Sequence details NCBI ID: XM_004854232.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Setmar
Gene Name SET domain and mariner transposase fusion gene
Entrez Gene ID 101704237

Database interlinks

Part of NW_004624773.1 (Scaffold)

For more information consult the page for NW_004624773.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ENSCPOG00000019854 (Guinea pig)

Gene Details

Uncharacterized protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000021158, Guinea pig)

Protein Percentage 87.67%
CDS Percentage 90.33%
Ka/Ks Ratio 0.23849 (Ka = 0.0631, Ks = 0.2646)

Setmar ENSMUSG00000034639 (Mouse)

Gene Details

SET domain without mariner transposase fusion

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000048225, Mouse)

Protein Percentage 79.66%
CDS Percentage 79.89%
Ka/Ks Ratio 0.19656 (Ka = 0.1333, Ks = 0.6783)

Setmar ENSRNOG00000006806 (Rat)

Gene Details

SET domain without mariner transposase fusion (Setmar), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000008892, Rat)

Protein Percentage 77.08%
CDS Percentage 80.4%
Ka/Ks Ratio 0.22693 (Ka = 0.1382, Ks = 0.6089)

Genome Location

Sequence Coding sequence

Length: 906 bp    Location: 14680573..14691971   Strand: +
Raw sequence   
>XM_004854232.1
ATGGCAGCCTGTGAGGAGGAGTTTGAAGTCCCGACAGAAGAGCTGGATGTAGCTCAAGGCCATGAGAACTTTCCAGTTAGCGCCTGGCCCCCGGGGGCGGAACCAGAGCCCTTCCAGTATACCCCTGATCATGTAGTTGGACCTGGAGCAGACATTGATCCCTCTCAAATTACCTTTCCTGGATGCGTTTGTGTCAAAACTCCCTGTCTCCCTGGAAGTTGCTCCTGTCTCCACTATGAAGAGACGTATGATGACAATTTGTGCCTTAGAGATACAGGATCAGAAGCACAGTATGCCAAACCTATTTTTGAATGCAATGTCCTGTGCCAGTGTGGTGACAACTGCAGAAACAGAGTGGTTCAGAGGGGTCTCCAGTTTGACCTCCAGGTGTTCAAGACAGATAAAAAAGGCTGGGGACTTCGTACTTTGGAACTTATATCGAAAGGAAAGTTTGTCTGTGAATATGCTGGTGAAGTGTTAGGATTCTCTGAAGTACAGAGAAGAATTCACTTACAAACAACAAATGACTCAAATTACATTATAGCCATCAGGGAACATATTTATAATGGACAGATACTGGAAACATTTGTTGATCCTACCTATATAGGAAATATTGGAAGATTCCTTAATCATTCTTGTGAGCCAAACCTGTTGATGGTTCCTACTCGAATTGACTCAATGGTTCCTAAGTTAGCACTTTTTGCAGCTAAAGACATTTTGCCAGGTGAAGAACTCTCTTATGACTATTCAGGAAGATTTCTTAATCTAATGGACAGTGAAGACACAGAAAAGACAGATAATAAGAAATTAAGAAAACCTTGTTACTGTGGTGCCAAATCATGTACTGGTTTCTTGCCTTATGACAGTTCATTGTACTGCCCCTTACAAAAGCCAGATATCAATTAG

Related Sequences

XP_004854289.1 Protein

Setmar PREDICTED: histone-lysine N-methyltransferase SETMAR-like [Heterocephalus glaber]

Length: 301 aa      
>XP_004854289.1
MAACEEEFEVPTEELDVAQGHENFPVSAWPPGAEPEPFQYTPDHVVGPGADIDPSQITFPGCVCVKTPCLPGSCSCLHYEETYDDNLCLRDTGSEAQYAKPIFECNVLCQCGDNCRNRVVQRGLQFDLQVFKTDKKGWGLRTLELISKGKFVCEYAGEVLGFSEVQRRIHLQTTNDSNYIIAIREHIYNGQILETFVDPTYIGNIGRFLNHSCEPNLLMVPTRIDSMVPKLALFAAKDILPGEELSYDYSGRFLNLMDSEDTEKTDNKKLRKPCYCGAKSCTGFLPYDSSLYCPLQKPDIN