Details from NCBI annotation

Gene Symbol Lrig1
Gene Name leucine-rich repeats and immunoglobulin-like domains 1, transcript variant X3
Entrez Gene ID 101712761

Database interlinks

Part of NW_004624773.1 (Scaffold)

For more information consult the page for NW_004624773.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LRIG1 ENSCPOG00000002275 (Guinea pig)

Gene Details

leucine-rich repeats and immunoglobulin-like domains 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002066, Guinea pig)

Protein Percentage 93.37%
CDS Percentage 92.07%
Ka/Ks Ratio 0.14381 (Ka = 0.0343, Ks = 0.2385)

LRIG1 ENSG00000144749 (Human)

Gene Details

leucine-rich repeats and immunoglobulin-like domains 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000273261, Human)

Protein Percentage 86.28%
CDS Percentage 85.89%
Ka/Ks Ratio 0.15323 (Ka = 0.0733, Ks = 0.4784)

Lrig1 ENSMUSG00000030029 (Mouse)

Gene Details

leucine-rich repeats and immunoglobulin-like domains 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000098686, Mouse)

Protein Percentage 84.28%
CDS Percentage 83.57%
Ka/Ks Ratio 0.16168 (Ka = 0.0918, Ks = 0.5679)

Lrig1 ENSRNOG00000012952 (Rat)

Gene Details

Protein Lrig1

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000017384, Rat)

Protein Percentage 86.0%
CDS Percentage 83.63%
Ka/Ks Ratio 0.13481 (Ka = 0.0825, Ks = 0.6118)

Genome Location

Sequence Coding sequence

Length: 3135 bp    Location: 850088..712211   Strand: -
>XM_004854173.1
ATGGCGCGGCCGGCCGGGGAAGCGCCTGGGGCCCCGCACCGCGCGCCCTGCCTACTCCTGCTCTGGCTGCTGCTGCTGCTGCTTGGGCCGGAGACGGAGACTGCTGAGCCCGGCACGCGGCCCCCCTGCGCGGCCGCCTGCACTTGCGCCAGGGACGCGCTGGACTGCGCCGGGCGCGGGCTGACCGCAGTGCCTGGGGACCTGCCCGCCTGGACACGGAGCCTGAATCTGAGTTACAACAAACTGTCTGAGATTGACCCTGCTGGTTTTGAGGATTTGCCAAATCTACAGGAAGTGTACCTCAATAACAATGAGTTGACAGCAATACCATCCCTGGGTGCTGCTTCAACGCATGTCATCTCTCTCTTTCTGCAGCACAATAAGATTCGAAGTTTGGAGGGGAGTCATCTGAAGGCATACCTGTCAGTGGAAGTGTTGGATCTGAGTTCAAACAACATCACAGAAATCCGGAGCACCTGCTTTCCACATGGACTGCGCATAAGAGAGCTCAATCTGGCAAGCAACCGCATCGGCACCCTGGAGTTGGGAGCATTTGATGGTCTGTCACGGTCGCTCCTTACTCTTCGTCTGAGCAAAAACAGGATCACCCAGCTTCCTGTAAAAGCATTCAAGTTACCCAGGCTGACACAACTGGACCTCAACCGGAATCGGATTCGGCTCATCGAGGGCCTCACATTCCAGGGGCTCGACAGCTTGGAGGTGCTAAAGCTTCAGCGGAACAACATCAGCAAGCTGACTGATGGTGCCTTCTGGGGGCTATCCAAGATGCATGTGCTGCATCTGGAGTACAATAGTCTGGTGGAGGTAAACAGCGGCTCACTATATGGCCTCACAGCCTTGCACCAGCTACACCTCAGCAACAATGCCATCTCTCGCATTCACCGTGATGGCTGGAGCTTCTGTCAGAAGCTGCACGAGCTGATTCTGTCCTTCAACAACCTCACACGTCTGGATGAAGAGAGCCTGGCCGAGCTGAGCATCCTGAGCATCCTGCGGCTTAGCCACAATGCCATCAGCCACATCGCCGAAGGCGCCTTCAAGGGACTCAGAAACCTGCGTGTCCTGGATCTGGACCACAATGAGATTTCAGGCACAATAGAGGATACTAGTGGTGCCTTTGCCGGGCTCGACAACCTCAGCAAGCTGACTCTGTTTGGAAACAAGATCAAGTCTGTGGCTAAGAGAGCATTCTCGGGGCTGGAAGGCCTGGAGCACCTAAACCTGGGAGAGAATGCCATTAGGTCTATCCAGTTGGATGCCTTTGTAAAGATGAAGAATCTTAAAGAGCTCCACATCAACAGTGAGAGCTTCCTGTGTGACTGCCAGCTGAAGTGGCTGCCCCCGTGGCTAGTGAGCAAGACACTGCAGGCCTTTGTGACAGCCACTTGTGCCCACCCAGAGTCACTGAAGGGCCAGAGCATTTTCTCAGTACCGCCAGAAGGTTTTGTATGTGATGATTTCCCAAAGCCACAGATCATCACCCAGCCAGAGACAACCATAGCTGTGGTGGGCAAGGACATCCGGTTCATGTGCTCAGCAGCCAGCAGCAGCAGCTCCCCTATGACCTTTGCTTGGAAGAAGGACAGTGAGGTCCTGGCCAACGCTGACATGGAGAACTTTGCCCATGTCCGTGCTCAGGATGGAGAGGTGATGGAGTACACCACCATCCTGCACCTCCGTCATATCACTTTTGGGCATGAGGGCCGCTACCAGTGTGTCATCACAAACCACTTTGGCTCCACCTACTCGCAGAAAGCCAGGCTCACTGTGAATGTGTTGCCATCATTCACTAAAATGCCCTACGACATCGCCATCCGGACTGGTACCATGGCCCGCCTCGAGTGTGCTGCCACTGGCCACCCTAACCCCCAGATTGCCTGGCAGAAAGATGGAGGCACAGACTTCCCTGCTGCGCGTGAGCGACGTATGCATGTCATGCCAGATGATGATGTGTTTTTCATCACTGATGTGAAAATAGACGACTCGGGGGTTTACAGCTGCACTGCCCAGAATTCAGCTGGCTCCATTTCAGCAAACGCCACCCTGACTGTCTTAGAAACTCCATCCTTGGCAGTGCCCTTAGAAGACCGCGTGGTGTCTCTGGGAGAAACGGTGGCGCTGCAGTGCAAAGCAACTGGGAGCCCCGCACCTCGAATCACCTGGTTCAAGGGTGACCGTCCACTGAGCCTCACTGAGCGGCACCACTTCACACCCGGCAACCAGCTACTGGTTGTTCAGAATGTGGTGGCAGAAGACGCGGGCCGCTACACATGTGAGATGTCCAACACCCTGGGCACAGAGCGTGCGCATAGCCAGCTGAGCATATTGCCTGCCCCTGGCTGTAGGAAGGATGGGACCACGGTGGGCATCTTCACCATCGCTGTGGTGTGCAGCATTGTCCTGACATCTCTGGTCTGGGTGTGCATCATCTACCAGACCAGGAGGAAGAGCGAGGAGTACAGTGTCACCAATACAGATGAAACCATTGTGCCACCAGATGTTCCAAGCTATCTCTCTTCTCAGGGGACTCTTTCTGACCGGCAGGAGACTGTGGTCAGGACAGAGGGTGGCCATCAGGCCAGCAAACACAGTGAAAGCAATGAACACAATGGCCCTGTTATATGTAGTGACTGCAACAGTGATATGGACAGTTATTCCAAGGAACACGTCTTCTATCATCAGCCTGTGTCCAAAGACAGTGCACAGCCAAGTACAGCAGGTGGCCAGGAGCCCAGTCAGAATCATCGAGAACATTCTTCAAAGCACCCTCACAGTGGGACTATTGAGGGGTCCTGCACTGACTGCAGGGGTTCCCTGTACCCCAGTAATCACGATAGAATGTTGCCATCCTTGCAGAAAAAGCCAGTGGCATCTCTAGATGGAAAAGGGGATTCATCTTGGACTTTAGCAAGATTGTATGAATCAGACTCCATAAACCAAGAGCCTCCATCTACATTAACTTCAGGCAACCCAGAACTCCCAGAAGCCCAGCACTTGCTTGTTTCTAATGGCCATCTCCCCACAGCATGTGGCTCTGGTCCTGAGTCCACACCGCTTACAGGACAGCTCCCCAGGAAGTGGAGGGGACCACTGCTGTTGGCACCAAAAAGCTAA

Related Sequences

XP_004854230.1 Protein

Lrig1 PREDICTED: leucine-rich repeats and immunoglobulin-like domains protein 1 isoform X3 [Heterocephalus glaber]

Length: 1044 aa      View alignments
>XP_004854230.1
MARPAGEAPGAPHRAPCLLLLWLLLLLLGPETETAEPGTRPPCAAACTCARDALDCAGRGLTAVPGDLPAWTRSLNLSYNKLSEIDPAGFEDLPNLQEVYLNNNELTAIPSLGAASTHVISLFLQHNKIRSLEGSHLKAYLSVEVLDLSSNNITEIRSTCFPHGLRIRELNLASNRIGTLELGAFDGLSRSLLTLRLSKNRITQLPVKAFKLPRLTQLDLNRNRIRLIEGLTFQGLDSLEVLKLQRNNISKLTDGAFWGLSKMHVLHLEYNSLVEVNSGSLYGLTALHQLHLSNNAISRIHRDGWSFCQKLHELILSFNNLTRLDEESLAELSILSILRLSHNAISHIAEGAFKGLRNLRVLDLDHNEISGTIEDTSGAFAGLDNLSKLTLFGNKIKSVAKRAFSGLEGLEHLNLGENAIRSIQLDAFVKMKNLKELHINSESFLCDCQLKWLPPWLVSKTLQAFVTATCAHPESLKGQSIFSVPPEGFVCDDFPKPQIITQPETTIAVVGKDIRFMCSAASSSSSPMTFAWKKDSEVLANADMENFAHVRAQDGEVMEYTTILHLRHITFGHEGRYQCVITNHFGSTYSQKARLTVNVLPSFTKMPYDIAIRTGTMARLECAATGHPNPQIAWQKDGGTDFPAARERRMHVMPDDDVFFITDVKIDDSGVYSCTAQNSAGSISANATLTVLETPSLAVPLEDRVVSLGETVALQCKATGSPAPRITWFKGDRPLSLTERHHFTPGNQLLVVQNVVAEDAGRYTCEMSNTLGTERAHSQLSILPAPGCRKDGTTVGIFTIAVVCSIVLTSLVWVCIIYQTRRKSEEYSVTNTDETIVPPDVPSYLSSQGTLSDRQETVVRTEGGHQASKHSESNEHNGPVICSDCNSDMDSYSKEHVFYHQPVSKDSAQPSTAGGQEPSQNHREHSSKHPHSGTIEGSCTDCRGSLYPSNHDRMLPSLQKKPVASLDGKGDSSWTLARLYESDSINQEPPSTLTSGNPELPEAQHLLVSNGHLPTACGSGPESTPLTGQLPRKWRGPLLLAPKS