Sequence details NCBI ID: XM_004854306.1 (Coding sequence)

Details from NCBI annotation

Gene Symbol Pcdh1
Gene Name protocadherin 1, transcript variant X2
Entrez Gene ID 101712998

Database interlinks

Part of NW_004624774.1 (Scaffold)

For more information consult the page for NW_004624774.1 (Scaffold)

Genome Location

Sequence Coding sequence

Length: 3345 bp    Location: 1097854..1075137   Strand: -
Raw sequence   
>XM_004854306.1
ATGGACAGCGAGGCCGGCGGCCGGTGCAGCCCCGAGGCGGCCCTCCTGATTCTGAAACCTGCCAGGATGGGGCTCCTGAGGCCCAGCCCAGGCCCTGGGGGCCAGCGTTTGCTGCTGCCCCCCTTGATGCTGGCCCTGGTGCTCCTGTTGGCTCCATCTGCAGGCCAGGCCACTCGGGTGGTATACAAGGTGCCTGAGGAACAGCCACCCAACACCCTCATTGGGAGCCTCGCAGCTGACTATGGTTTTCCAGACGTGGGCCACCTGTACAAACTAGAGGTAGGTGCCCCATATCTTCGAGTGGAAGGCAAGACAGGTGACATTTTCACCACTGAGACCTCCATTGACCGTGAGGGGCTCCGTGAATGCCAAAACCAGCTGCCTGGTGAGCCCTGCATCCTGGAGTTTGAGGTGTCTATCACAGACCTTATGCAGAATGGCAGCCCCCGGTTGCTAGAGGGCCAGATAGAGGTACAGGACATCAATGACAACACGCCCAACTTCTCCTCACCAGTCATCACTCTGTCCATCCCCGAGAATACGAACATCGGCTCGCTCTTCCCAATCCCACTGGCTACAGATCGTGATGCTGGCCCCAACGGTGTGGCATCATATGAACTGCAAGCCAAACCTGAGGCCCAGGAGCTATTTGGGCTGCAGGTAGCTGAGGACCAGGAAGAGAAGCAGCCACAGCTCATTGTGATGGGCAACCTGGACCGAGAGCGCCGGGATTCCTATGACCTCAACATCAAGGTGCAGGATGGCGGCAGCCCCCCACGAGCCAGCAGTGCCCTGCTGCGTGTCACTGTGCTCGACACCAATGACAACGCTCCCAAGTTCGAGCGGCCCTCTTATGAGGCCGAGCTGTCTGAGAACAGTCCCATAGGCCACTCAGTCATCCAGGTGAAGGCCAATGACTCAGACCAAGGTGCCAATGCTGAGATCGACTACACGTTCCACCAGGCACCCGAAGTGGTGAGGCGTCTTTTGCGACTGGACAGAAACACTGGACTTATCACTGTCCAGGGTCCCGTGGACCGTGAGGACCTAAGCACCCTCCGCTTCTCAGTTCTCGCCAAGGACCGAGGTGCCAACCCGAAGAGTGCCCGTGCCCAGGTGGTCGTGACTGTGAAGGACATGAATGACAATGCCCCAACCATTGAGATCCGAGGCATAGGGCTTGTGACCCATCAAGATGGGATGGCTAACATTTCAGAGGATGTGGCAGAGGAGACAGCTGTGGCCCTGGTACAGGTATCTGACCGAGATGAGGGAGAAAATGCAGCTGTCACCTGTGTGGTAGCAGGTGATGTGCCCTTCCAGCTACGCCAAGCCAGCGAGACAGGCAGTGACAGCAAGAAGAAGTACTTCCTGCAGACCACCACCCCGCTGGACTACGAGAAGGTCAAAGACTACACTATTGAGATTGTGGCTGTGGACTCTGGCAACCCCCCACTCTCCAGCACCAACTCCCTTAAGGTGCAGGTGGTGGACATCAATGACAATGCGCCCGTCTTTACCCAGAGCATCACTGAGGTCGCCTTCCCAGAAAACAACAAGCCAGGTGAAGTGGTGGCAGAGGTCACTGCCACTGATGCTGACTCTGGCTCTAATGCAGAGCTGGTGTACTCTCTGGAGCCTGAGCCGGCTGCCCAGGGTCTCTTTAGTATCTCACCTGAAAATGGAGAGATCCGGGTGAAGACATCCCTTGATCGGGAACAGAGGGACAGTTACGAGTTGAAGGTGGTAGCAGCTGACCGGGGCAGCCCCAGCCTCAAGGGCACAGCCACTGTCCTCATCAATGTGCTAGACTGCAATGACAATGACCCCAAATTTATGCTGAGTGGCTACAACTTCTCAGTGATGGAGAACATGCCTGCGCTGAGTCCAGTGGGCATGGTGACTGTCATTGATGGGGACAAGGGGGAGAATGCCCGGGTGCAGCTCTCGGTTGAACAGGACAATGGTGACTTTGTTATCCAGAATGGCACAGGCACCATCTTGTCCAGCCTGAGCTTTGATCGAGAGCAACAGAGCATCTACACCTTTCAGCTGAAGGCAGTCGATGGTGGTGTCCCACCTCGCTCAGCTTATGTTGGTGTCACCATCAATGTCCTGGATGAGAACGACAATGCACCTTTTATCACTGCCCCATCCAACACGTCCCACCGGCTGCTGACCCCCCAGACACGTCTTGGTGAGACAGTGAGCCAGGTGACAGCTGAGGACATTGACTCTGGTGTTAATGCTGAGCTGATCTATAGCATTGCTGGTGGCAACCCTTATGGACTCTTTCAGATTGGGTCACATTCAGGTGCCATCACCCTGGAGAAGGAGATTGAGCGGCGCCACCATGGGCTACACCGCCTTGTGGTGAAGGTCAGTGACCGTGGCAAACCACCACGCTATGGCACAGCCCTGGTCCACCTTTATGTCAATGAGACGCTAGCCAACCGCACACTGCTGGAGACCCTCCTGGGCCACAGCCTGGACACGCCCCTGGATATCGACATTGCTGGGGACCCAGAATACGAGCGCTCCAAGCAGCGTGGTAACATCCTCTTCGGTGTAGTGGCTGGTGTTGTGGCTGTGGCCTTGCTCATCGCCCTAGCAGTACTTGTGCGCTACTGCCGGCAGCGGGAGGCCAAGAGCGGCTACCAGGCTGGCAAGAAGGAGACCAAGGACCTGTATGCCCCCAAGCCCAGTGGCAAAGCCTCCAAGGGAAACAAAAGCAAGGGCAAGAAGAGCAAGTCCCCGAAGCCAGTGAAGCCAGTGGAGGATGAAGATGAGGCTGGGCTGCAGAAGTCCCTCAAGTTCAACCTGATGAGTGATGCACCTGGGGACAGTCCCCGAATCCACCTGCCCCTCAACTACCCACCCGGCAGCCCGGACCTGGGCCGCCACTACCGCTCTAACTCCCCTCTGCCTTCCATCCAGCTGCAGCCCCAGTCACCCTCAGCCTCCAAGAAGCACCAGGTGGTACAGGACCTGCCGCCTGCAAACACATTTGTGGGCACCGGGGACACCACGTCCACGGGCTCCGAGCAGTACTCCGACTACAGCTACCGCACCAACCCCCCAAAATACCCCAGCAAGCAGTTACCTCACCGCCGTGTCACCTTTTCGGCCACTAGCCAGGCCCAGGAGCTGCAGGACCCATCCCAGCACAGTTACTATGATAGCGGTCTGGAGGAGTCTGAGACACCATCCAGCAAGTCATCCTCGGGACCCCGACTTGGTCCTTTGGCCCTGCCTGAAGATCATTATGAACGCACCACCCCTGATGGCAGCATAGGAGAGATGGAGCACCCCGAGAATGAGCCGGCTGGCCGGAGCAGGCCCTGA

