Sequence details NCBI ID: XM_004854387.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Afap1l1
Gene Name actin filament associated protein 1-like 1, transcript variant X2
Entrez Gene ID 101712764

Database interlinks

Part of NW_004624774.1 (Scaffold)

For more information consult the page for NW_004624774.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

AFAP1L1 ENSCPOG00000014925 (Guinea pig)

Gene Details

actin filament associated protein 1-like 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013450, Guinea pig)

Protein Percentage 92.7%
CDS Percentage 91.35%
Ka/Ks Ratio 0.09814 (Ka = 0.0352, Ks = 0.3582)

AFAP1L1 ENSG00000157510 (Human)

Gene Details

actin filament associated protein 1-like 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000296721, Human)

Protein Percentage 90.63%
CDS Percentage 88.72%
Ka/Ks Ratio 0.0951 (Ka = 0.0467, Ks = 0.491)

Afap1l1 ENSMUSG00000033032 (Mouse)

Gene Details

actin filament associated protein 1-like 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000113286, Mouse)

Protein Percentage 88.53%
CDS Percentage 85.66%
Ka/Ks Ratio 0.07931 (Ka = 0.0585, Ks = 0.7377)

Afap1l1 ENSRNOG00000019403 (Rat)

Gene Details

actin filament associated protein 1-like 1 (Afap1l1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000026495, Rat)

Protein Percentage 87.48%
CDS Percentage 85.44%
Ka/Ks Ratio 0.09063 (Ka = 0.0647, Ks = 0.7137)

Genome Location

Sequence Coding sequence

Length: 2307 bp    Location: 8640697..8701107   Strand: +
Raw sequence   
>XM_004854387.1
ATGGACCGAGGCCGGGTGCTGGAGCAGCTGCTCCCAGAGCTCACTGGGCTGCTCAGCCTCCTGGACAATGAGGACCTAAGTGACAGCACACTGGAGAAGAAGATGGCAGTGGCCTCCATCCTGCAGAGCCTGCAGCCCCTCCCAGCAAAGGAAGTCTCCTACTTGTATGTGAACACTGCAGACCTCCACTCGGGGCCCAGCTTCGTGGAGTCCCTCTTTGAAGAGTTTGACTGTGACCTGAGTGACCTCCGGGACATGCCAGAGGAGGACGGGGAGCCCAGCAAAGGAATGAGCCCTGAGCCAGCAGAAAGCCCACCTCTGAGAACTGTAGCCAACCCTCCTCCGCCACTGCCCAACAAGCCTCCTCCGGAGGACTACTATGAGGAGGCCCTTCCTCTGGGACCTGGCAAGTCTCCTGAGTATATCAGCTCCCACAATGGCAGCAGCCCAGCCCATTCCATTGTGGATGGCTACTATGAGGACGCAGACAGCAGCTACCCTACCACCAGGATGAACGGCGAGCTGAAGCACTCCTACAATGACTCTGACGCGATGAGCAGCTCCTACGAGTCCTACGATGAGGAGGAGGAAGAAGGCAAGGGCCCACAGCCCAGGCACCAGTGGCCCTCAGAGGAGGCCTCTATGCATCTGGTGAGGGATTGCAGGATATGTTCCTTCCTGCTTCGGAAAAAGCGCTTTGGGCAGTGGGCCAAGCAGCTGACTGTCATCAAGGAGGACCAGCTCCTGTGTTATAAAAGCTCCAAGGACCGGCAGCCGCATCTGAGGCTGGCTCTGGATATCTGCAGTGTCATCTATGTGCCCAAGGACAGCAGGCACAAGAGGCACGAGCTGCGCTTCTCCCAGGGGGCCAGTGAGGTCTTGGTGCTGGCACTGCAAAGCCGGGAGCAGGCCGAGGAGTGGCTGAAGGTCATCCGTGAGGTCAGCAAGCCCATCACAGGAGCAGATGGAGTGGAGGCGCCCCAGTCCCCAGTGCTCCAATGCAAGCTGGACCTGGACAAGAGGCTGTCTCAAGAGAAGCAGGCCTCAGACTCTGACAGCCTAGGCATGGGCGACAACGGTTCCAGCCTCAGCCGCAGGGAAGCCTGTGAACATGGCAAAGGGAAGAAGAGCAGCTTGGCAGAGCTAAAGGGCTCCATGAGCCGGGCCGCAGGCCGCAAGATCACCCGCATTATCAGCTTCTCCAAGAAGAAGGCCCTGGCTGAGGATCTGCAGATGTCCTCCGCTGAGGAGGAGGTGCCATGCTGTGGCTACCTGAACATCCTGGTGAACCAGGGCTGGAAGGAGCGCTGGTGCCGCCTCAAGAGCGGCACCCTGTACTTTCACAAGGACCGAGCCGACCTGCACACCCACGTGAACGCCATCGCCCTCCACGGCTGCGAGGTGGCCCCCGGCTTCGGGCCCAGACACCCATTTGCTTTCAGGATCCTACGCAACCGGCAGGAAGTGGCCATCCTGGAGGCAAGCTGCTCAGAGGACATGGGTCGCTGGCTTGGGCTGTTGCTGGTGGAGATGGGCTCCAGAGTCACTCCAGAGGCGCTGCACTATGACTACGTGGACGTGGAGACCTTAACCAGCATCGTGACTGCTGGGCGCAACTCCTTCCTATATGCAAGATCCTGCCAGGATCAGTGGCCTGAGCCCCGTGTCTATGACGATGTTCCTTATGAAAAGATCCAGGATGAGAAGCCCGAGCACCCCACTGGGGCCCAGGTGAAGCGCCACGCCTCCTCCTGCAGTGAGAAGTCTCATCGAGTGGACCCACAGGTCAAAGTCAAGCGCCATGCCTCCAGTGCCAATCAGTACAAGTATGGCAAGAACCGAGCTGAAGAGGATGCCCGGAGGTACCTGGTAGAAAAAGAGAAGCTGGAGAAAGAGAAAGAAACAATTCGGACAGAGTTGATGTCCCTGCGACAGGAGAAAAGAGAGCTAAAGGAAGCTATTCGGAGCAGCCCAGGAGCAAAGCTAAAGGCTCTGGAGGAAGCTGTGGTCACCCTGGAAGCACAGTGTCGAGAGAGGGAGGAGCGCCGGATAGACCTGGAGTTGCGGCTGGTGGCTGTGAAAGACCGCTTGCAGCAGTCTCTGGCAGGGGGCCCTACCCTAGGCCTCTCCATGAGCACCAAGAACAAAAGTACGGAAACTGCAAATAAACCCCAAAACAATGTCCCAGAGCAGTCTCTCCCTGTCAATTGTGTTTCTGAGCTACGGAAGAGGAGCCCATCCATCGTAACCTCCAACCAAGGAAGGGTGCTGCAGAAAGCCAAGGAATGGGAAATGAAGAAGACCTAG

