW_004624774.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PDGFRB ENSCPOG00000005994 (Guinea pig)

Gene Details

platelet-derived growth factor receptor, beta polypeptide

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005411, Guinea pig)

Protein Percentage 94.22%
CDS Percentage 92.6%
Ka/Ks Ratio 0.09688 (Ka = 0.0282, Ks = 0.2909)

PDGFRB ENSG00000113721 (Human)

Gene Details

platelet-derived growth factor receptor, beta polypeptide

External Links

Gene Match (Ensembl Protein ID: ENSP00000261799, Human)

Protein Percentage 87.52%
CDS Percentage 87.16%
Ka/Ks Ratio 0.12866 (Ka = 0.066, Ks = 0.5128)

Pdgfrb ENSMUSG00000024620 (Mouse)

Gene Details

platelet derived growth factor receptor, beta polypeptide

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000025522, Mouse)

Protein Percentage 85.34%
CDS Percentage 83.79%
Ka/Ks Ratio 0.1076 (Ka = 0.0796, Ks = 0.7396)

Pdgfrb ENSRNOG00000018461 (Rat)

Gene Details

platelet derived growth factor receptor, beta polypeptide (Pdgfrb), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000060534, Rat)

Protein Percentage 86.05%
CDS Percentage 84.66%
Ka/Ks Ratio 0.11549 (Ka = 0.0753, Ks = 0.6518)

Genome Location

Sequence Coding sequence

Length: 3360 bp    Location: 9454991..9432765   Strand: -
>XM_004854412.1
ATGATGGGCCCTGACTCCTATTTCACTCCACAGGCCAATATGCAGCTTCCATGTGTGATGCCATCTCCGGGCCTTCAAGGCCAGTTGCTGTTGCTGCCACTGCTGTTGCTGCTGGGACCACAGATCTCCCAAGGCCTGGTCATCACGCCCCCTGGGCCAGAGCTGGTTCTCAATCTCTCTAGCACCTTTGTTCTGACCTGCTCGGGTTCGGCTCCAGTGGTGTGGGAACGAATGTCCCAGGTACCCCCACAGGAAATGGTCGTGACCCAGGATGGCACCTTCACCAGCGTGCTGACACTGACCAATGTCACTGGCGGAGACACAGGAGAATACTTTTGCACCTACAACAGTTCTGTCGAGCTGGAGCCCAGTGAGCAGAAGCGGCTGTACATCTTTGTGCCAGATCCCAGCATGAGCTTCCTCCCGATAGACCCTGAGGATACATTTGTCTTTGTCACGGAGATAACTGACCCCACCATCCCATGCCGAGTTACAGACCCCCAGCTGGTGGTGACACTGCATGAGAAGAAAGAAGACATCCCTCTACCTATTCCCTATGACCACCAGCGAGGTTTCATTGGTACCTTGGAGGACAAGACCTACATCTGCAAAACCACCATTGGGGACAGGGAAGTGGATTCTGATGCCTACTATGTCTACAGCCTCCAGGTGTCATCCATCAATGTCTCTGTGAATGCAGTACAGACTGTGGTCCGCCAGGGTGAGAACATCACTATCATGTGCATTGTGACGGGGAATGAGGTGGTCAACTTTGAGTGGATGTACCCCCGAAAGGAGAGTGGACAGCAGGTCGAGTCGGTGACGGACTTCCTCCCCGACATGCCCAACCACATTCGCTCCATCCTGCACATCCAAGACGCCGAGCTGGGCGACTCAGGAACCTACATCTGCAACGTGTCTGAGAGTGTGAATGAGCACCGAGACGAGAAGGCTGTCAACGTCACAGTGGTCGAGAGAGGCTACGTGAGGCTGCTGCAAGGGCTGGGTGCAGTAGAAATTGCTGAGCTGCACCAGAGCCGGACACTGCAAGTGATGATCGAGGCTTACCCTCCGCCCACTGTCCTATGGTTCAAAGACAACCGCACCCTGGGTGACTCCAGTGTCGGCGAGATAGTCCTGTCCACACGCAATGTGTCCGAGACCCGGTATGTGTCGGAGCTGACGCTGGTTCGGGTGAAGGTGGCAGAGGCCGGCAGTTACACCATGCGGGCCTTCCATGAGGATGATGAGGACCAGCTCTCTTTCAAGCTGCAGGTCAATGTCCCTGTCCGAGTGCTGGAGCTGAGTGAGAGCCATCCTGCCAGTGGGGAGCAGACAGTCCGCTGTCGTGGGCGAGGCATGCCGCAGCCACATGTCACCTGGTTTACCTGCAGAGACCTCAAAAGGTGTCCTCACGAGCTGCCGCCCACGCCTCTGGGGAACAGTTCGGAAGAGGAGAGCCATTTGGAAACCAACATGACATATTGGGCGGAGGAGCAGGAGTATGAGGTGGTGAGCACGCTGCGCCTGCGCCACGTGGACCAGCAACTGTCGGTGTTCTGCATGGTACACAACCTGCTGGGCCAGGACGTGCAGGAGGTCACCGTGGTGCCGCATTCCCTGCCCTTCAAGGTGGTGGTGATCTCAGCCATACTGGCCTTGGTGGTTCTCACCATCATCTCCCTCATCATCCTCATCATACTCTGGCAGAAGAAACCACGCTATGAAATCCGATGGAAGGTGATCGAGTCTGTGAGTTCCGATGGCCACGAGTACATCTACGTAGACCCGGTGCAGCTGCCCTATGACTCCACGTGGGAGCTGCCTCGGGACCAGCTTGTGCTCGGACGCACGCTCGGCTCCGGGGCCTTTGGGCAGGTGGTGGAGGCCACAGCTCATGGCCTGGGTCATTCACAGAGCACCATGAAAGTGGCCGTCAAGATGCTGAAATCCACAGCCCGTAGCAGTGAGAAGCAAGCCCTCATGTCGGAGCTGAAGATCATGAGTCACCTTGGGCCCCACCTGAACGTGGTCAACCTGCTGGGGGCCTGCACCAAAGGAGGACCCATCTACATCATCACCGAGTACTGCCGCTACGGCGACCTGGTGGACTACTTGCACCGCAATAAGCACACCTTCCTGCAGCACCACTTGGACAAGCGACGCCCAGCCAGCATTGAGCTGTACAGCAATGCCTTGCCAGTGGGGTTCTCCTTGCCCAGCCCCGTGTCCTTGAGTGGGGAGAGTGATGGTGGCTACATGGACATGAGCAAGGATGAGTCAGTGGACTACGTGCCCATGCTGGACATGAAAGGAGACATCAAATACGCAGACATTGAGTCCTCCAACTACATGGCTCCTTATGATAACTACGTCCCCTCTGCCCCTGAGAGGACTTATCGAGCAACTCTGATCAATGAGTCCCCGTTGCTTAGCTACACAGACCTCGTGGGCTTCAGCTACCAGGTGGCAAATGGCATGGAGTTCCTGGCCTCCAAGAATTGTGTCCACCGAGACCTGGCAGCCAGGAATGTGCTCATCTGCGAAGGCAAGCTAGTCAAGATCTGTGACTTTGGGCTGGCTCGAGACATCATGCGAGACTCGAACTACATCTCCAAAGGCAGCACCTTCCTGCCTCTGAAGTGGATGGCCCCGGAGAGCATCTTCAACAGCCTCTACACCACCCTGAGTGATGTGTGGTCCTTTGGCATCCTCCTCTGGGAGATCTTCACGCTGGGTGGCACACCTTACCCAGAGCTGCCCATGAACGAGCAGTTCTACAATGCCATCAAGCGGGGCTACCGCATGGCCCAGCCTGCTCATGCCGCCGATGAGATCTATGAGATCATGCAGAAGTGCTGGGAAGAGAAGTTTGAGATTCGGCCTCCCTTCTCCCAGCTGGTGCTGCTTCTGGAGAGACTGCTGGGTGAGGGTTACAAAAAGAAGTACCAGCAGGTTGACGAGGAGTTTCTGAGGAGCGACCACCCAGCCATCCTTCGGTCCCAAGCTCGCTTGCCTGGGTTCCATGGCCTCCGGTCTCCCCTGGACACCAGCTCTGTCCTCTACACTGCTGTACAGCCCAACGAGGGTGACAATGACTACATCATCCCCCTGCCTGACCCCAAACCCGAGGTTGCTGAGGAGGGCCGGCTGGAGGGATCCCCCAGCATTGCCAGCTCCACCCTGCATGAAGCCAACACTTCCTCTACCATCTCCTGTGATAGCCCCCTGGACCCGCAAGAGGAACCAGAGCCAGAGCCAGAGCCCGAGCCCCAGGTGGAGCCAGAGCCGGAGCTGGAGCAGCCTCAAAATTCAGGCTGCCCCGGGCCCCAGGTCGAAGTGGAGGACAGCTTCCTGTAG

