Details from NCBI annotation

Gene Symbol Aph1a
Gene Name APH1A gamma secretase subunit, transcript variant X1
Entrez Gene ID 101717558

Database interlinks

Part of NW_004624772.1 (Scaffold)

For more information consult the page for NW_004624772.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

APH1A ENSCPOG00000006509 (Guinea pig)

Gene Details

APH1A gamma secretase subunit

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005861, Guinea pig)

Protein Percentage 98.87%
CDS Percentage 96.86%
Ka/Ks Ratio 0.06296 (Ka = 0.0058, Ks = 0.0924)

APH1A ENSG00000117362 (Human)

Gene Details

APH1A gamma secretase subunit

External Links

Gene Match (Ensembl Protein ID: ENSP00000358105, Human)

Protein Percentage 98.87%
CDS Percentage 96.73%
Ka/Ks Ratio 0.05167 (Ka = 0.0055, Ks = 0.1061)

Aph1a ENSMUSG00000015750 (Mouse)

Gene Details

anterior pharynx defective 1a homolog (C. elegans)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000058846, Mouse)

Protein Percentage 98.87%
CDS Percentage 94.09%
Ka/Ks Ratio 0.02497 (Ka = 0.0055, Ks = 0.22)

Aph1a ENSRNOG00000023816 (Rat)

Gene Details

APH1A gamma secretase subunit (Aph1a), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000053129, Rat)

Protein Percentage 97.98%
CDS Percentage 92.58%
Ka/Ks Ratio 0.04622 (Ka = 0.0122, Ks = 0.2635)

Genome Location

Sequence Coding sequence

Length: 798 bp    Location: 18022420..18018896   Strand: -
>XM_004853960.1
ATGGGGGCTGCAGTGTTTTTCGGATGCACTTTCGTCGCGTTCGGCCCAGCCTTCGCGCTGTTCTTGATCACGGTGGCTGGGGACCCCCTTCGCGTTATCATCTTGGTCGCGGGGGCATTTTTCTGGCTGGTCTCCCTGCTTCTGGCCTCCGTGATCTGGTTCATCTTGGTCCATGTGACAGACCGGTCAGATGCCCGGCTCCAGTATGGCCTCCTGATTTTTGGTGCTGCTGTCTCTGTCCTTCTACAGGAGGTGTTCCGCTTTGCCTACTACAAGCTCCTTAAGAAGGCAGATGAGGGGTTAGCATCGCTGAGTGAGGACGGAAGATCACCCATCTCCATCCGACAGATGGCCTATGTTTCTGGTCTCTCCTTCGGTATCATCAGTGGTGTCTTCTCTGTTATCAATATTTTGGCCGATGCACTTGGGCCAGGTGTGGTTGGGATCCATGGAGACTCACCCTATTACTTCCTGACCTCAGCCTTTCTGACAGCAGCCATTATCCTGCTCCATACCTTTTGGGGAGTTGTGTTCTTTGATGCCTGTGAGAGGAGACGGTACTGGGCTTTGGGCCTGGTGGTTGGGAGTCACCTACTGACATCAGGACTGACGTTCTTGAACCCATGGTATGAAGCCAGCCTGCTGCCCATCTATGCAGTCACTGTTTCCATGGGGCTCTGGGCCTTCATCACAGCGGGAGGGTCCCTCCGAAGTATCCAGCACAGCCTCTCGTGCCGACGGCAGGAGGACAGTCGGGTGATGGTGTATTCTGCCCTGCGCATCCCACCCGAGGACTGA

Related Sequences

XP_004854017.1 Protein

Aph1a PREDICTED: gamma-secretase subunit APH-1A isoform X1 [Heterocephalus glaber]

Length: 265 aa      View alignments
>XP_004854017.1
MGAAVFFGCTFVAFGPAFALFLITVAGDPLRVIILVAGAFFWLVSLLLASVIWFILVHVTDRSDARLQYGLLIFGAAVSVLLQEVFRFAYYKLLKKADEGLASLSEDGRSPISIRQMAYVSGLSFGIISGVFSVINILADALGPGVVGIHGDSPYYFLTSAFLTAAIILLHTFWGVVFFDACERRRYWALGLVVGSHLLTSGLTFLNPWYEASLLPIYAVTVSMGLWAFITAGGSLRSIQHSLSCRRQEDSRVMVYSALRIPPED