Sequence details NCBI ID: XM_004853949.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Otud7b
Gene Name OTU domain containing 7B, transcript variant X2
Entrez Gene ID 101713492

Database interlinks

Part of NW_004624772.1 (Scaffold)

For more information consult the page for NW_004624772.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

OTUD7B ENSCPOG00000001517 (Guinea pig)

Gene Details

OTU domain containing 7B

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001372, Guinea pig)

Protein Percentage 94.0%
CDS Percentage 92.94%
Ka/Ks Ratio 0.15825 (Ka = 0.0315, Ks = 0.199)

OTUD7B ENSG00000163113 (Human)

Gene Details

OTU domain containing 7B

External Links

Gene Match (Ensembl Protein ID: ENSP00000358131, Human)

Protein Percentage 92.16%
CDS Percentage 90.3%
Ka/Ks Ratio 0.13154 (Ka = 0.0411, Ks = 0.3124)

Otud7b ENSMUSG00000038495 (Mouse)

Gene Details

OTU domain containing 7B

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000088291, Mouse)

Protein Percentage 90.57%
CDS Percentage 88.11%
Ka/Ks Ratio 0.11788 (Ka = 0.049, Ks = 0.4154)

Otud7b ENSRNOG00000042068 (Rat)

Gene Details

OTU domain containing 7B (Otud7b), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000039488, Rat)

Protein Percentage 91.18%
CDS Percentage 88.08%
Ka/Ks Ratio 0.10341 (Ka = 0.0452, Ks = 0.4371)

Genome Location

Sequence Coding sequence

Length: 2529 bp    Location: 17776959..17720301   Strand: -
Raw sequence   
>XM_004853949.1
ATGACCCTGGACATGGATGCTGTCCTGTCGGATTTTGTCCGTTCCACAGGAGCAGAGCCAGGGCTAGCCCGAGATCTCCTGGAAGGAAAAAATTGGGACGTGAGTGCTGCCCTCAGTGACTTTGAACAGCTACGTCAAGTCCATGCTGGGTGCCTGCCCCTGGCCTTTAGTGAAGGGAGCAGTGGCTCCCAAACCCCTGAAAAGGGCTGTTCTGATAGGGAGTGTGCTCGCCCTTCCCGACCCAGCTTGCAGCGGCAAGATGACATCATTCAAGAAAAACGTCTGTCTAGGGGCATCTCCCACGCCAGCTCCAGCATTGTCTCCCTGGCCCGGTCCCAGGTCTCCTCCAGTGGTGGGGGTGGGGGGAGCAATGAGCACCCCCTGGAAATGCCCATCTGTGCTTTCCAGCTTCCAGATCTCACCGTGTACAGCGAAGACTTCCGCAGCTTCATAGAGAGAGACCTCATTGAACAGTCCATGTTGGTTGCCTTGGAGCAGGCAGGGCGTTTGAATTGGTGGGTTAGTGTGGACCCCACCTGTCAGAGACTTCTTCCTTTGGCAACTACTGGAGATGGGAACTGCCTCCTGCATGCAGCTTCTCTTGGGATGTGGGGTTTCCATGATCGGGACTTGGCACTGAGGAAATCATTGTATGCACTGATGGAAAAGGGAATGGAGAAAGAAGCATTGAAAAGGCGCTGGAGGTGGCAGCAAACACAGCAGAACAAAGAGTCAGGACTGGTATACACAGAGGAAGAATGGCAGAAGGAATGGAATGAGCTGATCAAGCTTGCCTCAAGTGAGCCGCGAATGCATCTTGGTACCAATGGAGCCAATGGAGGAGGGGTGGAGAGCTCAGAAGAGCCTGTGTATGAGAGCCTGGAAGAGTTCCACGTCTTTGTCCTCGCTCATGTGCTCAAAAGGCCGATAGTTGTGGTGGCGGACACCATGCTGAGGGACTCTGGAGGGGAAGCATTTGCCCCTATTCCCTTTGGGGGAATCTATCTGCCCTTGGAGGTCCCCATCAGCCAGTGTCACCGATCCCCTCTGGTGCTCGCCTATGATCAGGCCCACTTTTCTGCACTTGTGTCCATGGAGCAGAAGGAGAATGCCAAGGAACAAGCTGTGATCCCACTTACAGACTCAGAGCATAAGCTGCTGCCCTTGCACTTTGCAGTGGACCCAGGAAAAGGCTGGGAGTGGGGCAAAGATGACAGTGACAATGTCCGATTGGCCAGTGTAATTCTGTCCCTGGAGGTCAAATTGCATCTGCTGCATAGCTACATGAATGTGAAGTGGATCCCACTGTCCTTTGATGCACAGGCTCCTCTGGCGCAGCCCGAGTCCCCCACAGCTTCAGCTGGAGATGAGCCTCGGTCCACACCTGAGTCTGGGGAATCAGACAAGGAGTCCGTTGGCAGCAGTTCTACCAGCAATGAGGGCAACAAGTGGAAAGAGAAGTCCAAGCGAGATCGGGAGAAGGACAAGAAGAGAGCAGATTCCGTGGCTAACAAACTTGGCAGCTTTGGCAAAACCTTGGGCAGCAAGCTCAAAAAGAACATGGGAGGCCTGATGCACAGCAAAGGCTCTAAGCCTGGCGGGGCAGGGACTGGGTCAGGGGTAAACAGTGGCACTGAGACACTGGAGAAAAAGAAGAAAAACTCACTGAAGAGTTGGAAGGGTGGCAAAGAAGAGGGAGCCGGGGATGGGCCTGTGTCTGAGAAGCCCACATCTGAGTCTGTTGGTAATGGGGGAAGCAAGTATAGCCAGGAAGTGATGCAAAGCCTGAGCATTATGAGGATCGCAATGCAAGGGGAAGGGAAATTTATTTTTGTTGGAACGCTGAAGATGGGTCACCGTCAACAGTATCAGGAGGAGATGATCCAGCGGTACCTTGCTGATGCGGAGGAGAGATTCCTGGCAGAGCAGAAGCAGAAGGAGGCAGAGAGGAAGATCATTAATGGAGGGGTAGGGAGTGGGCCTCCCCCAGCCAAAAAACCAGAGCCAGATGGGGAGGAGCAGCTGACTGCGCCTGCAGGAGAATCCAAGGCAATGGCCTTTTCAACTGGCTACCCTGGGGGCTTTACCATCCCTCGGCCTTCTGGGGGTGGAGTCCACTGCCAGGAACCCAGGAGGCAGCTGGCAGGGGGTCCATGTGGGGGGGTGCTACCACCATATGCTACCTTCCCCAGACAGTGTCCTCCTGGGCGACCTTACCCCCACCAGGACAGCGTCCCACCTCTGGAGCCAGATACTCACTCCAAGGATGGAGTTCCCAGGGGCACACTGTTGCCACCCCGCTTCCGCGTGGCTGATTCCTATAGCAATGGCTACAGGGAACCCCCTGAGCCAGATGGATGGGCTGGAGGTTCCCAGGGGCTTCCCTCAACCCAGACCAAGTGCAAACAACCGAACTGCAGCTTCTATGGACACCCTGAGACAAACAACTTCTGCTCTTGCTGTTATAGGGAAGAACTGAGGAGGAGGGAACGTGAACCTGGTGGGGAGCTACTGGTGCACAGATTCTGA

