Sequence details NCBI ID: XM_004854215.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Pdzrn3
Gene Name PDZ domain containing ring finger 3
Entrez Gene ID 101696410

Database interlinks

Part of NW_004624773.1 (Scaffold)

For more information consult the page for NW_004624773.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ENSCPOG00000001583 (Guinea pig)

Gene Details

Uncharacterized protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001430, Guinea pig)

Protein Percentage 97.0%
CDS Percentage 94.03%
Ka/Ks Ratio 0.03878 (Ka = 0.0129, Ks = 0.3327)

Genome Location

Sequence Coding sequence

Length: 3210 bp    Location: 8144028..7901596   Strand: -
Raw sequence   
>XM_004854215.1
ATGGGATTCGAGCTGGACCGCTTCGACGGCGATGTGGACCCGGACCTGAAGTGTGCGCTCTGCCACAAGGTCCTGGAGGACCCGCTGACCACTCCGTGCGGCCACGTCTTCTGCGCCGGCTGCGTGCTGCCCTGGGTGGTGCAGGAGGGCAGCTGCCCATCGCGCTGCCGCGGCCGCCTGTCGGCCAAGGAGCTCAACCACGTCCTGCCGCTCAAGCGCCTCATCCTCAAGCTGGACATCAAGTGCGCGCACGCCGCGCGCGGCTGCAGCCGGGTGGTCAAGCTGCAGGAGCTGCCCGAGCACCTCGAGCGCTGCGACTTCGCGCCCGCGCGCTGCCGCCACGCGGGCTGCGGCCAGGTGCTGCTGCGGCGCGACGTGGAGGCACACATGCGCGACGCCTGCGACGCGCGGCCCGTGGGCCGCTGCCAGGAGGGCTGCGGGCTGCCCCTGACTCAAGGCGAGCAGCGCTCCGGCGGCCACTGCTGCGCGCGGGCGTTGCGGGCGCACAACGGCGCGCTACAGGCCCGTCTGGGCGCGCTGCACAAGGCGCTCAAGAAGGAGGCGCTGCGCGCAGGGAAGCGCGAGAAGTCGCTGGTGGCGCAGCTGGCCGCCGCGCAGCTGGAGCTGCAGATGACCGCTCTGCGCTACCAGAAGAAGTTCACCGAGTACAGCGCGCGCCTAGACTCACTCAGCCGCTGCGTGGCCGCGCAGCCGGGCAGCAGCAAGGGTGAAGAAACCAAAAGCCTGACCCTTGTCCTGCATCGGGATTCTGGTTCCCTGGGATTCAATATTATTGGTGGCCGGCCGTGTGTGGACAATCAAGATGGATCATCCAGTGAAGGAATCTTTGTATCCAAAATAGTTGACAGTGGGCCCGCAGCCAAGGAAGGAGGCCTGCAAATTCATGACAGGATTATTGAGGTCAACGGCAAAGACTTATCCAGAGCAACTCATGACCAGGCTGTGGAAGCTTTTAAAACAGCTAAGGAGCCCATTGTAGTACAGGTATTGAGGAGAACGCCTCGGACCAAAATGTTCACCCCTCCTGCGGAGTTGCAGTTGGTGGACACAGGCACCCAGACCGACATCACCTTTGAGCACATCATGGCCTTGACAAAGATGTCCTCTCCCAACTCGCCTGTGCTAGACCCCTACCTCCTGCCAGAGGAGCATCCCTCAGCCCATGAGTACTACGATCCAAATGACTACATGGCGGACATCCATCAGGAGATGGACAGGGAGGAGCTGGAGCTGGAGGAAGTGGATCTCTACAGACTAAGCAGCCAAGACAAGCTGGGCCTCACTGTGTGCTACCGGACAGATGACGAAGATGACATTGGGATTTATATAAGTGAGATTGACCCTAACAGCATTGCAGCCAAGGACGGGCGCATTCGGGAAGGAGACCGCATCATCCAGATTAATGGCATAGAGGTCCAGAACCGTGAAGAAGCTGTGGCTCTTTTGACAAGTGAAGAAAATAAGAACTTTTCACTGCTGATTGCAAGGCCTGAACTCCAGCTGGATGAGGGCTGGATGGACGACGACAGGAATGACTTTCTCGATGACCTGCACATGGACATGCTAGAGGAACAGCACCACCAGGCCATGCAGTTCACGGCCAGTGTGCTCCAGCAGAAGAAACATGAGGAAGATGGTGGGACCACAGACACAGCCACCATCCTGTCCAACCAACACGAGAAGGACAGCGGCGTGGGGCGGACCGATGAGAGCACCCGCAATGAGGAGAGCTCTGAGCAGGAGAACAACGGGGACGACGCCACTGCGTCCTCCAACCCGCTGGCGGGCCAGAGGAAGCTCACGTGCAGCCAAGACACACTGGGCAGCGGAGACGTGCCCTTCAGCAACGAGTCTTTTGTCTCCGCTGACTGCACCGAAGTGGACTACCTGGGCATTCCGGTGGATGAGTGCGAGCGCTTCCGTGAGCTGCTGGAGCTCAAGTGCCAGGTGAAGAGCGCCAGCCCCTACAGCCTCTACTATCCCAGCAGCCCCCTGGACGCTACCAAGAGCGACCCCGAGAGCGTGGACAAGGAGCTGGAGCTGCTGAACGAGGAGCTGCGCAGTATCGAACTGGAGTGCCTGAGCATCGTGCGCGCGCACAAGATGCAGCAGCTCAAGGAGCAGTACCGCGAGCCCTGGCTGCTGCACCACGGTGGCTTCCGCAACTACAACACTAGCCTCGACGTGCGCCGCCACGAGCTGTCCGACATCACCGAGCTGCCGGAGAAGTCCGACAAGGACAGCTCGAGCGCCTACAACACCGGCGAGAGCTGCCGGAGCACCCCGCTCACCCTGGAGATCTCCCCTGACAACTCCTTGCGGAGGGCGGCGGAGGGCCTCAGCTGCTCCGGCAGCGAAGGGGCTGGGGCCATGGGGACCGCCGAGGGTTACGGGCCATCCCCTAAGAACCTGCTCGCCATCACTGAAGACCCCGAGGTCGGTACCCCAAACTACAACCCTTCAGCCAAAGAGCTGGACCCCAGCCAACCCCTGGAGAGCAAAGAGCGCAGAGCCACTGAGGGCGGCAGGAGCCCCTTGGGCAGCCCGAAGCTGGGCGGTGCTTACCTGTCGTCCTCCCCGCACTCCCCGTACAAGCACGCGCACATCCCGGCCCATGCGCAGCACTACCAGAGCTACATGCAGCTGATCCAGCAGAAGTCCGCCGTGGAGTACGCGCAGAGCCAGATGAGCCTGGTGAGCATGTGCAAGGACCTGGCCTCTTCCAACTCCTCGGAGCCCAGGATGGAGTGGAAGGTGAAGATCCGCAGCGACGGGACGCGCTACATCACCAAAAGGCCGGTGCGCGACCGCCTGCTGAGGGAACGCGCCCTCAAGATCCGCGAGGAGCGCAGCGGCATGACCACGGACGACGACGCTGTGAGCGAGCTGAAGATGGGGCGCTACTGGAGCAAGGAGGAGCGCAAGCAGCACCTGGTGAAGGCCAAGGAGCAGAGGCGCAGGCGCGAGTTCATGATGCAGAGCAGGTTAGATTGTCTGAAGGAGCAGCAGGGGGCCGACGACAGGAAGGAGATGAATATCCTGGAACTGAGCCACAAAAAGATGATGAAGAAGAGGAATAAAAAGATCTTTGATAATTGGATGACTATTCAAGAACTCTTAACGCACGGCACAAAATCCCCAGACGGCACTAGAGTATACAATTCCTTCTTATCGGTGACTACTGTATAA

