Details from NCBI annotation

Gene Symbol Snx27
Gene Name sorting nexin family member 27
Entrez Gene ID 101725173

Database interlinks

Part of NW_004624772.1 (Scaffold)

For more information consult the page for NW_004624772.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SNX27 ENSCPOG00000007869 (Guinea pig)

Gene Details

sorting nexin family member 27

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007083, Guinea pig)

Protein Percentage 99.26%
CDS Percentage 96.86%
Ka/Ks Ratio 0.03687 (Ka = 0.0037, Ks = 0.1002)

SNX27 ENSG00000143376 (Human)

Gene Details

sorting nexin family member 27

External Links

Gene Match (Ensembl Protein ID: ENSP00000357836, Human)

Protein Percentage 98.48%
CDS Percentage 94.26%
Ka/Ks Ratio 0.04888 (Ka = 0.01, Ks = 0.2052)

Snx27 ENSMUSG00000028136 (Mouse)

Gene Details

sorting nexin family member 27

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000102904, Mouse)

Protein Percentage 99.07%
CDS Percentage 93.69%
Ka/Ks Ratio 0.01578 (Ka = 0.0043, Ks = 0.272)

Snx27 ENSRNOG00000020893 (Rat)

Gene Details

sorting nexin family member 27 (Snx27), transcript variant 1, mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000067026, Rat)

Protein Percentage 99.07%
CDS Percentage 94.06%
Ka/Ks Ratio 0.01632 (Ka = 0.0042, Ks = 0.2602)

Genome Location

Sequence Coding sequence

Length: 1632 bp    Location: 19305374..19385298   Strand: +
>XM_004854081.1
ATGGCGGACGAGGACGGGGAAGGGATTCACCCCTCAGCCCCTCACAGGAACGGAGGCGGCGGCGGCGGTGGGGGATCTGGGCTCCACTGCGCCGGGAACGGCGGCGGCGGCGGCGGCGGCGGCGGCCCGCGGGTCGTGCGCATCGTCAAGTCCGAGTCCGGCTACGGCTTCAACGTGCGGGGCCAAGTGAGCGAGGGCGGGCAGCTGCGGAGCATCAACGGGGAGCTGTACGCGCCGCTGCAGCATGTGAGCGCCGTGCTGCCCGGGGGGGCGGCCGATCGGGCCGGGGTGCGCAAGGGGGACCGCATCCTGGAGGTGAACGGCGTGAATGTTGAGGGGGCAACACACAAGCAGGTGGTGGACCTGATCCGAGCAGGCGAGAAGGAATTGATCTTGACAGTGTTATCTGTACCTCCTCACGAGGCAGATAACCTAGACCCCAGTGACGACTCGTTGGGACAGTCTTTTTATGATTACACAGAAAAGCAAGCAGTGCCCATATCGGTCCCCACATACAAACATGTGGAGCAGAATGGTGAGAAATTTGTGGTATACAATGTTTACATGGCAGGGAGGCAGCTGTGTTCTAAACGGTACCGGGAATTTGCCATCCTACACCAGAACCTAAAGAGAGAGTTTGCCAACTTTACATTTCCCCGACTTCCAGGAAAGTGGCCATTCTCCTTATCAGAACAACAATTAGATGCCCGACGCCGGGGATTAGAAGAATATCTAGAAAAAGTTTGTTCAATACGAGTCATTGGTGAGAGTGATATCATGCAGGAATTCCTGTCAGAATCAGATGAGAACTACAATGGCATATCTGATGTAGAGCTGAGGGTAGCACTACCAGACGGAACAACAGTTACAGTCAGAGTGAAAAAGAATAGCACTACAGACCAAGTATATCAGGCTATTGCTGCAAAGGTTGGCATGGACAGTACAACAGTGAACTACTTTGCCTTATTTGAAGTGATCAATCATTCCTTTGTACGTAAGCTGGCACCTAATGAATTTCCTCATAAACTCTATGTCCAGAATTACACATCAGCTGTGCCAGGCACCTGCCTGACCATTCGAAAGTGGCTTTTTACAACAGAAGAAGAAATCCTCTTAAATGACAATGACCTTGCTGTTACCTACTTCTTTCATCAGGCTGTTGATGATGTAAAGAAAGGTTACATCAAAGCAGAGGAGAAGTCTTACCAGTTACAGAAGCTATATGAACAAAGGAAAATGGTCATGTACCTCAACATGCTAAGGACTTGTGAGGGCTACAATGAAATCATCTTCCCCCACTGTGCCTGTGATTCCAGGAGAAAGGGGCACGTTATCACAGCCATCAGCATCACGCACTTTAAGCTGCATGCCTGCACTGAGGAAGGACAGCTGGAGAACCAGGTCATAGCATTTGAATGGAATGAGATGCAGCGATGGGACACAGACGAAGAAGGAATGGCCTTCTGTTTTGAATATGCACGAGGAGAGAAGAAGCCCCGATGGGTTAAAATCTTCACACCTTATTTCAATTACATGCATGAATGCTTCGAGAGGGTGTTCTGCGAGCTCAAGTGGAGAAAAGAGAACATTTTCCAGATGGTGAGATCACAGCAGAGGGATGTGGCCACCTAG

Related Sequences

XP_004854138.1 Protein

Snx27 PREDICTED: sorting nexin-27 [Heterocephalus glaber]

Length: 543 aa      View alignments
>XP_004854138.1
MADEDGEGIHPSAPHRNGGGGGGGGSGLHCAGNGGGGGGGGGPRVVRIVKSESGYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGVRKGDRILEVNGVNVEGATHKQVVDLIRAGEKELILTVLSVPPHEADNLDPSDDSLGQSFYDYTEKQAVPISVPTYKHVEQNGEKFVVYNVYMAGRQLCSKRYREFAILHQNLKREFANFTFPRLPGKWPFSLSEQQLDARRRGLEEYLEKVCSIRVIGESDIMQEFLSESDENYNGISDVELRVALPDGTTVTVRVKKNSTTDQVYQAIAAKVGMDSTTVNYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLTIRKWLFTTEEEILLNDNDLAVTYFFHQAVDDVKKGYIKAEEKSYQLQKLYEQRKMVMYLNMLRTCEGYNEIIFPHCACDSRRKGHVITAISITHFKLHACTEEGQLENQVIAFEWNEMQRWDTDEEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKENIFQMVRSQQRDVAT