Sequence details NCBI ID: XM_004854266.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Itga9
Gene Name integrin, alpha 9
Entrez Gene ID 101717104

Database interlinks

Part of NW_004624773.1 (Scaffold)

For more information consult the page for NW_004624773.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ITGA9 ENSCPOG00000014650 (Guinea pig)

Gene Details

integrin, alpha 9

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013200, Guinea pig)

Protein Percentage 95.17%
CDS Percentage 93.73%
Ka/Ks Ratio 0.12231 (Ka = 0.0236, Ks = 0.1932)

ITGA9 ENSG00000144668 (Human)

Gene Details

integrin, alpha 9

External Links

Gene Match (Ensembl Protein ID: ENSP00000264741, Human)

Protein Percentage 92.02%
CDS Percentage 89.75%
Ka/Ks Ratio 0.11646 (Ka = 0.042, Ks = 0.3609)

Itga9 ENSMUSG00000039115 (Mouse)

Gene Details

integrin alpha 9

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000044227, Mouse)

Protein Percentage 90.47%
CDS Percentage 87.03%
Ka/Ks Ratio 0.0956 (Ka = 0.0504, Ks = 0.527)

Itga9 ENSRNOG00000043167 (Rat)

Gene Details

integrin alpha 9

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000015113, Rat)

Protein Percentage 88.81%
CDS Percentage 85.54%
Ka/Ks Ratio 0.1053 (Ka = 0.0631, Ks = 0.5994)

Genome Location

Sequence Coding sequence

Length: 3087 bp    Location: 20734995..20339123   Strand: -
Raw sequence   
>XM_004854266.1
ATGGGCGCCGGGGGGCTCTGCGTGCTGCTCCTGGCACTGGTGGCCGCGGGGACCCCGGCGGGCTCCTACAACCTCGACCCGCAGCTCCCTGTGCGCTTCCAGGGCCCCGCCGGCTCCTTCTTCGGCTACGCGGTGCTGGAGCATTTCCACGACAACACGCGCTGGGTCCTCGTGGGTGCACCAAAGGCAGATTCCAAATACAGCACTTCAGTTAAGTCCCCTGGGGCTGTGTTTAAGTGCCGTGTACATACCAACCCTGACCGGAGATGCACCGAACTGGACATGGCTCGAGGGAAGAATCGGGGTACGTCCTGTGGAAAGACCTGTCGAGAAGACCGGGATGATGAGTGGATGGGGGTGAGCCTGGCCCGGCAGCCCGGTGTGGATGGCCGAGTGTTGGCCTGTGCCCACCGATGGAAGAACATCTACTATGAAACAGATCATATCTTACCTCATGGCTTCTGTTACATCATCCCACCCAACCTCCAGGCCAAAGGCAGGACGCTGATCCCTTGCTATGAAGAGTACAAGAAGAAGTATGGCGAGGAACATGGCTCCTGCCAGGCGGGGATAGCAGGCTTCTTCACTGAGGAGCTGGTGGTGATGGGTGCTCCAGGGTCATTCTATTGGGCTGGGACTGTCAAAGTGCTGAACCTCACAGACAACACCTATTTTAAACTGAACGATGAAGCAATCATGAATAGGAGGTATACCTACCTGGGTTACTCAGTGACCGCTGGCCACTTCTCTCACCCATCCAGCACTGACGTGGTTGGAGGTGCCCCCCAGGATGAAGGCATCGGAAAGGTTTATATATTCAGAGCTGACCGAAGATCAGGCACATTAATTAAGATTTTTCAGGCATCAGGTAAAAAGATGGGCTCTTACTTCGGCTCCTCCTTATGCGCAGTTGACCTGAACAGGGATGGCCTTTCTGACCTGCTAGTGGGTGCCCCCATGTTTTCTGAGATCAGAGATGAGGGGCAGGTCACTGTATACATCAACAGAGGAAACGGAGCCCTTGAGGAGCAGCTTGCCCTGACTGGGGATAGGGCCTACAATGCGCACTTTGGGGAGAGCATCGCCAGCCTGGGGGATCTTGACAATGATGGCTTCTCAGATGTGGCCATTGGTGCACCTGAAGAGGACGACTTTGCGGGGGCAGTCTATATCTATCATGGCGATGCCGGTGGGGTGGTCCCCCAGTACTCAATGAAATTGTCTGGGCGGAGGATAAACCCAGTCCTGCGGATGTTCGGGCAGTCCATATCAGGAGGCATTGATATGGATGGAAATGGCTATCCTGATGTCACCATTGGTGCCTTCATGTCCAACAGCGTGGTTCTTCTAAGGGCCAGAGCTGTCATTACGGTGGATGTCTCCATCTTCCTCCCAGCCTCCATCAACATCACAGCACCTCAGTGTCATGATGGACAGCAGCCTATAAACTGCCTGAATGTCACTGTCTGCTTTAGGTTCCATGGCAAACATGTTCCAGGAGAAATCGGCCTGAACTACGTTCTTACAGCTGATGTGGCCAAAAAGGAGAAGGGCCAGCTGCCTAGGGTCTACTTTGTGTTGCTGGGAGAGACTGTTGGCCAGGTCTTGGAGAAGCTGCAGCTGGCCCACATGGAGGAGCTGTGTCATCACTACGTGGCCCACGTGAAGCGGAGGGTGCAGGATGTCATCAGCCCCATCGTGTTTGAAGCTGCCTACAGCCTTGGAACACATGTGACTGGTGAGGAGGAGAGAGAGCTGCCAGCTCTGACACCAGTTCTACGCTGGAAGAAGGGACAAAAGATTGCCCAAAAGAATCTGACTGTCTTTGAAAGAAATTGCCAATCTGAGGATTGTGCCGCTGACCTGCAGCTTCGGGGTAAACTGTTGCTCTCCAGTATTGATGAGAAAACCCCCTATCTAGCTTTGGGAGCTGTGAAGAATATCTCCCTAAACATCTCCATTTCCAACCTTGGGGACGATGCGTATGATGCCAATGTATCCTTCAATGTGTCCCGGGAGCTCTTCTTCATCAACATGTGGCAGAAGGAGGAAATGGGCATCTCCTGTGAGCTGTTGGAATCAGACTTCCTCAAATGCAGCGTGGGATTTCCTTTCATGAGGTCAAAGTCGAAGTATGATTTCAGCGTAATCTTTGATACAAGCCACCTGTCTGGGGAAGAGGAAGTTCTCAGCTTCATCATTACAGCTCAGAGTGGCAATGTGGAGCGATCTGAAGCCCTGCTTGACAACACTCTCATACTGACGGTGCCTCTGGTGCATGAAGTGGACACATCCATCACTGGAATTGTGTCTCCGACTTCATTTGTGTATGGTGAGTCTGTGGATGCATCCAACTTCATTCAGCTGGATGACCTGGAGTGTCATTTTCAACCCCTCAACCTAACCATTCAGGTCTATAACACTGGCCCGAGCACCCTTCCTGGATCATCTGTCAGCATTTCATTCCCTAACCGACTGTCACCTGGTGGTGCGGAGATGTTTCAGGTCCAGAAGATGGTGGTGGGCCAGGAGAAGGGAAACTGCTCGTTCCAGAAAAACCCAACCCCCTGCATCATCCCTCAAGAACAAGAAAATATCTTCCACACCATCTTTGCTTTTTTCACAAAGTCTGGAAGAAAAGTCTTGGACTGTGAAAATCCAGGAATGTCTTGCCTAGCAATACACTGTAACCTTAGTGCTCTCACTAAAGAAGAAAGTCGTACAATAGATGTTTACATGCTGCTGAACACAGAAATATTGAAGGAGGACAGTTCATCTGTCATCCAGTTCATGGCTCGAGCCAAGGTGAAGGTGGACCCTGCCCTGCAGGTGGTGGAAATAGCCAATGGGAACCCAGAAGAAATGACGGTGGTCTTTGAGGCCTTGCACAATCTGGAGCCCCGAGGCTATGTTGTGGGATGGATCATCGCCATAAGTTTGCTGGTGGGAATCCTCATCTTCCTGCTGCTAGCAGTGCTTCTGTGGAAGATGGGCTTCTTTCGCCGAAGGTACAAAGAAATTATTGAAGCTGAGAAGAACCGGAAAGAGAATGAAGAGAGTTGGGACTGGGTCCAGAAAAACCAGTGA

Related Sequences

XP_004854323.1 Protein

Itga9 PREDICTED: integrin alpha-9 [Heterocephalus glaber]

Length: 1028 aa      View alignments
>XP_004854323.1
MGAGGLCVLLLALVAAGTPAGSYNLDPQLPVRFQGPAGSFFGYAVLEHFHDNTRWVLVGAPKADSKYSTSVKSPGAVFKCRVHTNPDRRCTELDMARGKNRGTSCGKTCREDRDDEWMGVSLARQPGVDGRVLACAHRWKNIYYETDHILPHGFCYIIPPNLQAKGRTLIPCYEEYKKKYGEEHGSCQAGIAGFFTEELVVMGAPGSFYWAGTVKVLNLTDNTYFKLNDEAIMNRRYTYLGYSVTAGHFSHPSSTDVVGGAPQDEGIGKVYIFRADRRSGTLIKIFQASGKKMGSYFGSSLCAVDLNRDGLSDLLVGAPMFSEIRDEGQVTVYINRGNGALEEQLALTGDRAYNAHFGESIASLGDLDNDGFSDVAIGAPEEDDFAGAVYIYHGDAGGVVPQYSMKLSGRRINPVLRMFGQSISGGIDMDGNGYPDVTIGAFMSNSVVLLRARAVITVDVSIFLPASINITAPQCHDGQQPINCLNVTVCFRFHGKHVPGEIGLNYVLTADVAKKEKGQLPRVYFVLLGETVGQVLEKLQLAHMEELCHHYVAHVKRRVQDVISPIVFEAAYSLGTHVTGEEERELPALTPVLRWKKGQKIAQKNLTVFERNCQSEDCAADLQLRGKLLLSSIDEKTPYLALGAVKNISLNISISNLGDDAYDANVSFNVSRELFFINMWQKEEMGISCELLESDFLKCSVGFPFMRSKSKYDFSVIFDTSHLSGEEEVLSFIITAQSGNVERSEALLDNTLILTVPLVHEVDTSITGIVSPTSFVYGESVDASNFIQLDDLECHFQPLNLTIQVYNTGPSTLPGSSVSISFPNRLSPGGAEMFQVQKMVVGQEKGNCSFQKNPTPCIIPQEQENIFHTIFAFFTKSGRKVLDCENPGMSCLAIHCNLSALTKEESRTIDVYMLLNTEILKEDSSSVIQFMARAKVKVDPALQVVEIANGNPEEMTVVFEALHNLEPRGYVVGWIIAISLLVGILIFLLLAVLLWKMGFFRRRYKEIIEAEKNRKENEESWDWVQKNQ