Related Sequences

XP_004854444.1 Protein

Afap1l1 PREDICTED: actin filament-associated protein 1-like 1 isoform X2 [Heterocephalus glaber]

Length: 768 aa      View alignments
>XP_004854444.1
MDRGRVLEQLLPELTGLLSLLDNEDLSDSTLEKKMAVASILQSLQPLPAKEVSYLYVNTADLHSGPSFVESLFEEFDCDLSDLRDMPEEDGEPSKGMSPEPAESPPLRTVANPPPPLPNKPPPEDYYEEALPLGPGKSPEYISSHNGSSPAHSIVDGYYEDADSSYPTTRMNGELKHSYNDSDAMSSSYESYDEEEEEGKGPQPRHQWPSEEASMHLVRDCRICSFLLRKKRFGQWAKQLTVIKEDQLLCYKSSKDRQPHLRLALDICSVIYVPKDSRHKRHELRFSQGASEVLVLALQSREQAEEWLKVIREVSKPITGADGVEAPQSPVLQCKLDLDKRLSQEKQASDSDSLGMGDNGSSLSRREACEHGKGKKSSLAELKGSMSRAAGRKITRIISFSKKKALAEDLQMSSAEEEVPCCGYLNILVNQGWKERWCRLKSGTLYFHKDRADLHTHVNAIALHGCEVAPGFGPRHPFAFRILRNRQEVAILEASCSEDMGRWLGLLLVEMGSRVTPEALHYDYVDVETLTSIVTAGRNSFLYARSCQDQWPEPRVYDDVPYEKIQDEKPEHPTGAQVKRHASSCSEKSHRVDPQVKVKRHASSANQYKYGKNRAEEDARRYLVEKEKLEKEKETIRTELMSLRQEKRELKEAIRSSPGAKLKALEEAVVTLEAQCREREERRIDLELRLVAVKDRLQQSLAGGPTLGLSMSTKNKSTETANKPQNNVPEQSLPVNCVSELRKRSPSIVTSNQGRVLQKAKEWEMKKT