Related Sequences

XP_004854006.1 Protein

Otud7b PREDICTED: OTU domain-containing protein 7B isoform X2 [Heterocephalus glaber]

Length: 842 aa      View alignments
>XP_004854006.1
MTLDMDAVLSDFVRSTGAEPGLARDLLEGKNWDVSAALSDFEQLRQVHAGCLPLAFSEGSSGSQTPEKGCSDRECARPSRPSLQRQDDIIQEKRLSRGISHASSSIVSLARSQVSSSGGGGGSNEHPLEMPICAFQLPDLTVYSEDFRSFIERDLIEQSMLVALEQAGRLNWWVSVDPTCQRLLPLATTGDGNCLLHAASLGMWGFHDRDLALRKSLYALMEKGMEKEALKRRWRWQQTQQNKESGLVYTEEEWQKEWNELIKLASSEPRMHLGTNGANGGGVESSEEPVYESLEEFHVFVLAHVLKRPIVVVADTMLRDSGGEAFAPIPFGGIYLPLEVPISQCHRSPLVLAYDQAHFSALVSMEQKENAKEQAVIPLTDSEHKLLPLHFAVDPGKGWEWGKDDSDNVRLASVILSLEVKLHLLHSYMNVKWIPLSFDAQAPLAQPESPTASAGDEPRSTPESGESDKESVGSSSTSNEGNKWKEKSKRDREKDKKRADSVANKLGSFGKTLGSKLKKNMGGLMHSKGSKPGGAGTGSGVNSGTETLEKKKKNSLKSWKGGKEEGAGDGPVSEKPTSESVGNGGSKYSQEVMQSLSIMRIAMQGEGKFIFVGTLKMGHRQQYQEEMIQRYLADAEERFLAEQKQKEAERKIINGGVGSGPPPAKKPEPDGEEQLTAPAGESKAMAFSTGYPGGFTIPRPSGGGVHCQEPRRQLAGGPCGGVLPPYATFPRQCPPGRPYPHQDSVPPLEPDTHSKDGVPRGTLLPPRFRVADSYSNGYREPPEPDGWAGGSQGLPSTQTKCKQPNCSFYGHPETNNFCSCCYREELRRREREPGGELLVHRF