Related Sequences

XP_004854272.1 Protein

Pdzrn3 PREDICTED: E3 ubiquitin-protein ligase PDZRN3 [Heterocephalus glaber]

Length: 1069 aa      
>XP_004854272.1
MGFELDRFDGDVDPDLKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGSCPSRCRGRLSAKELNHVLPLKRLILKLDIKCAHAARGCSRVVKLQELPEHLERCDFAPARCRHAGCGQVLLRRDVEAHMRDACDARPVGRCQEGCGLPLTQGEQRSGGHCCARALRAHNGALQARLGALHKALKKEALRAGKREKSLVAQLAAAQLELQMTALRYQKKFTEYSARLDSLSRCVAAQPGSSKGEETKSLTLVLHRDSGSLGFNIIGGRPCVDNQDGSSSEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGKDLSRATHDQAVEAFKTAKEPIVVQVLRRTPRTKMFTPPAELQLVDTGTQTDITFEHIMALTKMSSPNSPVLDPYLLPEEHPSAHEYYDPNDYMADIHQEMDREELELEEVDLYRLSSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQNREEAVALLTSEENKNFSLLIARPELQLDEGWMDDDRNDFLDDLHMDMLEEQHHQAMQFTASVLQQKKHEEDGGTTDTATILSNQHEKDSGVGRTDESTRNEESSEQENNGDDATASSNPLAGQRKLTCSQDTLGSGDVPFSNESFVSADCTEVDYLGIPVDECERFRELLELKCQVKSASPYSLYYPSSPLDATKSDPESVDKELELLNEELRSIELECLSIVRAHKMQQLKEQYREPWLLHHGGFRNYNTSLDVRRHELSDITELPEKSDKDSSSAYNTGESCRSTPLTLEISPDNSLRRAAEGLSCSGSEGAGAMGTAEGYGPSPKNLLAITEDPEVGTPNYNPSAKELDPSQPLESKERRATEGGRSPLGSPKLGGAYLSSSPHSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQMSLVSMCKDLASSNSSEPRMEWKVKIRSDGTRYITKRPVRDRLLRERALKIREERSGMTTDDDAVSELKMGRYWSKEERKQHLVKAKEQRRRREFMMQSRLDCLKEQQGADDRKEMNILELSHKKMMKKRNKKIFDNWMTIQELLTHGTKSPDGTRVYNSFLSVTTV