| Gene Symbol | Pcdh1 |
|---|---|
| Gene Name | protocadherin 1, transcript variant X1 |
| Entrez Gene ID | 101712998 |
For more information consult the page for NW_004624774.1 (Scaffold)
The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.
| Protein Percentage | 98.78% |
|---|---|
| CDS Percentage | 94.97% |
| Ka/Ks Ratio | 0.0257 (Ka = 0.0056, Ks = 0.2163) |
protocadherin 1
| Protein Percentage | 96.44% |
|---|---|
| CDS Percentage | 92.62% |
| Ka/Ks Ratio | 0.05597 (Ka = 0.0172, Ks = 0.307) |
| Protein Percentage | 94.8% |
|---|---|
| CDS Percentage | 87.73% |
| Ka/Ks Ratio | 0.04864 (Ka = 0.0296, Ks = 0.6076) |
| Protein Percentage | 94.2% |
|---|---|
| CDS Percentage | 87.38% |
| Ka/Ks Ratio | 0.05283 (Ka = 0.0331, Ks = 0.6268) |
>XM_004854305.1 ATGGACAGCGAGGCCGGCGGCCGGTGCAGCCCCGAGGCGGCCCTCCTGATTCTGAAACCTGCCAGGATGGGGCTCCTGAGGCCCAGCCCAGGCCCTGGGGGCCAGCGTTTGCTGCTGCCCCCCTTGATGCTGGCCCTGGTGCTCCTGTTGGCTCCATCTGCAGGCCAGGCCACTCGGGTGGTATACAAGGTGCCTGAGGAACAGCCACCCAACACCCTCATTGGGAGCCTCGCAGCTGACTATGGTTTTCCAGACGTGGGCCACCTGTACAAACTAGAGGTAGGTGCCCCATATCTTCGAGTGGAAGGCAAGACAGGTGACATTTTCACCACTGAGACCTCCATTGACCGTGAGGGGCTCCGTGAATGCCAAAACCAGCTGCCTGGTGAGCCCTGCATCCTGGAGTTTGAGGTGTCTATCACAGACCTTATGCAGAATGGCAGCCCCCGGTTGCTAGAGGGCCAGATAGAGGTACAGGACATCAATGACAACACGCCCAACTTCTCCTCACCAGTCATCACTCTGTCCATCCCCGAGAATACGAACATCGGCTCGCTCTTCCCAATCCCACTGGCTACAGATCGTGATGCTGGCCCCAACGGTGTGGCATCATATGAACTGCAAGCCAAACCTGAGGCCCAGGAGCTATTTGGGCTGCAGGTAGCTGAGGACCAGGAAGAGAAGCAGCCACAGCTCATTGTGATGGGCAACCTGGACCGAGAGCGCCGGGATTCCTATGACCTCAACATCAAGGTGCAGGATGGCGGCAGCCCCCCACGAGCCAGCAGTGCCCTGCTGCGTGTCACTGTGCTCGACACCAATGACAACGCTCCCAAGTTCGAGCGGCCCTCTTATGAGGCCGAGCTGTCTGAGAACAGTCCCATAGGCCACTCAGTCATCCAGGTGAAGGCCAATGACTCAGACCAAGGTGCCAATGCTGAGATCGACTACACGTTCCACCAGGCACCCGAAGTGGTGAGGCGTCTTTTGCGACTGGACAGAAACACTGGACTTATCACTGTCCAGGGTCCCGTGGACCGTGAGGACCTAAGCACCCTCCGCTTCTCAGTTCTCGCCAAGGACCGAGGTGCCAACCCGAAGAGTGCCCGTGCCCAGGTGGTCGTGACTGTGAAGGACATGAATGACAATGCCCCAACCATTGAGATCCGAGGCATAGGGCTTGTGACCCATCAAGATGGGATGGCTAACATTTCAGAGGATGTGGCAGAGGAGACAGCTGTGGCCCTGGTACAGGTATCTGACCGAGATGAGGGAGAAAATGCAGCTGTCACCTGTGTGGTAGCAGGTGATGTGCCCTTCCAGCTACGCCAAGCCAGCGAGACAGGCAGTGACAGCAAGAAGAAGTACTTCCTGCAGACCACCACCCCGCTGGACTACGAGAAGGTCAAAGACTACACTATTGAGATTGTGGCTGTGGACTCTGGCAACCCCCCACTCTCCAGCACCAACTCCCTTAAGGTGCAGGTGGTGGACATCAATGACAATGCGCCCGTCTTTACCCAGAGCATCACTGAGGTCGCCTTCCCAGAAAACAACAAGCCAGGTGAAGTGGTGGCAGAGGTCACTGCCACTGATGCTGACTCTGGCTCTAATGCAGAGCTGGTGTACTCTCTGGAGCCTGAGCCGGCTGCCCAGGGTCTCTTTAGTATCTCACCTGAAAATGGAGAGATCCGGGTGAAGACATCCCTTGATCGGGAACAGAGGGACAGTTACGAGTTGAAGGTGGTAGCAGCTGACCGGGGCAGCCCCAGCCTCAAGGGCACAGCCACTGTCCTCATCAATGTGCTAGACTGCAATGACAATGACCCCAAATTTATGCTGAGTGGCTACAACTTCTCAGTGATGGAGAACATGCCTGCGCTGAGTCCAGTGGGCATGGTGACTGTCATTGATGGGGACAAGGGGGAGAATGCCCGGGTGCAGCTCTCGGTTGAACAGGACAATGGTGACTTTGTTATCCAGAATGGCACAGGCACCATCTTGTCCAGCCTGAGCTTTGATCGAGAGCAACAGAGCATCTACACCTTTCAGCTGAAGGCAGTCGATGGTGGTGTCCCACCTCGCTCAGCTTATGTTGGTGTCACCATCAATGTCCTGGATGAGAACGACAATGCACCTTTTATCACTGCCCCATCCAACACGTCCCACCGGCTGCTGACCCCCCAGACACGTCTTGGTGAGACAGTGAGCCAGGTGACAGCTGAGGACATTGACTCTGGTGTTAATGCTGAGCTGATCTATAGCATTGCTGGTGGCAACCCTTATGGACTCTTTCAGATTGGGTCACATTCAGGTGCCATCACCCTGGAGAAGGAGATTGAGCGGCGCCACCATGGGCTACACCGCCTTGTGGTGAAGGTCAGTGACCGTGGCAAACCACCACGCTATGGCACAGCCCTGGTCCACCTTTATGTCAATGAGACGCTAGCCAACCGCACACTGCTGGAGACCCTCCTGGGCCACAGCCTGGACACGCCCCTGGATATCGACATTGCTGGGGACCCAGAATACGAGCGCTCCAAGCAGCGTGGTAACATCCTCTTCGGTGTAGTGGCTGGTGTTGTGGCTGTGGCCTTGCTCATCGCCCTAGCAGTACTTGTGCGCTACTGCCGGCAGCGGGAGGCCAAGAGCGGCTACCAGGCTGGCAAGAAGGAGACCAAGGACCTGTATGCCCCCAAGCCCAGTGGCAAAGCCTCCAAGGGAAACAAAAGCAAGGGCAAGAAGAGCAAGTCCCCGAAGCCAGTGAAGCCAGTGGAGGATGAAGATGAGGCTGGGCTGCAGAAGTCCCTCAAGTTCAACCTGATGAGTGATGCACCTGGGGACAGTCCCCGAATCCACCTGCCCCTCAACTACCCACCCGGCAGCCCGGACCTGGGCCGCCACTACCGCTCTAACTCCCCTCTGCCTTCCATCCAGCTGCAGCCCCAGTCACCCTCAGCCTCCAAGAAGCACCAGGTGGTACAGGACCTGCCGCCTGCAAACACATTTGTGGGCACCGGGGACACCACGTCCACGGGCTCCGAGCAGTACTCCGACTACAGCTACCGCACCAACCCCCCAAAATACCCCAGCAAGCAGTTACCTCACCGCCGTGTCACCTTTTCGGCCACTAGCCAGGCCCAGGAGCTGCAGGACCCATCCCAGCACAGTTACTATGATAGCGGTCTGGAGGAGTCTGAGACACCATCCAGCAAGTCATCCTCGGGACCCCGACTTGGTCCTTTGGCCCTGCCTGAAGATCATTATGAACGCACCACCCCTGATGGCAGCATAGGAGAGATGGAGCACCCCGAGAATGACCTCCGCCCTTTGCCTGATGTCGCTATGACGGGCACATGTACCCGGGAGTGCAGTGAGTTTGGCCACTCTGACACATGCTGGATGCCTGGCCAGTCGTCTCCCAGTCGCCGGACCAAGAGCAACGCCCTCAAACTCTCCACCTTCGTGCCTTACCAGGACCGAGGAGGGCAGGAGCCTGCGGGCGCCGGCAGCCCCAGCCCCCCGGAAGACCGGAACACCAAAACGGCCCCCGTGCGCCTCCTGCCCTCCTACAGTGCCTTCTCCCACAGTAGCCATGATTCCTGCAAGGACTCGGCCACCTTGGAGGAAATCCCCCTGACCCAGACCTCGGACTTCCCACCTGCAGCCACACCGGCATCTGCCCAGACGGCCAAGCGCGAGATCTACCTGTGA
Pcdh1 PREDICTED: protocadherin-1 isoform X1 [Heterocephalus glaber]
Length: 1237 aa View alignments>XP_004854362.1 MDSEAGGRCSPEAALLILKPARMGLLRPSPGPGGQRLLLPPLMLALVLLLAPSAGQATRVVYKVPEEQPPNTLIGSLAADYGFPDVGHLYKLEVGAPYLRVEGKTGDIFTTETSIDREGLRECQNQLPGEPCILEFEVSITDLMQNGSPRLLEGQIEVQDINDNTPNFSSPVITLSIPENTNIGSLFPIPLATDRDAGPNGVASYELQAKPEAQELFGLQVAEDQEEKQPQLIVMGNLDRERRDSYDLNIKVQDGGSPPRASSALLRVTVLDTNDNAPKFERPSYEAELSENSPIGHSVIQVKANDSDQGANAEIDYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVLAKDRGANPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEETAVALVQVSDRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDINDNAPVFTQSITEVAFPENNKPGEVVAEVTATDADSGSNAELVYSLEPEPAAQGLFSISPENGEIRVKTSLDREQRDSYELKVVAADRGSPSLKGTATVLINVLDCNDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENARVQLSVEQDNGDFVIQNGTGTILSSLSFDREQQSIYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPFITAPSNTSHRLLTPQTRLGETVSQVTAEDIDSGVNAELIYSIAGGNPYGLFQIGSHSGAITLEKEIERRHHGLHRLVVKVSDRGKPPRYGTALVHLYVNETLANRTLLETLLGHSLDTPLDIDIAGDPEYERSKQRGNILFGVVAGVVAVALLIALAVLVRYCRQREAKSGYQAGKKETKDLYAPKPSGKASKGNKSKGKKSKSPKPVKPVEDEDEAGLQKSLKFNLMSDAPGDSPRIHLPLNYPPGSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQVVQDLPPANTFVGTGDTTSTGSEQYSDYSYRTNPPKYPSKQLPHRRVTFSATSQAQELQDPSQHSYYDSGLEESETPSSKSSSGPRLGPLALPEDHYERTTPDGSIGEMEHPENDLRPLPDVAMTGTCTRECSEFGHSDTCWMPGQSSPSRRTKSNALKLSTFVPYQDRGGQEPAGAGSPSPPEDRNTKTAPVRLLPSYSAFSHSSHDSCKDSATLEEIPLTQTSDFPPAATPASAQTAKREIYL