Sequence details NCBI ID: XM_004854159.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Aldh1l1
Gene Name aldehyde dehydrogenase 1 family, member L1, transcript variant X2
Entrez Gene ID 101709289

Database interlinks

Part of NW_004624773.1 (Scaffold)

For more information consult the page for NW_004624773.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ALDH1L1 ENSCPOG00000006449 (Guinea pig)

Gene Details

aldehyde dehydrogenase 1 family, member L1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005809, Guinea pig)

Protein Percentage 95.57%
CDS Percentage 93.24%
Ka/Ks Ratio 0.10264 (Ka = 0.0232, Ks = 0.2263)

ALDH1L1 ENSG00000144908 (Human)

Gene Details

aldehyde dehydrogenase 1 family, member L1

External Links

Gene Match (Ensembl Protein ID: ENSP00000273450, Human)

Protein Percentage 92.24%
CDS Percentage 87.84%
Ka/Ks Ratio 0.07988 (Ka = 0.0414, Ks = 0.5178)

Aldh1l1 ENSMUSG00000030088 (Mouse)

Gene Details

aldehyde dehydrogenase 1 family, member L1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000114304, Mouse)

Protein Percentage 93.46%
CDS Percentage 87.32%
Ka/Ks Ratio 0.05788 (Ka = 0.0346, Ks = 0.5978)

Aldh1l1 ENSRNOG00000047023 (Rat)

Gene Details

aldehyde dehydrogenase 1 family, member L1

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000065882, Rat)

Protein Percentage 84.81%
CDS Percentage 81.37%
Ka/Ks Ratio 0.13678 (Ka = 0.1058, Ks = 0.7732)

Genome Location

Sequence Coding sequence

Length: 2709 bp    Location: 385590..468270   Strand: +
Raw sequence   
>XM_004854159.1
ATGAAGATTGCTGTGATTGGACAAAGCCTGTTTGGTCAGGAAGTTTACTGTCACCTAAGGAAGGAGGGTCATGAGATAGTGGGCGTGTTCACCATCCCAGACAAGGATGGGAAGGCTGACCCCCTAGGCCTGGAGGCTAAGAAGGATGGAGTGCCAGTGTTCAAGTTCCCACGATGGCGGGCACGAGGACAAGCTCTGCCTGATGTGGTGGCCAAATACCAGGCTTTGGGTGCCGAGCTCAACGTCTTGCCATTCTGCAGCCAGTTCATCCCCATGGAGGTCATTGATGCTCCTAGACATGGCTCCATCATCTACCACCCATCTCTGCTCCCCAGGCACCGGGGAGCTTCAGCCATCAACTGGACACTCATTCATGGAGATAAGAAAGGGGGCTTTACTGTCTTCTGGGCTGATGATGGTCTGGACACTGGGGACCTTCTGCTTCAGAAGGAATGTGAGGTGCTACCAGATGATACCGTCAGCACTTTGTACAACCGCTTCCTCTTCCCCGAAGGCATCAAAGGGATGGTGGAGGCTGTCAGGCTCATCTCAGAGGGCAAAGCCCCTAGACTCCCTCAGCCTGAAGAAGGAGCCACCTATGAGGGAATTCAGAAGAAGGAAACAGCCAAGATCAACTGGGACCAGCCAGCTGAGGCTATTCACAATTGGATCCGTGGGAATGACAAGGTGCCAGGTGCCTGGACAGAGGCTTGTGGACAGAAGCTGACATTTTTCAACTCGACGCTGAACACATCAGACCTTGTGCCAGAAGGAGAAGATTTGCTCATCCCAGGTGCCCATCGGCCAGGCATGGTCACCAAAGCAGGACTTATCCTCTTCGGAAATGATGACAGAATGCTACTGGTGAAGAACATACAGCTAGAGGATGGCAAGATGATCCCAGCCTCACACTTCTTCAAGGGAGCAGCGAGTAGTGCCCTCGAGTTGACAGAGGCAGAGGTGATCACTGCAGAGGCTGTACGGAGTGCTTGGCAGAGGATCCTCCCCAGTGTTCCAGACATTGAAGATTCCACGGATTTCTTCAAGTCAGGAGCTGCATCAGTGGATGTTGTGAGGTTGGTGGAAGAAGTGAAAGAGCTGTGTGATGGCCTGGAGTTAGAAAATGAAGATGTTTACATGGCAACCACCTTCGGGGACTTCATCCAGCTCTTAGTGAGGAAGCTGAGAGGAGAGGATGAAGAGAATGAGTGTGTCATTGACTATGTGGAGAAGGCAGTGAACAAGCTGACTCTCTACATTCCGCACCAGCTCTTCATCGGGGGCATGTTTGTGGATGCTGAGGGTACCAAGACCTACGATGCCATCAACCCAACAGATGGAAGTGTCATCTGCCAGGTGTCCCTGGCCCAGGTCAGTGATGTTGACAAGGCAGTGGCTGCAGCAAAGGATGCCTTTGAGAATGGGCTGTGGGGGAAGATCAGCGCACGGGACCGGGGCCGGCTCCTATACAGGTTAGCAGATCTCATGGAGCAGCACCAGGAAGAACTAGCCACCATTGAGGCCTTGGATGCCGGTGCTGTCTACACACTAGCCCTAAAGACTCATGTGGGCATGTCTATCCAGACCTTCCGCTACTTTGCTGGTTGGTGTGACAAGATCCAGGGCTGCACCATCCCCATCAACCAAGCCAGACCCAACCGCAACCTGACCTTGACCAAGAAAGAGCCTGTTGGTGTCTGTGGCATTGTCATTCCCTGGAACTATCCCCTGATGATGCTGTCCTGGAAGACAGCTGCCTGCCTTGCCGCTGGGAACACAGTAGTGATCAAGCCTGCCCAGGTAACACCACTCACAGCCTTGAAGTTTGCAGAGCTGACATTGAAGGCTGGCATTCCCAAGGGTGTGATCAACATTCTCCCAGGATCTGGCTCACTGGTTGGCCAGAGACTCTCAGACCATCCTGATGTGAGGAAAATTGGATTCACAGGTTCCACAGAGGTGGGCAAACACATCATGAGGAGCTGTGCCCTGAGTAATGTGAAGAAGATTTCCCTGGAGCTGGGTGGGAAGTCACCCCTCATCATCTTTGCTGACTGTGACCTCAACAAGGCTGTACAGATGGGGATGAGCTCTGTATTCTTCAACAAAGGGGAGAACTGCATTGCAGCAGGGCGGCTCTTTGTAGAGAACTCCATCCATGACCAGTTCGTGCAGAAGGTGGTGGAAGAGGTGAAGAAGATGAAGATTGGCAATCCTCTTGACAGAGACACCAACCACGGGCCACAGAACCACCAAGCCCACCTAAAGAAGCTGTTGGAGTATTGCCAGCATGGCATGAAAGAGGGGGCCACACTGATCTGTGGTGGGAATCAAGTCCCTCGGCCAGGTTTCTTCTTTGAGCCAACTGTTTTCACGGACGTGGAGGACCACATGTTCATAGCCAAGGAAGAGTCCTTCGGGCCCATCATGATCATCTCTCGCTTTGCCGATGGGGATGTGGACACTGTGCTGTCTCGCGCCAATGCCACAGAATTTGGCCTGGCTTCTGGAGTCTTCACCCGGGATATCAACAAGGCCCTGTATGTCAGTGACAAGCTTGAAGCAGGCACTGTGTTTGTCAACACATACAACAAGACTGACGTGGCTGCTCCCTTTGGAGGATTCAAGCAGTCTGGATTTGGCAAAGATTTAGGAGAGGCAGCCCTGAATGAATACCTGCGGGTCAAGACAGTGACTTTCGAGTACTGA