Related Sequences

XP_004854363.1 Protein

Pcdh1 PREDICTED: protocadherin-1 isoform X2 [Heterocephalus glaber]

Length: 1114 aa      
>XP_004854363.1
MDSEAGGRCSPEAALLILKPARMGLLRPSPGPGGQRLLLPPLMLALVLLLAPSAGQATRVVYKVPEEQPPNTLIGSLAADYGFPDVGHLYKLEVGAPYLRVEGKTGDIFTTETSIDREGLRECQNQLPGEPCILEFEVSITDLMQNGSPRLLEGQIEVQDINDNTPNFSSPVITLSIPENTNIGSLFPIPLATDRDAGPNGVASYELQAKPEAQELFGLQVAEDQEEKQPQLIVMGNLDRERRDSYDLNIKVQDGGSPPRASSALLRVTVLDTNDNAPKFERPSYEAELSENSPIGHSVIQVKANDSDQGANAEIDYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVLAKDRGANPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEETAVALVQVSDRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDINDNAPVFTQSITEVAFPENNKPGEVVAEVTATDADSGSNAELVYSLEPEPAAQGLFSISPENGEIRVKTSLDREQRDSYELKVVAADRGSPSLKGTATVLINVLDCNDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENARVQLSVEQDNGDFVIQNGTGTILSSLSFDREQQSIYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPFITAPSNTSHRLLTPQTRLGETVSQVTAEDIDSGVNAELIYSIAGGNPYGLFQIGSHSGAITLEKEIERRHHGLHRLVVKVSDRGKPPRYGTALVHLYVNETLANRTLLETLLGHSLDTPLDIDIAGDPEYERSKQRGNILFGVVAGVVAVALLIALAVLVRYCRQREAKSGYQAGKKETKDLYAPKPSGKASKGNKSKGKKSKSPKPVKPVEDEDEAGLQKSLKFNLMSDAPGDSPRIHLPLNYPPGSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQVVQDLPPANTFVGTGDTTSTGSEQYSDYSYRTNPPKYPSKQLPHRRVTFSATSQAQELQDPSQHSYYDSGLEESETPSSKSSSGPRLGPLALPEDHYERTTPDGSIGEMEHPENEPAGRSRP