Details from NCBI annotation

Gene Symbol Vtcn1
Gene Name V-set domain containing T cell activation inhibitor 1
Entrez Gene ID 101720572

Database interlinks

Part of NW_004624772.1 (Scaffold)

For more information consult the page for NW_004624772.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

VTCN1 ENSCPOG00000024917 (Guinea pig)

Gene Details

V-set domain containing T cell activation inhibitor 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000016118, Guinea pig)

Protein Percentage 88.69%
CDS Percentage 91.17%
Ka/Ks Ratio 0.37307 (Ka = 0.0672, Ks = 0.1801)

VTCN1 ENSG00000134258 (Human)

Gene Details

V-set domain containing T cell activation inhibitor 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000358470, Human)

Protein Percentage 87.23%
CDS Percentage 88.18%
Ka/Ks Ratio 0.28328 (Ka = 0.0824, Ks = 0.2909)

Vtcn1 ENSMUSG00000051076 (Mouse)

Gene Details

V-set domain containing T cell activation inhibitor 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000057721, Mouse)

Protein Percentage 82.98%
CDS Percentage 82.74%
Ka/Ks Ratio 0.20331 (Ka = 0.1113, Ks = 0.5476)

Vtcn1 ENSRNOG00000015279 (Rat)

Gene Details

V-set domain containing T cell activation inhibitor 1 (Vtcn1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000020566, Rat)

Protein Percentage 82.27%
CDS Percentage 82.15%
Ka/Ks Ratio 0.20531 (Ka = 0.1164, Ks = 0.567)

Genome Location

Sequence Coding sequence

Length: 885 bp    Location: 12872399..12839001   Strand: -
>XM_004854126.1
ATGCCGTTTGCAGCCACAACTATAGAACTGTGCACAAATCTGAAATATGAGAATGTGGGTTCTAGCAGCATTATTAGCATCATCATTATTCTGGCTGGAGCAATTGCATTCATCATTGGCTTTGGTATTTCAGGGAAACACTTTATCACAGTCACTACCTTTACCTCAGCTGGGAACATTGGAGAGGATGGAATCCTGAGCTGCACTTTTGAACCTGATATCAAACTTAATGATATTGTGATACAATGGCTGAAGGAAGGTGTTATGGGTTTGGTCCATGAGTTCAAAGAAGGCAAAGATGACCTGTCAGACCAGAATGAAATGTTCAGAGGCCGGACAGCAGTGTTTGCTGATCAAGTGATAGTTGGCAATGCTTCTCTGAGACTGAAAAATATTCAACTCACAGATGCTGGCACCTACCAGTGTTACATCATCACTTCTAAAGGCAAAGGAAATGCTAACGTTGAGTATAAAACTGGAGCCTTCAGTATGCCAGAGGTGAATGTTGACAATAATGCCAGTTCAGAGAGCTTGCGCTGTGAGGCTCCCCGATGGTTCCCCCAGCCCACAGTGATCTGGTCATCCCAAGTTGACCAGGGTGCCAACTTTTCACAAGCCTCCAACACCAGCTTTGAGCTAAACTCTGAGAATGTGACCATGAAGGTTGTGTCCATGCTCTACAATGTCACAATCAACAACACTTACTCCTGTATGATTGAAAACAACATTGCCAAAGCTACAGGGGATATCAAAGTGACAGACTCTGAGATCAAAAGGCGGAGTCACCTAGAGTTACTGGACTCAAAGGCTTCCCTGTGTGTCTCTTCTTTCTTTCTCATCAGCTGGGTACTCTTGCCACTCTTCCCTTACCTGATGCTGAAATAA

Related Sequences

XP_004854183.1 Protein

Vtcn1 PREDICTED: V-set domain-containing T-cell activation inhibitor 1 [Heterocephalus glaber]

Length: 294 aa      View alignments
>XP_004854183.1
MPFAATTIELCTNLKYENVGSSSIISIIIILAGAIAFIIGFGISGKHFITVTTFTSAGNIGEDGILSCTFEPDIKLNDIVIQWLKEGVMGLVHEFKEGKDDLSDQNEMFRGRTAVFADQVIVGNASLRLKNIQLTDAGTYQCYIITSKGKGNANVEYKTGAFSMPEVNVDNNASSESLRCEAPRWFPQPTVIWSSQVDQGANFSQASNTSFELNSENVTMKVVSMLYNVTINNTYSCMIENNIAKATGDIKVTDSEIKRRSHLELLDSKASLCVSSFFLISWVLLPLFPYLMLK