Related Sequences

XP_004854216.1 Protein

Aldh1l1 PREDICTED: cytosolic 10-formyltetrahydrofolate dehydrogenase isoform X2 [Heterocephalus glaber]

Length: 902 aa      View alignments
>XP_004854216.1
MKIAVIGQSLFGQEVYCHLRKEGHEIVGVFTIPDKDGKADPLGLEAKKDGVPVFKFPRWRARGQALPDVVAKYQALGAELNVLPFCSQFIPMEVIDAPRHGSIIYHPSLLPRHRGASAINWTLIHGDKKGGFTVFWADDGLDTGDLLLQKECEVLPDDTVSTLYNRFLFPEGIKGMVEAVRLISEGKAPRLPQPEEGATYEGIQKKETAKINWDQPAEAIHNWIRGNDKVPGAWTEACGQKLTFFNSTLNTSDLVPEGEDLLIPGAHRPGMVTKAGLILFGNDDRMLLVKNIQLEDGKMIPASHFFKGAASSALELTEAEVITAEAVRSAWQRILPSVPDIEDSTDFFKSGAASVDVVRLVEEVKELCDGLELENEDVYMATTFGDFIQLLVRKLRGEDEENECVIDYVEKAVNKLTLYIPHQLFIGGMFVDAEGTKTYDAINPTDGSVICQVSLAQVSDVDKAVAAAKDAFENGLWGKISARDRGRLLYRLADLMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGCTIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVINILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMRSCALSNVKKISLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVENSIHDQFVQKVVEEVKKMKIGNPLDRDTNHGPQNHQAHLKKLLEYCQHGMKEGATLICGGNQVPRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISRFADGDVDTVLSRANATEFGLASGVFTRDINKALYVSDKLEAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRVKTVTFEY