Sequence details NCBI ID: XM_004854265.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ctdspl
Gene Name CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like, transcript variant X4
Entrez Gene ID 101716067

Database interlinks

Part of NW_004624773.1 (Scaffold)

For more information consult the page for NW_004624773.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CTDSPL ENSCPOG00000000592 (Guinea pig)

Gene Details

CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000521, Guinea pig)

Protein Percentage 99.16%
CDS Percentage 95.68%
Ka/Ks Ratio 0.02063 (Ka = 0.0038, Ks = 0.1835)

CTDSPL ENSG00000144677 (Human)

Gene Details

CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like

External Links

Gene Match (Ensembl Protein ID: ENSP00000273179, Human)

Protein Percentage 99.25%
CDS Percentage 94.21%
Ka/Ks Ratio 0.02057 (Ka = 0.0052, Ks = 0.2529)

Ctdspl ENSMUSG00000047409 (Mouse)

Gene Details

CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000072852, Mouse)

Protein Percentage 96.6%
CDS Percentage 89.31%
Ka/Ks Ratio 0.03063 (Ka = 0.0161, Ks = 0.5261)

Genome Location

Sequence Coding sequence

Length: 798 bp    Location: 20290966..20155453   Strand: -
Raw sequence   
>XM_004854265.1
ATGGACGGCCCAGCTATCATCACCCAGGTGACCAACCCCAAGGAGGACGAGGGCCGTGCGCCTGGCGCGGGCGAAAAAGCTTCCCAGTGCAATGTCAGCTTAAAGAAGCAGAGAAGCCGCAGCATCCTTAGTTCCTTCTTCTGCTGCTTTCGGGATTATAATGTGGAGGCCCCTCCATCCAGCAGTCCCAGTGTGCTTCCGCCACTGGTGGAGGAGAATGGTGGGCTTCAGAAGCCACCAGCTAAATACCTCCTTCCAGAGGTGACGGTGCTTGACTATGGAAAGAAATGTGTGGTCATTGATTTGGATGAAACTCTTGTGCACAGTTCATTTAAGCCTATTAGTAATGCTGATTTTATTGTTCCGGTTGAAATCGATGGAACTATACATCAGGTGTATGTGCTGAAGCGGCCACATGTGGATGAGTTCCTCCAAAGGATGGGACAGCTCTTCGAGTGTGTGCTCTTTACTGCCAGCTTGGCTAAGTATGCAGACCCTGTGGCTGACCTTCTAGACCGCTGGGGTGTGTTCCGGGCCCGACTCTTCAGAGAATCCTGTGTTTTCCATCGAGGAAACTACGTCAAGGACCTGAGTCGCTTAGGACGGGAGCTGAGCAAAGTGATCATTGTTGACAATTCTCCTGCCTCGTACATCTTCCATCCTGAGAATGCAGTGCCTGTGCAGTCCTGGTTCGATGACATGACAGACACGGAGCTGCTGGACCTCATCCCCTTCTTTGAGGGGCTGAGTCGTGAGGACGACGTGTACAGCATGCTGCACAGACTCTGCAATAGGTAG

Related Sequences

XP_004854322.1 Protein

Ctdspl PREDICTED: CTD small phosphatase-like protein isoform X4 [Heterocephalus glaber]

Length: 265 aa      View alignments
>XP_004854322.1
MDGPAIITQVTNPKEDEGRAPGAGEKASQCNVSLKKQRSRSILSSFFCCFRDYNVEAPPSSSPSVLPPLVEENGGLQKPPAKYLLPEVTVLDYGKKCVVIDLDETLVHSSFKPISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMGQLFECVLFTASLAKYADPVADLLDRWGVFRARLFRESCVFHRGNYVKDLSRLGRELSKVIIVDNSPASYIFHPENAVPVQSWFDDMTDTELLDLIPFFEGLSREDDVYSMLHRLCNR