Details from NCBI annotation

Gene Symbol Ctss
Gene Name cathepsin S, transcript variant X2
Entrez Gene ID 101697008

Database interlinks

Part of NW_004624772.1 (Scaffold)

For more information consult the page for NW_004624772.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CTSS ENSCPOG00000010629 (Guinea pig)

Gene Details

cathepsin S

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009541, Guinea pig)

Protein Percentage 58.87%
CDS Percentage 66.52%
Ka/Ks Ratio 0.42829 (Ka = 0.3781, Ks = 0.8827)

CTSS ENSG00000163131 (Human)

Gene Details

cathepsin S

External Links

Gene Match (Ensembl Protein ID: ENSP00000357981, Human)

Protein Percentage 84.58%
CDS Percentage 87.5%
Ka/Ks Ratio 0.2051 (Ka = 0.0771, Ks = 0.376)

Ctss ENSMUSG00000038642 (Mouse)

Gene Details

cathepsin S

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000015667, Mouse)

Protein Percentage 75.83%
CDS Percentage 79.17%
Ka/Ks Ratio 0.16847 (Ka = 0.133, Ks = 0.7894)

Ctss ENSRNOG00000021157 (Rat)

Gene Details

cathepsin S

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000028732, Rat)

Protein Percentage 71.25%
CDS Percentage 73.19%
Ka/Ks Ratio 0.23009 (Ka = 0.2185, Ks = 0.9494)

Genome Location

Sequence Coding sequence

Length: 723 bp    Location: 18446857..18428777   Strand: -
>XM_004853991.1
ATGCTTCACAACCTGGAACATTCAATGGGAATGCATTCCTATGATCTCGGCATGAACCACCTGGGAGACATGACCAGTGAAGAAGTGCGGTCTTTGATGAGCTCCCTGAGAGTTCCCAGACAATGGCTCAGAAATGTCACTTACAAATCAGACCCTAATCAGAAACTGCCGGATTCTGTGGACTGGAGAGAAAAGGGCTGTGTTACTGAAGTGAAATACCAGGGTGCCTGTGGTTCCTGCTGGGCTTTCAGTGCGGTGGGGGCCCTGGAAGGACAGCTGAAGCTGAAAACAGGAAAGCTGGTATCTCTCAGTGCACAGAACCTGGTGGACTGTTCAACTGAAAAATATAGAAATAAAGGCTGCAGCGGTGGCTTCATGACGGAGGCCTTCCAGTATGTCATCGATAACAATGGCATTGACTCAGAAACTTCCTATCCCTACAAAGCCACGGATGAAAAATGCCATTATGATTCAAAAAATCGTGCTGCCACATGTTCACGTTACACAGAACTTCCCTACGGCAGCGAAGAAGCCCTGAAAGAAGCCGTGGCCAACAAAGGACCAGTGTCTGTTGCTGTTGATGCGAGCCGCCCTTCGTTCTTCCTCTACAAAAATGGTGTCTACGATGACCCCTCCTGTACTCAGAATGTGACTCATGGTGTACTAGCAGTTGGCTATGGTAACCTTAATGGGAAAGACTACTGGCTTGTGAAAAACAGGTAA

Related Sequences

XP_004854048.1 Protein

Ctss PREDICTED: cathepsin S isoform X2 [Heterocephalus glaber]

Length: 240 aa      View alignments
>XP_004854048.1
MLHNLEHSMGMHSYDLGMNHLGDMTSEEVRSLMSSLRVPRQWLRNVTYKSDPNQKLPDSVDWREKGCVTEVKYQGACGSCWAFSAVGALEGQLKLKTGKLVSLSAQNLVDCSTEKYRNKGCSGGFMTEAFQYVIDNNGIDSETSYPYKATDEKCHYDSKNRAATCSRYTELPYGSEEALKEAVANKGPVSVAVDASRPSFFLYKNGVYDDPSCTQNVTHGVLAVGYGNLNGKDYWLVKNR