Sequence details NCBI ID: XM_004853919.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Pex11b
Gene Name peroxisomal biogenesis factor 11 beta
Entrez Gene ID 101703622

Database interlinks

Part of NW_004624772.1 (Scaffold)

For more information consult the page for NW_004624772.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PEX11B ENSCPOG00000002755 (Guinea pig)

Gene Details

peroxisomal biogenesis factor 11 beta

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002501, Guinea pig)

Protein Percentage 91.89%
CDS Percentage 93.44%
Ka/Ks Ratio 0.30947 (Ka = 0.0418, Ks = 0.135)

PEX11B ENSG00000131779 (Human)

Gene Details

peroxisomal biogenesis factor 11 beta

External Links

Gene Match (Ensembl Protein ID: ENSP00000358312, Human)

Protein Percentage 94.21%
CDS Percentage 91.12%
Ka/Ks Ratio 0.12471 (Ka = 0.0318, Ks = 0.2554)

Pex11b ENSMUSG00000028102 (Mouse)

Gene Details

peroxisomal biogenesis factor 11 beta

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000113365, Mouse)

Protein Percentage 88.42%
CDS Percentage 86.62%
Ka/Ks Ratio 0.16314 (Ka = 0.063, Ks = 0.3863)

Pex11b ENSRNOG00000021216 (Rat)

Gene Details

peroxisomal biogenesis factor 11 beta (Pex11b), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000028811, Rat)

Protein Percentage 88.76%
CDS Percentage 85.66%
Ka/Ks Ratio 0.15124 (Ka = 0.0656, Ks = 0.4335)

Genome Location

Sequence Coding sequence

Length: 822 bp    Location: 17281364..17271091   Strand: -
Raw sequence   
>XM_004853919.1
ATGGGGCGGGAGCGGGGCTGTGGAGCCGCGGCGGCCTCTGTCATGGACTCCTGGGTCCGCTTCAGTGCTCAGAGCCAGGCTCGGGAGCGGCTCTGTCGGGGTGCCCAGTATGCGTGCTCCCTTCTTGGCCATGCCCTGCAGAGACGTGGGGCCAGTCCTGACTTATTGAAACAGATTCAACAACTGGAGAGTCATCTCAGCCTTGGAAGAAAGATTCTACGCCTGGGCAACTCAGCAGATGCTCTCGAGTCAGCCAAAAGAGCTGTGCACCTATCCGATATTGTCCTGAGATTCTGCATCACGGTTAGTCACCTCAATCGAGCCTTGTACTTCGCATGTGACAATGTCCTATGGGCTGGAAAGTCTGGACTAGCTCCCTGTGTGGATCAAGAGAAGTGGGCTCAGCGCTCATTCAGGTACTATCTCTTTTCCCTCATCATGAATTTGAGCCGGGATGCTTATGAAATTCGCTTACTCATGGAACAAGAGTCTTCAGCTTGTAACCGGCGACTGAAGGGTTCTGCAGGAGGAGTCCCAGGAGGACTTGAAACTGGGGGACCTGGGGGACCAGGAACTCCAGGAAGAGGCCTGCCTCACCTGGCTCTGAAGCTTCGGCTCCAAGTCTTGCTCCTGGCTCGGGTCCTTCGAGGTCATCCCCCACTTCTGCTAGATGTAGTCAGAAATGCCTGTGATCTCTTCATACCACTGGACAAATTAGGCCTCTGGCGCTGTGGCCCTGGAATTGTGGGGCTTTGTGGCCTTGTGTCCTCCATCCTGTCAATTCTCACCCTAATCTATCCCTGGTTACGACTCAAGCCATGA

Related Sequences

XP_004853976.1 Protein

Pex11b PREDICTED: peroxisomal membrane protein 11B [Heterocephalus glaber]

Length: 273 aa      View alignments
>XP_004853976.1
MGRERGCGAAAASVMDSWVRFSAQSQARERLCRGAQYACSLLGHALQRRGASPDLLKQIQQLESHLSLGRKILRLGNSADALESAKRAVHLSDIVLRFCITVSHLNRALYFACDNVLWAGKSGLAPCVDQEKWAQRSFRYYLFSLIMNLSRDAYEIRLLMEQESSACNRRLKGSAGGVPGGLETGGPGGPGTPGRGLPHLALKLRLQVLLLARVLRGHPPLLLDVVRNACDLFIPLDKLGLWRCGPGIVGLCGLVSSILSILTLIYPWLRLKP