Details from NCBI annotation

Gene Symbol Vangl1
Gene Name VANGL planar cell polarity protein 1, transcript variant X2
Entrez Gene ID 101723140

Database interlinks

Part of NW_004624772.1 (Scaffold)

For more information consult the page for NW_004624772.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

VANGL1 ENSCPOG00000001701 (Guinea pig)

Gene Details

VANGL planar cell polarity protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001535, Guinea pig)

Protein Percentage 93.68%
CDS Percentage 90.68%
Ka/Ks Ratio 0.12389 (Ka = 0.0393, Ks = 0.3175)

VANGL1 ENSG00000173218 (Human)

Gene Details

VANGL planar cell polarity protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000347672, Human)

Protein Percentage 96.18%
CDS Percentage 91.6%
Ka/Ks Ratio 0.0506 (Ka = 0.0178, Ks = 0.3508)

Vangl1 ENSMUSG00000027860 (Mouse)

Gene Details

vang-like 1 (van gogh, Drosophila)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000125043, Mouse)

Protein Percentage 95.8%
CDS Percentage 88.74%
Ka/Ks Ratio 0.03586 (Ka = 0.0195, Ks = 0.5449)

Vangl1 ENSRNOG00000016477 (Rat)

Gene Details

VANGL planar cell polarity protein 1 (Vangl1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000022182, Rat)

Protein Percentage 95.8%
CDS Percentage 88.74%
Ka/Ks Ratio 0.03543 (Ka = 0.0196, Ks = 0.5528)

Genome Location

Sequence Coding sequence

Length: 1575 bp    Location: 11401724..11452852   Strand: +
>XM_004853792.1
ATGGATACCGAATCCACATACTCTGGATATTCATACTATTCAAGCCATTCAAAAAAATCTCACAGACAAGGGGAGAGAACTAGAGAGAGACATAAATCGCCCCGGAATAAAGATGGCAGAGGGTCAGAAAAATCTGTCACCATTCAACCTCCCACTGGAGAGCCCCTGTTGGCAAATGATTCTACTAGGACTGAGGAGGTTCAGGATGACAACTGGGGAGAGACCACCACGGCCATCACAGGCACCTCAGAGCACAGCATATCCCAGGAGGACATTGCCAGGATCAGCAAGGACATGGAGGACAGCGTAGGGCTGGATTGCAGACGCTACTTGGGCCTCACCATTGCCTCGCTCCTTGGACTTCTAGTTTTCCTCACCCCCATTGCCTTCATCCTGTTGCCCCCAATCCTGTGGAGGGAGGAGCTGGAGCCTTGTGGCACAATTTGTGAGGGACTCTTTATTTCTGTGTCATTCAAACTCCTCATTCTGCTCATCGGGACCTGGGCACTTTTCTTCAGAAAGCAGAGAGCAGACATGCCCCGGGTGTTCGTGTTCCGCACTGTTTTGTTGGTCCTCATCTTTCTTTTTGTGGTTTCCTATTGGCTGTTTTATGGAGTCCGCATTTTGGACTCTCGGGACCGAAATTACCAGGGCATCGTGCAATATGCAGTCTCCCTCGTGGATGCCCTCCTTTTCATCCACTACCTGGCCATCGTCCTGCTGGAGCTCAGGCAGCTGCAGCCCATGTTCACACTGCAGGTGGTGCGCTCCACCGATGGGGAATCCCGCCTCTACAGCTTGGGCCACCTGAGTATCCAAAGAGCAGCTTTGGTGGTTCTGGAAAATTACTACAAAGATTTCACCATCTATAACCCAAACCTCCTAACAGCTTCCAAATTCAGAGCAGCCAAACACATGGCCGGGCTGAAAGTATACAATGTCGATGGCCCCAGTAACAATGCCACTGGTCAGTCCCGGGCTATGATTGCTGCAGCCGCCCGGCGCAGGGACTCAAGCCACAATGAGTTGTATTACGAAGAGGCTGAGCATGAGCGTCGGGTAAAGAAGCGGAGAGCAAGGCTGGTGGTGGCCGTGGAAGAAGCATTCATCCATATCCAGCGTCTACAGGCCGAGGAGCAGCAGAAAGCCCCAGGGGAGGTAATGGACCCCAGGGAAGCAGCACAGGCCATCTTCCCATCCATGGCCAGGGCACTCCAGAAGTACCTGCGAACCACTCGGCAGCAGCACTACCACAGCATGGAGAGCATCCTGCAGCACCTGGCCTTCTGCATCACCAACAGCATGACCCCCAAGGCCTTCCTAGAACGATACCTCAGTGCAGGCCCCACCTTGCAGTATGACAAGGACCGCTGGCTCTCTACGCAGTGGAGACTTATCAGTGAGGAGGCTGTGACTAACGGGTTACAGGACGGAACTGTTTTTGTCCTTAAATGCTTGGACTTCAGCCTCATTGTCAATGTGAAGAAAATTCCATTCATCATCCTCTCTGAAGAGTTTATAGACCCCAAGTCTCACAAGTTTGTCCTTCGCTTACAGTCTGAGACATCAGTTTAA

Related Sequences

XP_004853849.1 Protein

Vangl1 PREDICTED: vang-like protein 1 isoform X2 [Heterocephalus glaber]

Length: 524 aa      View alignments
>XP_004853849.1
MDTESTYSGYSYYSSHSKKSHRQGERTRERHKSPRNKDGRGSEKSVTIQPPTGEPLLANDSTRTEEVQDDNWGETTTAITGTSEHSISQEDIARISKDMEDSVGLDCRRYLGLTIASLLGLLVFLTPIAFILLPPILWREELEPCGTICEGLFISVSFKLLILLIGTWALFFRKQRADMPRVFVFRTVLLVLIFLFVVSYWLFYGVRILDSRDRNYQGIVQYAVSLVDALLFIHYLAIVLLELRQLQPMFTLQVVRSTDGESRLYSLGHLSIQRAALVVLENYYKDFTIYNPNLLTASKFRAAKHMAGLKVYNVDGPSNNATGQSRAMIAAAARRRDSSHNELYYEEAEHERRVKKRRARLVVAVEEAFIHIQRLQAEEQQKAPGEVMDPREAAQAIFPSMARALQKYLRTTRQQHYHSMESILQHLAFCITNSMTPKAFLERYLSAGPTLQYDKDRWLSTQWRLISEEAVTNGLQDGTVFVLKCLDFSLIVNVKKIPFIILSEEFIDPKSHKFVLRLQSETSV