Related Sequences

XP_004854469.1 Protein

Pdgfrb PREDICTED: platelet-derived growth factor receptor beta [Heterocephalus glaber]

Length: 1119 aa      View alignments
>XP_004854469.1
MMGPDSYFTPQANMQLPCVMPSPGLQGQLLLLPLLLLLGPQISQGLVITPPGPELVLNLSSTFVLTCSGSAPVVWERMSQVPPQEMVVTQDGTFTSVLTLTNVTGGDTGEYFCTYNSSVELEPSEQKRLYIFVPDPSMSFLPIDPEDTFVFVTEITDPTIPCRVTDPQLVVTLHEKKEDIPLPIPYDHQRGFIGTLEDKTYICKTTIGDREVDSDAYYVYSLQVSSINVSVNAVQTVVRQGENITIMCIVTGNEVVNFEWMYPRKESGQQVESVTDFLPDMPNHIRSILHIQDAELGDSGTYICNVSESVNEHRDEKAVNVTVVERGYVRLLQGLGAVEIAELHQSRTLQVMIEAYPPPTVLWFKDNRTLGDSSVGEIVLSTRNVSETRYVSELTLVRVKVAEAGSYTMRAFHEDDEDQLSFKLQVNVPVRVLELSESHPASGEQTVRCRGRGMPQPHVTWFTCRDLKRCPHELPPTPLGNSSEEESHLETNMTYWAEEQEYEVVSTLRLRHVDQQLSVFCMVHNLLGQDVQEVTVVPHSLPFKVVVISAILALVVLTIISLIILIILWQKKPRYEIRWKVIESVSSDGHEYIYVDPVQLPYDSTWELPRDQLVLGRTLGSGAFGQVVEATAHGLGHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNVVNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQHHLDKRRPASIELYSNALPVGFSLPSPVSLSGESDGGYMDMSKDESVDYVPMLDMKGDIKYADIESSNYMAPYDNYVPSAPERTYRATLINESPLLSYTDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNSLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMAQPAHAADEIYEIMQKCWEEKFEIRPPFSQLVLLLERLLGEGYKKKYQQVDEEFLRSDHPAILRSQARLPGFHGLRSPLDTSSVLYTAVQPNEGDNDYIIPLPDPKPEVAEEGRLEGSPSIASSTLHEANTSSTISCDSPLDPQEEPEPEPEPEPQVEPEPELEQPQNSGCPGPQVEVEDSFL