Details from NCBI annotation

Gene Symbol Hmgcs2
Gene Name 3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)
Entrez Gene ID 101712063

Database interlinks

Part of NW_004624772.1 (Scaffold)

For more information consult the page for NW_004624772.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

HMGCS2 ENSCPOG00000006339 (Guinea pig)

Gene Details

3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005713, Guinea pig)

Protein Percentage 94.96%
CDS Percentage 92.09%
Ka/Ks Ratio 0.09414 (Ka = 0.0254, Ks = 0.2694)

HMGCS2 ENSG00000134240 (Human)

Gene Details

3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)

External Links

Gene Match (Ensembl Protein ID: ENSP00000358414, Human)

Protein Percentage 88.58%
CDS Percentage 87.86%
Ka/Ks Ratio 0.1579 (Ka = 0.0609, Ks = 0.3859)

Hmgcs2 ENSMUSG00000027875 (Mouse)

Gene Details

3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000088249, Mouse)

Protein Percentage 89.96%
CDS Percentage 87.07%
Ka/Ks Ratio 0.09992 (Ka = 0.0502, Ks = 0.5024)

Hmgcs2 ENSRNOG00000019120 (Rat)

Gene Details

3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial) (Hmgcs2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000026122, Rat)

Protein Percentage 90.35%
CDS Percentage 86.55%
Ka/Ks Ratio 0.08034 (Ka = 0.0465, Ks = 0.5788)

Genome Location

Sequence Coding sequence

Length: 1527 bp    Location: 15432615..15464343   Strand: +
>XM_004853851.1
ATGCAGCGGCTACTGACTCCGGTGCGGCAGGTCCTGCAAGTGAAGAGGGTGATTCGGGAAGCTTCCCTCACACCTGTGCGCCTGCTCCCAGCAGCCCACCAAAGGTTATTTACAATCTCTGCTGCCCCCCTGGCCAAAACAGATACGTGGCCAAAAGATGTGGGCATCCTTGACCTGGAGGTCTACTTCCCAGCCCAATACGTGGACCAAACTGACCTGGAGAAGTACAACAAGGTGGAAGCAGGGAAGTATACAGTGGGCTTGGGTCAGACCCAAATGGGCTTCTGCTCCGTCCAGGAGGACATCAACTCCCTGTGCCTGACGGTAGTGCAACGGCTGATGGAGCGCACAAAGCTCCCATGGGATTCCGTGGGCCGACTGGAAGTCGGCACTGAGACCATCATCGACAAGTCTAAGGCTGTCAAAACGGTGCTCATGGAACTGTTCCAGGAGTCAGGCAACACTGACATTGAGGGCATAGATACCACCAATGCGTGCTATGGTGGCACTGCTTCCCTCTTCAATGCTGCCAACTGGATGGAGTCCAGCTACTGGGATGGTCGCTACGCGCTGGTGGTCTGTGGAGACATTGCAGTGTACCCCAATGGTAATGCGCGCCCCACGGGTGGCGCTGGAGCTGTGGCCATGCTGATTGGGCCTAACGCCCCTCTAGCCCTGGAGCAAGGACTTAGAGGAACCCACATGGAGAATGCCTATGACTTCTACAAACCAAATTTGGCCTCAGAGTACCCGTTGGTGGATGGCAAGCTCTCCATCCAGTGTTACTTCCGGGCCTTGGACAGATGCTACACATCATACCGCCGAAAAATCCAGAATCAGTGGAAGCAAGATGGCATCGACCGACCTTTCACCCTTGACGATATACAGTATATGATCTTTCACACACCCTTTTGCAAGATGGTCCAGAAATCTCTGGCTCGCCTGATGTTCAGTGATTTCCTGTCATCCAGCAGTGCCACACAGAACACCTCATATAAGGGACTGGAGGCCTTCAGGAACCTAAAGCTGGAAGAAACATACACCAACAAGGATGTGGATAAAGCCCTTCTGAAAGCCTCCCTGGACATATTCAACAAGAAGACCAAGGCCTCCCTCTACCTCTCCACACACAACGGGAACATGTACACCTCATCCCTGTATGGCTGTCTGGCCTCGCTTCTGGCACATCACTCTGCTCAAGAATTGGCTGGCTCCAGGATCGGTGCCTTCTCCTATGGCTCTGGCTTAGCAGCAAGTTTGTTCTCATTTCGAGTGTCCCAGGATGCTTCTCCTGGCTCCCCATTGGAGAAGCTGGTGTCTAGTGTATCAGACCTGCCAAAACGTCTGGCCTCCCGGAAGCGTATGTCTCCTGAAGAATTCACAGAAGTAATGAACCAAAGAGAGCAATTCTACCACAAGGTGAATTTCTCACCACCCGGTGACACAAATAACCTTTTCCCGGGTACTTGGTACCTCGAGCGAGTGGACGAGATGCATCGCCGGAAGTATGCCCGGCATCCCATCTAA

Related Sequences

XP_004853908.1 Protein

Hmgcs2 PREDICTED: hydroxymethylglutaryl-CoA synthase, mitochondrial [Heterocephalus glaber]

Length: 508 aa      View alignments
>XP_004853908.1
MQRLLTPVRQVLQVKRVIREASLTPVRLLPAAHQRLFTISAAPLAKTDTWPKDVGILDLEVYFPAQYVDQTDLEKYNKVEAGKYTVGLGQTQMGFCSVQEDINSLCLTVVQRLMERTKLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQESGNTDIEGIDTTNACYGGTASLFNAANWMESSYWDGRYALVVCGDIAVYPNGNARPTGGAGAVAMLIGPNAPLALEQGLRGTHMENAYDFYKPNLASEYPLVDGKLSIQCYFRALDRCYTSYRRKIQNQWKQDGIDRPFTLDDIQYMIFHTPFCKMVQKSLARLMFSDFLSSSSATQNTSYKGLEAFRNLKLEETYTNKDVDKALLKASLDIFNKKTKASLYLSTHNGNMYTSSLYGCLASLLAHHSAQELAGSRIGAFSYGSGLAASLFSFRVSQDASPGSPLEKLVSSVSDLPKRLASRKRMSPEEFTEVMNQREQFYHKVNFSPPGDTNNLFPGTWYLERVDEMHRRKYARHPI