Details from NCBI annotation

Gene Symbol Scnm1
Gene Name sodium channel modifier 1, transcript variant X1
Entrez Gene ID 101705931

Database interlinks

Part of NW_004624772.1 (Scaffold)

For more information consult the page for NW_004624772.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SCNM1 ENSCPOG00000002184 (Guinea pig)

Gene Details

sodium channel modifier 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001980, Guinea pig)

Protein Percentage 87.83%
CDS Percentage 91.16%
Ka/Ks Ratio 0.45618 (Ka = 0.0715, Ks = 0.1567)

SCNM1 ENSG00000163156 (Human)

Gene Details

sodium channel modifier 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000357901, Human)

Protein Percentage 88.7%
CDS Percentage 89.71%
Ka/Ks Ratio 0.23718 (Ka = 0.0612, Ks = 0.2579)

Scnm1 ENSMUSG00000092607 (Mouse)

Gene Details

sodium channel modifier 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000134337, Mouse)

Protein Percentage 81.72%
CDS Percentage 81.72%
Ka/Ks Ratio 0.2563 (Ka = 0.1262, Ks = 0.4922)

Scnm1 ENSRNOG00000021092 (Rat)

Gene Details

sodium channel modifier 1 (Scnm1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000028639, Rat)

Protein Percentage 82.97%
CDS Percentage 83.41%
Ka/Ks Ratio 0.25365 (Ka = 0.1119, Ks = 0.4413)

Genome Location

Sequence Coding sequence

Length: 693 bp    Location: 18684206..18680176   Strand: -
>XM_004854020.1
ATGTCTTTCAAGAGGGAAGGAGACGATTGGAGTCAGCTCAATGTGCTCAAAAAACGAAGAGTTGGAGATTTGCTGGCCAGTTACATCCCAGAGGATGAAGCGCTGATGCTACGGGATGGACGCTTTGCTTGTGCCATCTGTCCTCATCGACCTGTACTGGACACACTGGCCATGCTGACTGCCCACCGTGCAGGCAAGAAGCATTTATCTAGCTTGCAGCTTTTCTATGGTAAGAAGCAGCCAGGAAAGGAATCGGAGCGAAATCCAAGACCACAGAATGAATTGAGGACGGAAGAGACCAAACCTGAGGCTCCTCTGCTAACTCAGACTCGACTGATCACCCAGAGTGCTCTGCATAGAGCTCCCCACTATAACAGTTGCTGCCGCCGGAAGCACAGACCAGAAGCCCCTGGTCCCTCAGACTCCCACTCCCCTTTGCCAGCCCGAGAGATTGAGCTCCAGAGTGAGAGGATCAGCAGGGAACCAGAGCCTGAGCCTGGCCTGCAGGCTAAGGAGTCAGCCACTGCCTCAGACCCTGCACCCATGAGCCCCACAAGAAAACGAGCCCTGGACCATTACCTCACCCTTCGAAGCTCTGGATGGATCCCAGATGGACAAGGTCGATGGATAAAAGATGAAAATGTTGAGTTTGACTCGGATGAGGAGGAACCCCCTGATCTCCCCTTGGACTGA

Related Sequences

XP_004854077.1 Protein

Scnm1 PREDICTED: sodium channel modifier 1 isoform X1 [Heterocephalus glaber]

Length: 230 aa      View alignments
>XP_004854077.1
MSFKREGDDWSQLNVLKKRRVGDLLASYIPEDEALMLRDGRFACAICPHRPVLDTLAMLTAHRAGKKHLSSLQLFYGKKQPGKESERNPRPQNELRTEETKPEAPLLTQTRLITQSALHRAPHYNSCCRRKHRPEAPGPSDSHSPLPAREIELQSERISREPEPEPGLQAKESATASDPAPMSPTRKRALDHYLTLRSSGWIPDGQGRWIKDENVEFDSDEEEPPDLPLD