Details from NCBI annotation

Gene Symbol Ecm1
Gene Name extracellular matrix protein 1
Entrez Gene ID 101723142

Database interlinks

Part of NW_004624772.1 (Scaffold)

For more information consult the page for NW_004624772.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ECM1 ENSCPOG00000010599 (Guinea pig)

Gene Details

extracellular matrix protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009519, Guinea pig)

Protein Percentage 75.98%
CDS Percentage 84.52%
Ka/Ks Ratio 0.47167 (Ka = 0.1426, Ks = 0.3024)

ECM1 ENSG00000143369 (Human)

Gene Details

extracellular matrix protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000358045, Human)

Protein Percentage 69.55%
CDS Percentage 78.02%
Ka/Ks Ratio 0.4229 (Ka = 0.211, Ks = 0.4989)

Ecm1 ENSMUSG00000028108 (Mouse)

Gene Details

extracellular matrix protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000112665, Mouse)

Protein Percentage 69.24%
CDS Percentage 75.36%
Ka/Ks Ratio 0.28463 (Ka = 0.2121, Ks = 0.7453)

Ecm1 ENSRNOG00000021166 (Rat)

Gene Details

extracellular matrix protein 1 (Ecm1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000028740, Rat)

Protein Percentage 69.95%
CDS Percentage 76.57%
Ka/Ks Ratio 0.32949 (Ka = 0.2075, Ks = 0.6298)

Genome Location

Sequence Coding sequence

Length: 1695 bp    Location: 18234542..18239691   Strand: +
>XM_004853978.1
ATGGGGGTCGTGTCCAGAGCAGCCGCGATCTTGGCCTGTTTGGCCTTAGCTTCTGCTGCCTCCGAGGGAGGCTTCGAGCCTGCAGGACAGAGGGAATTGAGGCCAGTGCATTTCACTCAGCGCTTTGAAGAAGTGGGCTATGCAGCACCCCCAGCCCCACCCCGGACCAGGACCCGAGGCTTCCCCATGGGTCACCAGGACCAGGATGCTTCTCAGTACGACCCTCCCTTTGAGGGACAGGCGGAAGTGAACATGGCCCCTGGCCCCCAGGAAGCGATCCCCCTGCAAGAAGAGCTGCCCCCTCTTCGGCGCCCTGATGGAAAGAAAGTGGATGGCCCTGTCCCTCAGGAAGAGGTCTCCGTCCAGGAAGAGGTGGCCCCTCCCCGGCGCCCTACTGAATGGGAAGAAAGGGGCTCACCCTTCACACACCAGGAGAAAATCGTCCGGGCCAGGCAGACGGAGGAAAAGCCAGGTCCCCTCACTGGTCAGGGCCCTGTGGATCCTCAGTCCTGGAACTCAGCCCAGCACTGCCAACAAGGCCGATTCCGAGGGGGCTGGGGCTACCGGCTGGATGGCTTCCCCCCGGGCCGGCCTTCAGAAGCCAATCTGAAGCAGATCTGCCTCCCCAACCGGCAACACGTGGTGTACGGCCCTTGGAACCTGCCCCAGTCTGGCTACTCCCACCTCAGCCGCCAGGGAGAGACCCTCAATTTTCTGGAGACTGGCTATTCCCGATGCTGCCGCTGCCAGAGTGCCACACAGCGCCTGGAGTGTGCAAAACTTGTGTGGGAGGACTCAATGACCCGGTTCTGTGAGGCCGAGTTCTCGGTCAAGACCCGACCACACTTGTGCTGCAAGCGGCAGGGGGAGGCCCGGTTCTCCTGCTTCCAGGAGGGAGCTCCTCAGCCACACTACCAGCTCCCAGCCTGCCCCAGCCACCAGCCTGCTGTTTCCATGGGCCTGGAGGTGCCCTTTCCCCCTGGGCTGCCCACACTGGACAATGTCAAGAACATCTGCCATCTGAGACGCTTGCGAGCTGTGCCACGCAACCTCCCAGCCACTGACCCCATCCAAAGACAGCTGCACGCTCTGACGCAGCTGGAGGTCGAGTTCCAGCACTGCTGCCTCCAGGGGAACAACCACACCTGTACTCAGAAGGCCTGGGAGGACACCCTGGATGGCTACTGTGACCGGGAGCAGGCCATAAAGACCCACCAGCACTCATGTTGCCACTACCCACCCAGCCCCGCCCGTGATGAGTGCTTTGCCAGGCGGGCTCCCTTCCCCAACTATGACCGGGACATCTTGACCCTCGACCTCAGCCGTGTCACCCCCAACCTCATGGGCCATCTCTGTGGAAACCAAAAAGTTATCACCAAACATAAACAGATCCTTGGGCTGATCTGGAACATGACTGCCCGCTGCTGTGAGCTGCCATTTCCGGAGCAGGCCTGCTGTGCTGAGGAGGAGAAATCAGCCTTCATTGAAGATCTCTGTGGTCCGAGACGGTACTTCTGGAGAGATTCTGCCTTCTGCTGTGACCTGAGGCCTGGGGATGAACAGACCAACTGCTTCAACATCAATTATCTGAGGAATGTGGCCCTAGTGGCTGGAGACACTGGGGAGGCCAGGGGAGAACAGGGCCCAACCCGGGGAGCAAATGTCAGCCCTGCCTTTGAGTCCAAGGAAGAATGA

Related Sequences

XP_004854035.1 Protein

Ecm1 PREDICTED: extracellular matrix protein 1 [Heterocephalus glaber]

Length: 564 aa      View alignments
>XP_004854035.1
MGVVSRAAAILACLALASAASEGGFEPAGQRELRPVHFTQRFEEVGYAAPPAPPRTRTRGFPMGHQDQDASQYDPPFEGQAEVNMAPGPQEAIPLQEELPPLRRPDGKKVDGPVPQEEVSVQEEVAPPRRPTEWEERGSPFTHQEKIVRARQTEEKPGPLTGQGPVDPQSWNSAQHCQQGRFRGGWGYRLDGFPPGRPSEANLKQICLPNRQHVVYGPWNLPQSGYSHLSRQGETLNFLETGYSRCCRCQSATQRLECAKLVWEDSMTRFCEAEFSVKTRPHLCCKRQGEARFSCFQEGAPQPHYQLPACPSHQPAVSMGLEVPFPPGLPTLDNVKNICHLRRLRAVPRNLPATDPIQRQLHALTQLEVEFQHCCLQGNNHTCTQKAWEDTLDGYCDREQAIKTHQHSCCHYPPSPARDECFARRAPFPNYDRDILTLDLSRVTPNLMGHLCGNQKVITKHKQILGLIWNMTARCCELPFPEQACCAEEEKSAFIEDLCGPRRYFWRDSAFCCDLRPGDEQTNCFNINYLRNVALVAGDTGEARGEQGPTRGANVSPAFESKEE