Details from NCBI annotation

Gene Symbol Rorc
Gene Name RAR-related orphan receptor C, transcript variant X7
Entrez Gene ID 101700193

Database interlinks

Part of NW_004624772.1 (Scaffold)

For more information consult the page for NW_004624772.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RORC ENSCPOG00000023600 (Guinea pig)

Gene Details

RAR-related orphan receptor C

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000018723, Guinea pig)

Protein Percentage 89.88%
CDS Percentage 90.35%
Ka/Ks Ratio 0.15649 (Ka = 0.0506, Ks = 0.3232)

RORC ENSG00000143365 (Human)

Gene Details

RAR-related orphan receptor C

External Links

Gene Match (Ensembl Protein ID: ENSP00000327025, Human)

Protein Percentage 86.81%
CDS Percentage 88.39%
Ka/Ks Ratio 0.15793 (Ka = 0.065, Ks = 0.4117)

Rorc ENSMUSG00000028150 (Mouse)

Gene Details

RAR-related orphan receptor gamma

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000029795, Mouse)

Protein Percentage 86.56%
CDS Percentage 85.18%
Ka/Ks Ratio 0.11793 (Ka = 0.0724, Ks = 0.6139)

Gene Details

Uncharacterized protein

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000053293, Rat)

Protein Percentage 84.95%
CDS Percentage 85.42%
Ka/Ks Ratio 0.14254 (Ka = 0.0814, Ks = 0.5713)

Genome Location

Sequence Coding sequence

Length: 1530 bp    Location: 19501166..19478403   Strand: -
>XM_004854106.1
ATGGACAGGGCCCCACAGAGACACCACCGAGCCTCGAGGGCACAAATTGAAGTGATCCCTTGCAAAATCTGTGGGGACAAGTCATCTGGGATCCACTACGGGGTTATCACCTGTGAGGGGTGCAAGGGCTTCTTCCGCCGGAGCCAGCAGTGTAATGTGGCCTACTCCTGCACGCGGCAGCAGAACTGCCCCATCGACCGCACCAGCCGCAACCGATGCCAGCACTGCCGCCTGCAGAAATGCCTGGCACTGGGCATGTCCCGAGACGCTGTCAAGTTCGGCCGCATGTCCAAGAAGCAGAGGGACAGCCTGCACGCGGAGGTGCAGAAGCAACTACAGCAGCAGCAGCTGCAGTTGCAACGGGAGCAAGCAGCCAAGACCCCTCCCGCAAGGGCCCACGGAGCAGACGCCCTCACCTACACCTTGGGGCTCCCTGACGGGCAGCTGCCCCTGGGCTCCTCGCCTGACCTGCCCGAGGCCTCTGCCTGTCCCCCTGGCCTCCTGAGGGCCTCAGGCTCTGGGCTATCCTATTCAAACACCTCGGCCAAAGCAGAGCTCAGCGGGCCCCCCTGCCACCTCAAGTACAGCCCCGAGCAGGGCAAGGCAGAGGGGGCAGAGAGAGCCTGCGGCGAGGGCAGCCAGCTTGCCCCTGGCAGGTGTGGACTTCATTTTGGGGGACCCAGGCATCCTGGGCTTGGGCAACCAGGACAGGGCCCGGACAATTACTGCAGCCCCAGTTTCTGCAGCAGCCCAGAGGCACCATACGCCTGCCTGAAAGAGACTGAGCACCTGGTGCAGAACGTTTGCAAGTCCTACAGAGAGACCTGTCAGCTGCGACTGGAGGACCTGCTTCGGCAGCGCACCAACCTCTTCTCCCGAGAGGAGGTGACCAGCTACCAGAGGAAGTCCGAGTGGGAGATGTGGGAGCGCTGCGCCCACCGCCTCACCGAGGCTATCCAGCACGTGGTGGAGTTTGCTAAGCGGCTCTCTGGCTTCATGGAGCTCTGCCAGAACGACCAGATCATCCTACTGAAAGCAGGAGCGATGGAAGTTGTGCTGGTGAGGATGTGCCGCGCCTACAACGCCGACAACCACACAGTCTTTTTTGAAGGCAAATACGGTGGCGTGGAGCTGTTCCGAGCTTTGGGCTGCAGCGAGCTCATCGGCTCCATCTTTGATTTCTCCCACTCCCTGAGTGCCTTACGCCTTTCCGAGGACGAGATCGCCCTGTACACGGCCCTTGTTCTCATCAACGCCAACCGGCCAGGGCTCCAGGAGAAAAGGAAAGTAGAACAGCTGCAGTGCAGTCTGGAGCTGGCCTTTCATCATCATCTCTGCAGGACTCATCGCCAAGGCATCCTGGCAAGGCTGCCACCCAAGGGGAAGCTTCGGAGCCTGTGCAGCCAGCACGTAGAGAAGCTGCAAGTCTTCCAGCACCTCCACCCCATTGTGGTCCAAGCCGCCTTCCCACCGCTCTACAAGGAACTCTTCAGCACTGAAACCGAGTCCCCCGAGGGGCTGTCCGAGTGA

Related Sequences

XP_004854163.1 Protein

Rorc PREDICTED: nuclear receptor ROR-gamma isoform X7 [Heterocephalus glaber]

Length: 509 aa     
>XP_004854163.1
MDRAPQRHHRASRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQCNVAYSCTRQQNCPIDRTSRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLHAEVQKQLQQQQLQLQREQAAKTPPARAHGADALTYTLGLPDGQLPLGSSPDLPEASACPPGLLRASGSGLSYSNTSAKAELSGPPCHLKYSPEQGKAEGAERACGEGSQLAPGRCGLHFGGPRHPGLGQPGQGPDNYCSPSFCSSPEAPYACLKETEHLVQNVCKSYRETCQLRLEDLLRQRTNLFSREEVTSYQRKSEWEMWERCAHRLTEAIQHVVEFAKRLSGFMELCQNDQIILLKAGAMEVVLVRMCRAYNADNHTVFFEGKYGGVELFRALGCSELIGSIFDFSHSLSALRLSEDEIALYTALVLINANRPGLQEKRKVEQLQCSLELAFHHHLCRTHRQGILARLPPKGKLRSLCSQHVEKLQVFQHLHPIVVQAAFPPLYKELFSTETESPEGLSE