Sequence details NCBI ID: XM_004854050.1 (Coding sequence)

Details from NCBI annotation

Gene Symbol Setdb1
Gene Name SET domain, bifurcated 1, transcript variant X2
Entrez Gene ID 101715248

Database interlinks

Part of NW_004624772.1 (Scaffold)

For more information consult the page for NW_004624772.1 (Scaffold)

Genome Location

Sequence Coding sequence

Length: 3882 bp    Location: 18894227..18855403   Strand: -
Raw sequence   
>XM_004854050.1
ATGTCTTCCCTACCTGGGTGCATCGGTTTCGATGCAGCAACAGCTGCAGGGGAGTCTGAAGAGATTGCAGAGCTACAACAGGCAGTGGTTGAAGAGCTGGGTATTTCTATGGAGGAACTTCGGCAGTTCATCGATGAAGAACTGGAAAAGATGGATTGTGTACAACAGCGCAAGAAGCAGTTAGCAGAGTTGGAGACATGGGTAATACAGAAAGAATCTGAAGTGGCTCATGTTGACCAGCTCTTTGATGATGCATCCAGGGCAGTGACTAACTGTGAGTCTTTGGTGAAGGACTTCTATTCCAACCTGGGACTACAGTACCGGGACAGTAGCTCTGAGGATGAAGCTTCCCGGCCTACAGAAATAATTGAGATTCCTGATGAAGATGATGATGTGCTCAGTATTGATTCAGGTGATGCTGGGAGCAGAACTCCCAAAGACCAGAAGCTCCGTGAAGCCATGGCTGCCTTAAGAAAATCAGCTCAAGATGTCCAGAAGTTCATGGATGCCGTCAACAAGAAGAGCAGTTGTCAGGATTTGCATAAAGGAAGCTTCAGTCACATGTCTGGAGAACTGAGCAAAGATGGTGACCTGATAGTCAGCATGCGGATTCTGGGCAAGAAGAGAACTAAGACCTGGCACAAAGGGACCCTGATTGCCATCCAGACAGTGGGCTCAGGAAAGAAATACAAGGTGAAATTTGACAACAAAGGAAAGAGTCTGCTGTCTGGGAACCATATTGCCTATGATTACCACCCTCTTGCTGACAACCTGTATGTGGGCAGTCGAGTGGTAGCCAAATACAAAGATGGGAATCAGGTCTGGCTTTATGCTGGCATTGTAGCTGAGACACCAAACGTCAAAAACAAGCTCAGATTCCTCATTTTCTTTGATGATGGCTATGCTTCCTATGTCACACAGTCAGAACTGTATCCCGTTTGCCGACCACTGCAAAAGACTTGGGAGGACATAGAAGACACCTCCTGCCGAGACTTCATAGAGGAGTACATCACAGCCTATCCCAACCGGCCCATGGTGCTGCTCAAGAGTGGCCAGCTTATCAAGACCGAGTGGGAAGGCACCTGGTGGAAGTCCCGAGTGGAGGAGGTGGACGGCAGCCTTGTCAGGATCCTCTTCTTGGATGACAAAAGATGCGAGTGGATCTATCGAGGCTCTACCCGGCTGGAGCCCATGTTCAGCATGAAGACATCCTCAGCCTCTGCACTGGAGAAGAAGCAAGGGGGACAACTCAGGACACGTCCAAATATGGGTGCTGTGAGAAGCAAAGGTCCTGTTGTCCAGTACACCCAGGATCTGACGAGCACTGGAACCCAGTTCAAGCCAGTGGAGCCCCCACAACCTACAGCTCCACCTGCTCCATCTGTTCCACCTGCTCCACCTTTGTCCCCCCAGGCGGGTGACAATGAAAGTTTAGAAAGCCAGCTTGCTCAGTCACGGAAGCAGGTAGCCAAAAAGAGCACATCCTTCAGACCAGGATCTGTGGGCTCTGGTCATTCTTCCCCTACATCCCCTGCACTCAGTGAAAATGCCCCTGGTGGGAAACCTGGGATCAACCAGACATTCAGATCACTTTTAGGCTCAACAGCCTCTGTCCCGGCCCCTGCTGCGCCCCCAGGTCCTCCAGCCCCTCCAGCCTTCCATGGCATGCTGGAGCGAGCCCCAGCAGAGCCCTCGTACCGAGCCCCCATGGAGAAGCTTTTCTACTTACCTCATGTCTGCAGCTATACTTGTCTGTCTCGGGTCAGACCTATGAGGAGTGAGCAGTACCGAGGCAAGAATCCTCTGTTAGTCCCACTACTCTATGACTTCCGGCGGATGACTGCCCGGCGCCGAGTTAACCGCAAAATGGGCTTTCATGTCATCTATAAGACACCTTGTGGCCTCTGCCTTCGGACAATGCAAGAGATTGAACGCTACCTTTTTGAAACTGGATGTGACTTCCTCTTCCTGGAGATGTTCTGCTTGGATCCATACGTTCTAGTGGACCGAAAATTTCAGCCCTACAAGCCTTTTTACTATATTTTGGACATCACCTATGGGAAGGAAGATGTTCCCCTGTCCTGTGTCAATGAGATCGACACAACCCCCCCACCCCAGGTGGCCTATAGCAAGGAACGGATCCCAGGCAAGGGTGTTTTCATTAACACAGGTCCTGAATTTCTGGTTGGCTGTGACTGCAAGGATGGGTGTCGGGACAAGTCCAAGTGTGCCTGCCACCAGTTAACTATCCAAGCTACAGCCTGCACCCCAGGGGGCCAAATCAACCCCAACTCTGGCTACCAGTACAAGAGACTCGAAGAGTGTTTACCTACAGGGGTATATGAGTGTAACAAACGCTGCAAATGTGACCCAAACATGTGCACCAACCGGTTGGTGCAGCATGGACTCCAGGTCCGGCTACAGCTATTCAAGACCCAGAACAAAGGCTGGGGTATCCGCTGCTTGGATGATATTGCCAAAGGCTCTTTTGTGTGTATTTATGCAGGCAAAATCCTGACAGACGATTTTGCAGACAAGGAGGGCCTGGAAATGGGGGATGAGTACTTTGCAAACCTGGACCATATCGAGAGCGTGGAGAACTTCAAGGAAGGGTATGAGAGTGACATCCCCTGTTCCTCCGACAGCAGTGGCGTAGACTTGAAGGACCAGGAAGATGGCAACAGTGGTACAGAGGACCCTGAAGAGTCCAATGACGATAGCTCAGATGATAACTTCTGTAAGGATGAGGACTTTAGCACCAGCTCAGTGTGGCGTAGCTATGCTACCCGGAGACAGACCCGGGGCCAGAAGGAGAATGGGCTGTCTGAGATGGCTTCCAAGGACGCCCGTCCCCCAGACCTCGGGCCCCCACACATTCCTCTTCCTCCCACAATCCCTGCCGGTGTCTGCAATCCACCTTCCTCTGAAGAGACACCCAAGAGCAAGGTGGCCTCCTGGTTGAGCTGTAATAGTGTCAGTGAAAGTGGCTTCGCTGACTCTGACAGCCGCTCTTCCTTCAAGACTGCTGAGGGTGGGGAGGGCCGGGCTGCAGGAGGCCTCGGGGAGGCTGAGAAGACCTCTGCCTCGGGCCTGGGAATCAAGGACGAAGAAGACAGCAAGCAGGCTAAGAAGGAGGACCCTGATGACCGAAACAAGACGTCAGTTGTTCCCGAAAGCTCTCGAAATTATGGTTACAATCCTTCTCCAGTGAAGCCCGAAGGACTTCGCCGCCCACCTAGCAAGACAAGTATGCATCAGAGCCGGCGACTGCTGGCCGCTGCACAGTCCAACCCTGATGATGTCCTGACACTGTCCAGCAGCACCGAGAGTGAGGGGGAAAGTGGAACCAGCCAGAAGCCCACTGCTGGTCAGACTCCAGCCACAGCAGTTGACAGTGATGATATCCAGACCATTTCTTCTGGCTCTGAAGGCGATGACTTTGAGGACAAGAAGAACATGTCTGGTCCAATGAAGCGCCAAGTGGCAGTGAAATCAACCCGAGGCTTTGCTCTTAAGTCAACCCATGGCATTGCCATTAAATCAACCAACATGGCCTCCGTGGACAAGGGGGAGAGTGCACCTGTCCGTAAGAATACACGCCAGTTCTATGATGGTGAAGAGTCCTGCTACATCATCGATGCCAAGCTTGAAGGCAACCTGGGCCGCTACCTCAATCACAGCTGCAGCCCCAACCTGTTTGTCCAGAATGTCTTCGTGGATACTCACGATCTTCGCTTCCCCTGGGTAGCCTTCTTTGCCAGCAAGAGAATCCGGGCTGGGACAGAGCTAACTTGGGACTACAACTACGAGGTGGGCAGCGTGGAGGGCAAGGAGCTGCTGTGCTGCTGTGGGGCCATCGAGTGCAGAGGCCGTCTGCTCTAG

Related Sequences

XP_004854107.1 Protein

Setdb1 PREDICTED: histone-lysine N-methyltransferase SETDB1 isoform X2 [Heterocephalus glaber]

Length: 1293 aa      
>XP_004854107.1
MSSLPGCIGFDAATAAGESEEIAELQQAVVEELGISMEELRQFIDEELEKMDCVQQRKKQLAELETWVIQKESEVAHVDQLFDDASRAVTNCESLVKDFYSNLGLQYRDSSSEDEASRPTEIIEIPDEDDDVLSIDSGDAGSRTPKDQKLREAMAALRKSAQDVQKFMDAVNKKSSCQDLHKGSFSHMSGELSKDGDLIVSMRILGKKRTKTWHKGTLIAIQTVGSGKKYKVKFDNKGKSLLSGNHIAYDYHPLADNLYVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRFLIFFDDGYASYVTQSELYPVCRPLQKTWEDIEDTSCRDFIEEYITAYPNRPMVLLKSGQLIKTEWEGTWWKSRVEEVDGSLVRILFLDDKRCEWIYRGSTRLEPMFSMKTSSASALEKKQGGQLRTRPNMGAVRSKGPVVQYTQDLTSTGTQFKPVEPPQPTAPPAPSVPPAPPLSPQAGDNESLESQLAQSRKQVAKKSTSFRPGSVGSGHSSPTSPALSENAPGGKPGINQTFRSLLGSTASVPAPAAPPGPPAPPAFHGMLERAPAEPSYRAPMEKLFYLPHVCSYTCLSRVRPMRSEQYRGKNPLLVPLLYDFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEIERYLFETGCDFLFLEMFCLDPYVLVDRKFQPYKPFYYILDITYGKEDVPLSCVNEIDTTPPPQVAYSKERIPGKGVFINTGPEFLVGCDCKDGCRDKSKCACHQLTIQATACTPGGQINPNSGYQYKRLEECLPTGVYECNKRCKCDPNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDFADKEGLEMGDEYFANLDHIESVENFKEGYESDIPCSSDSSGVDLKDQEDGNSGTEDPEESNDDSSDDNFCKDEDFSTSSVWRSYATRRQTRGQKENGLSEMASKDARPPDLGPPHIPLPPTIPAGVCNPPSSEETPKSKVASWLSCNSVSESGFADSDSRSSFKTAEGGEGRAAGGLGEAEKTSASGLGIKDEEDSKQAKKEDPDDRNKTSVVPESSRNYGYNPSPVKPEGLRRPPSKTSMHQSRRLLAAAQSNPDDVLTLSSSTESEGESGTSQKPTAGQTPATAVDSDDIQTISSGSEGDDFEDKKNMSGPMKRQVAVKSTRGFALKSTHGIAIKSTNMASVDKGESAPVRKNTRQFYDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSVEGKELLCCCGAIECRGRLL