Sequence details NCBI ID: XM_004854059.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Arnt
Gene Name aryl hydrocarbon receptor nuclear translocator, transcript variant X4
Entrez Gene ID 101717560

Database interlinks

Part of NW_004624772.1 (Scaffold)

For more information consult the page for NW_004624772.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

Arnt ENSCPOG00000014578 (Guinea pig)

Gene Details

Cavia porcellus aryl hydrocarbon receptor nuclear translocator (Arnt), mRNA.

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000016607, Guinea pig)

Protein Percentage 94.92%
CDS Percentage 93.94%
Ka/Ks Ratio 0.19122 (Ka = 0.0303, Ks = 0.1585)

ARNT ENSG00000143437 (Human)

Gene Details

aryl hydrocarbon receptor nuclear translocator

External Links

Gene Match (Ensembl Protein ID: ENSP00000351407, Human)

Protein Percentage 94.93%
CDS Percentage 92.78%
Ka/Ks Ratio 0.12185 (Ka = 0.0268, Ks = 0.2196)

Arnt ENSMUSG00000015522 (Mouse)

Gene Details

aryl hydrocarbon receptor nuclear translocator

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000099810, Mouse)

Protein Percentage 91.77%
CDS Percentage 89.28%
Ka/Ks Ratio 0.13022 (Ka = 0.0448, Ks = 0.3444)

Arnt ENSRNOG00000031174 (Rat)

Gene Details

aryl hydrocarbon receptor nuclear translocator (Arnt), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000060764, Rat)

Protein Percentage 91.9%
CDS Percentage 89.03%
Ka/Ks Ratio 0.11599 (Ka = 0.0422, Ks = 0.364)

Genome Location

Sequence Coding sequence

Length: 2373 bp    Location: 18949266..19015504   Strand: +
Raw sequence   
>XM_004854059.1
ATGGCGGCAACTACTGCTAACCCAGAAATGACATCAGATGTACCATCACTGGGTCCAGCCATTGCCTCTGGAAACCCAGGGCCTGGGATTCAAGGTGGGGGAGCCATTGTCCAGAGGGCTATTAAGCGTCGAGCAGGGCTGGATTTTGATGATGATGGAGAAGGGAATGGTAAATTTTTGAGGTGTGATGATGATCAGATGTCTAATGATAAGGAGCGGTTTGCCAGGTCGGATGATGAGCAGAGCTCTGCGGATAAAGAGAGACTTGCCAGGGAAAATCACAGTGAAATTGAACGGCGGCGAAGGAACAAGATGACAGCTTACATCACAGAACTGTCAGACATGGTGCCCACCTGTAGTGCCCTGGCTCGAAAACCAGACAAGCTGACCATCTTACGCATGGCTGTTTCTCATATGAAGTCCTTACGGGGAACGGGCAACACATCCACTGATGGCTCCTACAAGCCATCTTTCCTCACTGATCAGGAACTGAAACATTTGATTTTGGAGGCAGCAGATGGCTTTCTGTTTATTGTCTCATGTGAGACAGGCCGGGTGGTGTATGTCTCAGATTCAGTGACTCCTGTTTTGAACCAGCCACAATCAGAATGGTTTGGCAGCACACTGTACGATCAGGTGCACCCAGATGATGTGGACAAACTTCGGGAGCAGCTTTCCACTTCGGAAAACGCCTTGACAGGGCGCATCCTGGATCTAAAAACTGGAACAGTGAAAAAAGAAGGTCAGCAGTCTTCCATGAGGATGTGTATGGGCTCAAGGAGATCATTTATTTGTCGAATGAGGTGTGGTAATAGCTCTGTGGACCCAGTCTCCATGAATAGACTGAGCTTTGTGAGAAATAGATGCAGGAATGGACTTGGCTCTGTGAAGGATGGAGAACCTCACTTTGTAGTGGTCCACTGCACAGGCTACATCAAGGCCTGGCCTCCGGCAGGTGTTTCCCTCCCAGATGATGACCCAGAGGCTGGCCAGGGGAGCAAGTTTTGCCTGGTTGCCATTGGCAGATTGCAGGTAACTAGTTCTCCTAACTGTACAGACATGAGTAATGTTTGTCAGCCGACAGAGTTCATCTCCCGCCACAACATTGAGGGGATATTCACTTTTGTGGATCACCGTTGCGTGGCCACTGTTGGCTACCAGCCACAGGAACTGTTAGGAAAGAATATTGTAGAATTCTGTCATCCTGAAGACCAGCAGCTTCTAAGAGACAGCTTCCAACAGGTGGTGAAGTTAAAAGGCCAGGTGCTGTCTGTCATGTTCCGGTTTCGGTCTAAGAATCGAGAATGGCTCTGGATGAGAACCAGCTCCTTTACCTTCCAGAACCCTTACTCAGATGAAATTGAGTACATCATCTGTACCAATACCAATGTAAAGAACTCTAGCCAGGAACCACGGTCTACCCTGTCTAACACCGTCCAGAGGTCTCAGCCAGGTCCCACAGCTAATTTACCCCTAGAGATGGGCTCAGGGCAGCTGGCACCCAGGCAGCAGCAACAGCAAACAGAACTGGACATGGTACCAGGAAGAGATGGATTGGCCAGCTACAATCATTCCCAGGTTTCTGTTCAGCCTGTGGCATCTACAGGGCCAGAACATGGCAAGACCCTTGAAAAGTCAGATGTTCTGTTTGCCCAGGATAGAGATCCAAGATTTTCAGAAATCTATTCTAACATCAGTGCGGATCAGAGTAAAGGCATCTCCTCCAGCACTGTCCCTGCCACCCAACAGCTGTTCTCCCAGGGCAGCTCATTCCCTCCTAACCCCCGGCCGGCCGAGAATTTCAGGAATAGTGGTCTGGCCCCTCCTGTAACCATTGTCCAGCCATCATCTTCTGCAGGACAGATGCTGGCCCAGATTTCCCGCCACCCCAACCCTTCCCAGGGAGCAGCCCCAACCTGGACCCCTAGTACCCGCTCAGGCTTCTCTGCCCAGCAGGTTGCTACACAGGCTGCAGCTAAGACTCGTTCTTCGCAGTTTGGTATAGGCAACTTTCAGACTCCGTCCTCCTTCAGCTCCCTGTCTCTTCCTACTGCACCCACTGCATCCCCCAGTGCCGCTGCCTACCCTGCCCTCACCAGTCGTGGATCCAGCTTTGCTCCTGAGGCTGGACAGACTGCAGGACAATTCCAGACACGGACAGCAGAGGGCGTGGGTGTCTGGCCACAGTGGCAGGGCCAACAGCCTCATCATCGGTCGAGTTCTAGTGAGCAACATGTTCAGCAGCCATCAGCACAACAACCTAGCCAGCCTGAGGTCTTCCAGGAGATGCTGTCCATGCTGGGAGACCAGAGCAGCAGCTACAACAATGAAGAATTTCCTGATCTAACTATGTTTCCCTCCTTTTCAGAATAG

Related Sequences

XP_004854116.1 Protein

Arnt PREDICTED: aryl hydrocarbon receptor nuclear translocator isoform X4 [Heterocephalus glaber]

Length: 790 aa      View alignments
>XP_004854116.1
MAATTANPEMTSDVPSLGPAIASGNPGPGIQGGGAIVQRAIKRRAGLDFDDDGEGNGKFLRCDDDQMSNDKERFARSDDEQSSADKERLARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSLRGTGNTSTDGSYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEWFGSTLYDQVHPDDVDKLREQLSTSENALTGRILDLKTGTVKKEGQQSSMRMCMGSRRSFICRMRCGNSSVDPVSMNRLSFVRNRCRNGLGSVKDGEPHFVVVHCTGYIKAWPPAGVSLPDDDPEAGQGSKFCLVAIGRLQVTSSPNCTDMSNVCQPTEFISRHNIEGIFTFVDHRCVATVGYQPQELLGKNIVEFCHPEDQQLLRDSFQQVVKLKGQVLSVMFRFRSKNREWLWMRTSSFTFQNPYSDEIEYIICTNTNVKNSSQEPRSTLSNTVQRSQPGPTANLPLEMGSGQLAPRQQQQQTELDMVPGRDGLASYNHSQVSVQPVASTGPEHGKTLEKSDVLFAQDRDPRFSEIYSNISADQSKGISSSTVPATQQLFSQGSSFPPNPRPAENFRNSGLAPPVTIVQPSSSAGQMLAQISRHPNPSQGAAPTWTPSTRSGFSAQQVATQAAAKTRSSQFGIGNFQTPSSFSSLSLPTAPTASPSAAAYPALTSRGSSFAPEAGQTAGQFQTRTAEGVGVWPQWQGQQPHHRSSSSEQHVQQPSAQQPSQPEVFQEMLSMLGDQSSSYNNEEFPDLTMFPSFSE