Sequence details NCBI ID: XM_004854112.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol S100a10
Gene Name S100 calcium binding protein A10, transcript variant X2
Entrez Gene ID 101703277

Database interlinks

Part of NW_004624772.1 (Scaffold)

For more information consult the page for NW_004624772.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

S100A10 ENSCPOG00000003836 (Guinea pig)

Gene Details

S100 calcium binding protein A10

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003462, Guinea pig)

Protein Percentage 96.88%
CDS Percentage 92.01%
Ka/Ks Ratio 0.02695 (Ka = 0.013, Ks = 0.4807)

S100A10 ENSG00000197747 (Human)

Gene Details

S100 calcium binding protein A10

External Links

Gene Match (Ensembl Protein ID: ENSP00000357801, Human)

Protein Percentage 100.0%
CDS Percentage 93.81%
Ka/Ks Ratio 0.001 (Ka = 0.0004, Ks = 0.3584)

S100a10 ENSMUSG00000041959 (Mouse)

Gene Details

S100 calcium binding protein A10 (calpactin)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000036949, Mouse)

Protein Percentage 91.75%
CDS Percentage 89.35%
Ka/Ks Ratio 0.07857 (Ka = 0.0379, Ks = 0.4823)

Genome Location

Sequence Coding sequence

Length: 294 bp    Location: 19598852..19608271   Strand: +
Raw sequence   
>XM_004854112.1
ATGCCATCCCAAATGGAACACGCCATGGAAACCATGATGTTTACATTTCACAAATTTGCCGGGGACAAAGGCTACTTAACGAAGGAGGACCTGCGAGTACTCATGGAAAAGGAGTTCCCTGGGTTTTTGGAAAATCAAAAAGATCCTCTGGCTGTGGACAAAATCATGAAGGACCTGGACCAGTGCCGAGACGGCAAAGTGGGCTTCCAGAGCTTCTTTTCGCTAATCGCAGGCCTCACCATTGCGTGCAATGATTATTTTGTAGTGCACATGAAGCAGAAGGGAAAGAAGTAG

Related Sequences

XP_004854169.1 Protein

S100a10 PREDICTED: protein S100-A10 isoform X2 [Heterocephalus glaber]

Length: 97 aa      
>XP_004854169.1
MPSQMEHAMETMMFTFHKFAGDKGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGLTIACNDYFVVHMKQKGKK